CuGenDBv2

Gene ID	Carg26327
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Vacuolar ATPase assembly integral membrane protein VMA21 homolog
Genome location	Carg_Chr03:10160240..10162663
RNA-Seq Expression	Carg26327
Synteny	Carg26327
Gene Ontology terms	GO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0012507 - ER to Golgi transport vesicle membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0033116 - endoplasmic reticulum-Golgi intermediate compartment membrane (cellular component)
InterPro domains	IPR019013 - Vacuolar ATPase assembly integral membrane protein Vma21

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0052446.1 hypothetical protein E6C27_scaffold120G00430 [Cucumis melo var. makuwa]

5.8e-41

88.68

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Query:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA
        MA VITKFFIASLFMWITPI LL+GFNHN IPGST+LNPHSLTLLSGFLAVISVNVVI IYIIMAMKEPSSKHEPDPAF+AEAKASINQS GKA+ PS+A
Subjt:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA

Query:  NNKKEE
        +NKKEE
Subjt:  NNKKEE

XP_004134542.1 uncharacterized protein LOC101206493 [Cucumis sativus]

5.8e-41

89.62

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Query:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA
        MA VI KFFIASLFMWITPI LL+GFNHN IPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDP F+AEAKASINQS GKA+ PSQA
Subjt:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA

Query:  NNKKEE
         NKKEE
Subjt:  NNKKEE

XP_022926009.1 uncharacterized protein LOC111433255 [Cucurbita moschata]

8.4e-48

100

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Query:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA
        MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA
Subjt:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA

Query:  NNKKEE
        NNKKEE
Subjt:  NNKKEE

XP_022977993.1 uncharacterized protein LOC111478118 [Cucurbita maxima]

7.1e-47

98.11

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Query:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA
        MAGVITKFFIASLFMWITPIILLYGFNHNLIPGST LNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQ+PGKAEDPSQA
Subjt:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA

Query:  NNKKEE
        NNKKEE
Subjt:  NNKKEE

XP_038882777.1 protein SUPPRESSOR OF FRI 4-like isoform X1 [Benincasa hispida]

1.8e-42

91.51

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Query:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA
        MA VITKFFIASLFMWITPI LLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAF+ EAKASINQS GK  +PSQA
Subjt:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA

Query:  NNKKEE
        +NKKEE
Subjt:  NNKKEE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPB7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

2.8e-41

89.62

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Query:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA
        MA VI KFFIASLFMWITPI LL+GFNHN IPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDP F+AEAKASINQS GKA+ PSQA
Subjt:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA

Query:  NNKKEE
         NKKEE
Subjt:  NNKKEE

A0A1S4DTT6 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

2.8e-41

88.68

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Query:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA
        MA VITKFFIASLFMWITPI LL+GFNHN IPGST+LNPHSLTLLSGFLAVISVNVVI IYIIMAMKEPSSKHEPDPAF+AEAKASINQS GKA+ PS+A
Subjt:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA

Query:  NNKKEE
        +NKKEE
Subjt:  NNKKEE

A0A5A7UE48 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

2.8e-41

88.68

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Query:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA
        MA VITKFFIASLFMWITPI LL+GFNHN IPGST+LNPHSLTLLSGFLAVISVNVVI IYIIMAMKEPSSKHEPDPAF+AEAKASINQS GKA+ PS+A
Subjt:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA

Query:  NNKKEE
        +NKKEE
Subjt:  NNKKEE

A0A6J1EJT7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

4.1e-48

100

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Query:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA
        MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA
Subjt:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA

Query:  NNKKEE
        NNKKEE
Subjt:  NNKKEE

A0A6J1ISV9 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

3.4e-47

98.11

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Query:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA
        MAGVITKFFIASLFMWITPIILLYGFNHNLIPGST LNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQ+PGKAEDPSQA
Subjt:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA

Query:  NNKKEE
        NNKKEE
Subjt:  NNKKEE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G05780.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain

2.9e-30

64.15

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Query:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA
        MAGV+ KF IAS+FMWI P+ +LYGFNHNL+PGST L+PHSL LLSGFLAV+SVN VI  YI MAMKEP+ KH+PD AF+AEAK S+N+    A      
Subjt:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA

Query:  NNKKEE
          KK+E
Subjt:  NNKKEE

AT2G31710.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain

5.5e-29

61.9

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Query:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA
        MAGV+ KF IAS+FMWI PI +LYGFN++L+PGST L+PHSLTLLSGFLAV+SVNVVI  YI +A+KEP+ KH+PD +FVAEAK S+ +      +   A
Subjt:  MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQA

Query:  NNKKE
          K+E
Subjt:  NNKKE

Sequences

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CDS sequence

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ATGGCAGGCGTCATTACGAAGTTCTTCATTGCATCACTGTTTATGTGGATAACTCCCATCATATTGTTGTATGGTTTTAACCACAATTTGATTCCTGGTTCAACACAATT
GAATCCGCATTCTCTTACACTCTTGAGTGGATTCCTTGCTGTCATATCAGTCAATGTTGTCATTGCTATTTATATTATCATGGCAATGAAAGAACCCTCTAGTAAACATG
AACCGGATCCTGCATTTGTTGCCGAGGCAAAAGCTAGTATAAACCAGTCTCCTGGGAAAGCAGAGGACCCCTCACAGGCCAATAATAAGAAGGAAGAATAG

mRNA sequence

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TTTTGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCGACGCCTCCTCTTCCCTTCTTCCACTTCCAAATCTCCTAACCTCGACACCATCTCCATTTCTCT
CGTCAGAACCTCAAATCGCTCACCTTTCTCGCGACTGCACTTGAAGAAGCCGCAATTCCGAACTTCGAAGCCCTAATTCGTGCTCCCAACCTGCCATCTAGCACCAATGG
CAGGCGTCATTACGAAGTTCTTCATTGCATCACTGTTTATGTGGATAACTCCCATCATATTGTTGTATGGTTTTAACCACAATTTGATTCCTGGTTCAACACAATTGAAT
CCGCATTCTCTTACACTCTTGAGTGGATTCCTTGCTGTCATATCAGTCAATGTTGTCATTGCTATTTATATTATCATGGCAATGAAAGAACCCTCTAGTAAACATGAACC
GGATCCTGCATTTGTTGCCGAGGCAAAAGCTAGTATAAACCAGTCTCCTGGGAAAGCAGAGGACCCCTCACAGGCCAATAATAAGAAGGAAGAATAGGAAATGAGAGAGG
GAGGCTCTGATGAGCTTAACCTTTCCAGGATTTCAGATGATAATGTCTCATGTGTGGTCAGACTGTCTGCTTGTCAATTGAGACTTGGTTTCTTTTCTTTGCTTCTAATG
ATGTTATACTTGAAGAGGAGATGTAATATTTGTTGGTTGGGGAGAATTAGAATAAATTTTAGATTCTTGTATTTCTGGCTTCATAGTTAGAACTTTATAACATAATCCCG
ATGGTTTCAATCTCTTCATAGTCCAAGGAAAGACACCATTTAACAAGAAGGACACCTTCGAACATCAGATTTAGAACCTCATCCTTTGGCTACCACCAAGGGTTGGTTTG
TAGAACTTTGTAGGGGGTTCCTTCCGGTAGTTGGGACATGCTCTTGCTCTAAAATGTGAAAAACCCTATTTACCCTAATTCATACTTCATAACTGACCAAACCCTCTTGC
GATTTAA

Protein sequence

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MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE

Carg26327 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome