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Carg26293 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26293
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionsuccinate dehydrogenase assembly factor 1, mitochondrial
Genome locationCarg_Chr01:5140584..5140934
RNA-Seq ExpressionCarg26293
SyntenyCarg26293
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607523.1 Succinate dehydrogenase assembly factor 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]3.6e-3373.28Show/hide
Query:  MFKRCREYREKQLPSRSSMGVSSAPKLSGMQKQ------------------------------FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVG
        MFKRCREYREKQLPSRSSMGVSSAPKLSGMQKQ                              FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVG
Subjt:  MFKRCREYREKQLPSRSSMGVSSAPKLSGMQKQ------------------------------FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVG

Query:  LSTLTLNSSPTQDSEH
        LSTLTLNS PTQDSEH
Subjt:  LSTLTLNSSPTQDSEH

KAG7037165.1 hypothetical protein SDJN02_00787, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-38100Show/hide
Query:  MFKRCREYREKQLPSRSSMGVSSAPKLSGMQKQFRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVGLSTLTLNSSPTQDSEH
        MFKRCREYREKQLPSRSSMGVSSAPKLSGMQKQFRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVGLSTLTLNSSPTQDSEH
Subjt:  MFKRCREYREKQLPSRSSMGVSSAPKLSGMQKQFRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVGLSTLTLNSSPTQDSEH

XP_022932494.1 LOW QUALITY PROTEIN: succinate dehydrogenase assembly factor 1, mitochondrial [Cucurbita moschata]7.3e-3474.14Show/hide
Query:  MFKRCREYREKQLPSRSSMGVSSAPKLSGMQKQ------------------------------FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVG
        MFKRCREYREKQLPSRSSMGVSSAPKLSGMQKQ                              FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVG
Subjt:  MFKRCREYREKQLPSRSSMGVSSAPKLSGMQKQ------------------------------FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVG

Query:  LSTLTLNSSPTQDSEH
        LSTLTLNSSPTQDSEH
Subjt:  LSTLTLNSSPTQDSEH

XP_022973401.1 succinate dehydrogenase assembly factor 1, mitochondrial [Cucurbita maxima]1.3e-2767.83Show/hide
Query:  MFKRCREYREKQLPSRSSMGVSSAPKLSGMQKQ------------------------------FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVG
        MFKR REYREKQL SRSSMGVSSAPKLSGMQ Q                              FRRNAKLID K+FIYIEYLLRRG+KQLDQLRSPATVG
Subjt:  MFKRCREYREKQLPSRSSMGVSSAPKLSGMQKQ------------------------------FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVG

Query:  LSTLTLNSSPTQDSE
        LS+LTLNSSPTQDSE
Subjt:  LSTLTLNSSPTQDSE

XP_023525064.1 succinate dehydrogenase assembly factor 1, mitochondrial [Cucurbita pepo subsp. pepo]5.8e-3170.43Show/hide
Query:  MFKRCREYREKQLPSRSSMGVSSAPKLSGMQKQ------------------------------FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVG
        MFKRCREYREKQLP RSSMGVSSAPKLSGMQ+Q                              FRRNAKLIDRK+FIYIEYLLRRGNKQLDQLRSPATVG
Subjt:  MFKRCREYREKQLPSRSSMGVSSAPKLSGMQKQ------------------------------FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVG

Query:  LSTLTLNSSPTQDSE
        LS+LTLNSSPTQDSE
Subjt:  LSTLTLNSSPTQDSE

TrEMBL top hitse value%identityAlignment
A0A6J1EX50 LOW QUALITY PROTEIN: succinate dehydrogenase assembly factor 1, mitochondrial3.5e-3474.14Show/hide
Query:  MFKRCREYREKQLPSRSSMGVSSAPKLSGMQKQ------------------------------FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVG
        MFKRCREYREKQLPSRSSMGVSSAPKLSGMQKQ                              FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVG
Subjt:  MFKRCREYREKQLPSRSSMGVSSAPKLSGMQKQ------------------------------FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVG

Query:  LSTLTLNSSPTQDSEH
        LSTLTLNSSPTQDSEH
Subjt:  LSTLTLNSSPTQDSEH

A0A6J1I7F5 succinate dehydrogenase assembly factor 1, mitochondrial6.5e-2867.83Show/hide
Query:  MFKRCREYREKQLPSRSSMGVSSAPKLSGMQKQ------------------------------FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVG
        MFKR REYREKQL SRSSMGVSSAPKLSGMQ Q                              FRRNAKLID K+FIYIEYLLRRG+KQLDQLRSPATVG
Subjt:  MFKRCREYREKQLPSRSSMGVSSAPKLSGMQKQ------------------------------FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVG

Query:  LSTLTLNSSPTQDSE
        LS+LTLNSSPTQDSE
Subjt:  LSTLTLNSSPTQDSE

A0A7C8YJB1 Uncharacterized protein1.2e-1346.15Show/hide
Query:  KQLPSRSSMGVSSAPKLSGMQKQ------------------------------FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVGLSTLTLNSSP
        K+LP  ++MG SS P+LSGMQKQ                              FRRN+K +DRK+F+YIEYLLRRG KQLDQL+SP  V LS++ ++ +P
Subjt:  KQLPSRSSMGVSSAPKLSGMQKQ------------------------------FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVGLSTLTLNSSP

Query:  TQDS
        T+DS
Subjt:  TQDS

A0A7C8YJU0 Uncharacterized protein (Fragment)4.5e-1345.19Show/hide
Query:  KQLPSRSSMGVSSAPKLSGMQKQ------------------------------FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVGLSTLTLNSSP
        K+LP  ++MG SS P+LSGMQKQ                              FRR++K +DRK+F+YIEYLLRRG KQLDQL+SP  V LS++ ++ +P
Subjt:  KQLPSRSSMGVSSAPKLSGMQKQ------------------------------FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVGLSTLTLNSSP

Query:  TQDS
        T+DS
Subjt:  TQDS

A0A7J7CXN8 LYR family of Fe/S cluster biogenesis protein isoform 13.4e-1347.96Show/hide
Query:  MGVSSAPKLSGMQKQ------------------------------FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVGLSTLTLNSSPTQDSEH
        MG S AP+LSGMQKQ                              FR N+K +DRK+F+YIEYLLRRG KQLDQL+SP TVG+S+L ++SS   DS+H
Subjt:  MGVSSAPKLSGMQKQ------------------------------FRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVGLSTLTLNSSPTQDSEH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G39725.1 LYR family of Fe/S cluster biogenesis protein3.5e-1061.22Show/hide
Query:  QFRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVGLSTLTLNSSPT
        +FR N+K +DRK+F YIEYLLR G KQLDQL+SPA V LS++ + +S T
Subjt:  QFRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVGLSTLTLNSSPT

AT2G39725.2 LYR family of Fe/S cluster biogenesis protein3.5e-1061.22Show/hide
Query:  QFRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVGLSTLTLNSSPT
        +FR N+K +DRK+F YIEYLLR G KQLDQL+SPA V LS++ + +S T
Subjt:  QFRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVGLSTLTLNSSPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAAGCGGTGCCGAGAATATCGAGAGAAGCAACTACCTAGTAGAAGCTCAATGGGGGTTTCATCGGCGCCGAAGCTCTCAGGGATGCAAAAGCAATTCCGCCGGAA
CGCCAAGCTAATCGATCGCAAGGATTTCATCTACATCGAGTACCTTCTTCGTCGAGGTAACAAACAATTGGATCAACTTAGAAGCCCTGCAACTGTTGGATTGTCAACGC
TCACTCTCAATTCGTCTCCAACGCAAGATTCTGAGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAAGCGGTGCCGAGAATATCGAGAGAAGCAACTACCTAGTAGAAGCTCAATGGGGGTTTCATCGGCGCCGAAGCTCTCAGGGATGCAAAAGCAATTCCGCCGGAA
CGCCAAGCTAATCGATCGCAAGGATTTCATCTACATCGAGTACCTTCTTCGTCGAGGTAACAAACAATTGGATCAACTTAGAAGCCCTGCAACTGTTGGATTGTCAACGC
TCACTCTCAATTCGTCTCCAACGCAAGATTCTGAGCATTGA
Protein sequenceShow/hide protein sequence
MFKRCREYREKQLPSRSSMGVSSAPKLSGMQKQFRRNAKLIDRKDFIYIEYLLRRGNKQLDQLRSPATVGLSTLTLNSSPTQDSEH