; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg26323 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26323
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionVQ domain-containing protein
Genome locationCarg_Chr03:10170794..10171324
RNA-Seq ExpressionCarg26323
SyntenyCarg26323
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039609 - VQ motif-containing protein 15/22


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581510.1 hypothetical protein SDJN03_21512, partial [Cucurbita argyrosperma subsp. sororia]1.2e-94100Show/hide
Query:  MSISSSSDQWRAQFYTHGGAPSSTAVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFHN
        MSISSSSDQWRAQFYTHGGAPSSTAVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFHN
Subjt:  MSISSSSDQWRAQFYTHGGAPSSTAVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFHN

Query:  NHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGNGYLA
        NHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGNGYLA
Subjt:  NHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGNGYLA

XP_008441071.1 PREDICTED: uncharacterized protein LOC103485295 [Cucumis melo]3.5e-5971.75Show/hide
Query:  ISSSSDQWRAQFY---THGGAPSSTAVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD
        +S +SDQW  QFY   +HGGA +S+AV    P   N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGFHAAGA +P GSHKGPVNLSFGQ GD
Subjt:  ISSSSDQWRAQFY---THGGAPSSTAVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD

Query:  E-FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGN
        +  HNNHPSVMLPFSDGR  Q R+ P E   P+   + GFS   AELMEI+NLIDEDL+YDL+ELGMEF SSSGNGN
Subjt:  E-FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGN

XP_022977817.1 uncharacterized protein LOC111478005 isoform X1 [Cucurbita maxima]1.4e-8795.45Show/hide
Query:  MSI-SSSSDQWRAQFYTHGGAPSSTAVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFH
        MSI SSSSDQWRAQFYTHGGAPSST VPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSH+GPVNLSFGQAGDEFH
Subjt:  MSI-SSSSDQWRAQFYTHGGAPSSTAVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFH

Query:  NNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGNGYL
        NNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRG SGA AELMEIQNLIDEDLNYDLEELGMEFC S  NGNGYL
Subjt:  NNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGNGYL

XP_023544848.1 uncharacterized protein LOC111804320 [Cucurbita pepo subsp. pepo]2.5e-8996Show/hide
Query:  MSISSSSDQWRAQFYTHGGAPSSTAVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFHN
        MSISSSSDQWRAQFYT GGAPSST VPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFHN
Subjt:  MSISSSSDQWRAQFYTHGGAPSSTAVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFHN

Query:  NHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGNGYL
        NHPSVMLPFSDGRHFQLR+TPREHGVPIPQG RGF GAAAELMEIQNLIDEDLNYDLEELGMEF SS+GNGNGYL
Subjt:  NHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGNGYL

XP_038881626.1 VQ motif-containing protein 22-like [Benincasa hispida]3.4e-6276Show/hide
Query:  ISSSSDQWRAQFY--THGGAPSSTAVPRDAP--NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDE-
        +S +SDQW +QFY   HGGA  S+A     P  N NSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGF AAGA +P GSHKGPVNLSFGQAGD+ 
Subjt:  ISSSSDQWRAQFY--THGGAPSSTAVPRDAP--NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDE-

Query:  FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGN
         HNNH SVMLPFSDG+ FQLR+T  EH  PIP  N GFS  AAELMEIQNLIDED NYDL+ELGMEF SSSGNGN
Subjt:  FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGN

TrEMBL top hitse value%identityAlignment
A0A0A0KII5 VQ domain-containing protein2.2e-5972.38Show/hide
Query:  ISSSSDQWRAQFY---THGGAPSSTAVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD
        +S +SDQW  QFY   +HGG  +S+AV    P   N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGFHAAGA +P GSHKGPVNLSFGQ GD
Subjt:  ISSSSDQWRAQFY---THGGAPSSTAVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD

Query:  E-FHNNHPSVMLPFSDGRHFQLRE--TPREHGVPIPQGNRGFS--GAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGN
        +  HNNHPSVMLPFSDG   Q R+  TP EH  P+P  + GFS  GAA +LMEIQNLIDEDL+YDL+ELGMEFCSSSGNGN
Subjt:  E-FHNNHPSVMLPFSDGRHFQLRE--TPREHGVPIPQGNRGFS--GAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGN

A0A1S3B3C3 uncharacterized protein LOC1034852951.7e-5971.75Show/hide
Query:  ISSSSDQWRAQFY---THGGAPSSTAVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD
        +S +SDQW  QFY   +HGGA +S+AV    P   N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGFHAAGA +P GSHKGPVNLSFGQ GD
Subjt:  ISSSSDQWRAQFY---THGGAPSSTAVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD

Query:  E-FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGN
        +  HNNHPSVMLPFSDGR  Q R+ P E   P+   + GFS   AELMEI+NLIDEDL+YDL+ELGMEF SSSGNGN
Subjt:  E-FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGN

A0A5D3CPL3 VQ domain-containing protein5.0e-5971.19Show/hide
Query:  ISSSSDQWRAQFY---THGGAPSSTAVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD
        +S +SDQW  QFY   +HG A +S+AV    P   N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGFHAAGA +P GSHKGPVNLSFGQ GD
Subjt:  ISSSSDQWRAQFY---THGGAPSSTAVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD

Query:  E-FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGN
        +  HNNHPSVMLPFSDGR  Q R+ P E   P+   + GFS   AELMEI+NLIDEDL+YDL+ELGMEF SSSGNGN
Subjt:  E-FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGN

A0A6J1IJI1 uncharacterized protein LOC111478005 isoform X16.7e-8895.45Show/hide
Query:  MSI-SSSSDQWRAQFYTHGGAPSSTAVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFH
        MSI SSSSDQWRAQFYTHGGAPSST VPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSH+GPVNLSFGQAGDEFH
Subjt:  MSI-SSSSDQWRAQFYTHGGAPSSTAVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFH

Query:  NNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGNGYL
        NNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRG SGA AELMEIQNLIDEDLNYDLEELGMEFC S  NGNGYL
Subjt:  NNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGNGYL

E5GCL8 VQ domain-containing protein1.7e-5971.75Show/hide
Query:  ISSSSDQWRAQFY---THGGAPSSTAVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD
        +S +SDQW  QFY   +HGGA +S+AV    P   N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGFHAAGA +P GSHKGPVNLSFGQ GD
Subjt:  ISSSSDQWRAQFY---THGGAPSSTAVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD

Query:  E-FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGN
        +  HNNHPSVMLPFSDGR  Q R+ P E   P+   + GFS   AELMEI+NLIDEDL+YDL+ELGMEF SSSGNGN
Subjt:  E-FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGN

SwissProt top hitse value%identityAlignment
Q9LIE6 VQ motif-containing protein 226.2e-0657.14Show/hide
Query:  RDAPNNNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGS
        R +P    ++KP RRRSRASR+ PTTLLN  T+NFR +VQQ+TG  +A A   FGS
Subjt:  RDAPNNNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGS

Arabidopsis top hitse value%identityAlignment
AT1G35830.1 VQ motif-containing protein4.4e-0746.77Show/hide
Query:  PSSTAVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGS
        P     P   P  +S   PR+R+RASR+APTT+L   T+NFR +VQ+FTG  A+    PF S
Subjt:  PSSTAVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGS

AT3G22160.1 VQ motif-containing protein4.4e-0757.14Show/hide
Query:  RDAPNNNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGS
        R +P    ++KP RRRSRASR+ PTTLLN  T+NFR +VQQ+TG  +A A   FGS
Subjt:  RDAPNNNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGS

AT4G15120.1 VQ motif-containing protein3.0e-0843.62Show/hide
Query:  ISSSSDQWRAQFYTHG----------GAPSSTAVPRD---APNNNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGS
        +++S++ W +QFY +              ++TA   D   +P+N  ++KP RRRSRASR+ PTTL N  TANFR +VQQFTG  +A   V FGS
Subjt:  ISSSSDQWRAQFYTHG----------GAPSSTAVPRD---APNNNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGS

AT4G20000.1 VQ motif-containing protein2.0e-0762.26Show/hide
Query:  RRSRASRKA-PTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFG
        RRSRASR+A PTTLLNA+ +NFR LVQ+FTG  A G        KGPV L FG
Subjt:  RRSRASRKA-PTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFG

AT4G39720.1 VQ motif-containing protein3.7e-0635.71Show/hide
Query:  SSTAVPRDAPNNN--SISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVN-------LSFGQAGDEFHNNHPSVMLPFS
        +S+A     P NN   I K ++RSRASR+APTT+L   T+NFR +VQ+FTG  A     P  ++   VN       L    +    +N +  ++ PF+
Subjt:  SSTAVPRDAPNNN--SISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVN-------LSFGQAGDEFHNNHPSVMLPFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATCAGCAGCAGCAGCGATCAGTGGAGGGCCCAATTCTACACCCACGGCGGCGCGCCTTCCTCTACCGCTGTCCCACGCGACGCTCCCAATAACAACTCCATTTC
CAAGCCCAGACGCCGCTCCAGGGCTTCGCGGAAGGCGCCGACCACGCTGCTCAACGCCAGCACCGCCAATTTCAGGGACTTGGTGCAGCAGTTCACGGGGTTTCATGCCG
CCGGCGCCGTCGTGCCTTTCGGCAGCCACAAGGGTCCGGTCAACCTCAGCTTCGGGCAGGCTGGAGATGAGTTCCATAACAACCACCCCTCTGTGATGCTCCCTTTCTCG
GATGGGCGCCATTTTCAGCTCCGTGAGACGCCGAGGGAGCACGGGGTCCCCATCCCGCAGGGGAATCGTGGGTTTTCAGGGGCGGCGGCGGAACTCATGGAAATTCAAAA
TCTGATTGATGAGGATTTGAATTACGATCTGGAGGAATTGGGTATGGAGTTCTGTTCTTCCAGTGGGAATGGGAATGGGTACTTGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTATCAGCAGCAGCAGCGATCAGTGGAGGGCCCAATTCTACACCCACGGCGGCGCGCCTTCCTCTACCGCTGTCCCACGCGACGCTCCCAATAACAACTCCATTTC
CAAGCCCAGACGCCGCTCCAGGGCTTCGCGGAAGGCGCCGACCACGCTGCTCAACGCCAGCACCGCCAATTTCAGGGACTTGGTGCAGCAGTTCACGGGGTTTCATGCCG
CCGGCGCCGTCGTGCCTTTCGGCAGCCACAAGGGTCCGGTCAACCTCAGCTTCGGGCAGGCTGGAGATGAGTTCCATAACAACCACCCCTCTGTGATGCTCCCTTTCTCG
GATGGGCGCCATTTTCAGCTCCGTGAGACGCCGAGGGAGCACGGGGTCCCCATCCCGCAGGGGAATCGTGGGTTTTCAGGGGCGGCGGCGGAACTCATGGAAATTCAAAA
TCTGATTGATGAGGATTTGAATTACGATCTGGAGGAATTGGGTATGGAGTTCTGTTCTTCCAGTGGGAATGGGAATGGGTACTTGGCTTGA
Protein sequenceShow/hide protein sequence
MSISSSSDQWRAQFYTHGGAPSSTAVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFHNNHPSVMLPFS
DGRHFQLRETPREHGVPIPQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGNGYLA