; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg26350 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26350
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr15:5443199..5443681
RNA-Seq ExpressionCarg26350
SyntenyCarg26350
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579243.1 hypothetical protein SDJN03_23691, partial [Cucurbita argyrosperma subsp. sororia]4.2e-7598.12Show/hide
Query:  MKSISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSD
        MKSISSANSAPFLHFHPI SSSSRRRRRRPPLFTVMASSRGAD  SNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSD
Subjt:  MKSISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSD

Query:  YDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
        YDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Subjt:  YDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT

KAG7016757.1 hypothetical protein SDJN02_21867, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-79100Show/hide
Query:  MKSISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSD
        MKSISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSD
Subjt:  MKSISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSD

Query:  YDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
        YDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Subjt:  YDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT

XP_022939420.1 uncharacterized protein LOC111445338 [Cucurbita moschata]1.5e-7295.62Show/hide
Query:  MKSISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSD
        MKSISSANSAPFLHFHPISSSS  RRRRRPPLFTVMASSRGADSNS    +NNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSD
Subjt:  MKSISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSD

Query:  YDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
        YDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Subjt:  YDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT

XP_022993164.1 uncharacterized protein LOC111489262 [Cucurbita maxima]2.4e-7093.12Show/hide
Query:  MKSISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSD
        MKSISSANSAPFLHFHPIS SS  RRRRR PLFTV+ASSRGAD  S+S+NNNNNNYYASGKLVDESMIVLRKRIHEIKMVE+SHEPPSDWLDWEKRCYSD
Subjt:  MKSISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSD

Query:  YDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
        YDSHICEALGYLQSHLMNTRPSV+LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Subjt:  YDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT

XP_023551441.1 uncharacterized protein LOC111809250 [Cucurbita pepo subsp. pepo]2.3e-5796Show/hide
Query:  MASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVALGILLLITLSV
        MASSRGADS+S++NNNNNNNYYASGKLVDESMIVLRKRIHE+KMVERSHEPPS+WLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVALGILLLITLSV
Subjt:  MASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVALGILLLITLSV

Query:  PLSSAVILHRFIDIAAALLAGVRLT
        PLSSAVILHRFIDIAAALLAGVRLT
Subjt:  PLSSAVILHRFIDIAAALLAGVRLT

TrEMBL top hitse value%identityAlignment
A0A0A0KPI5 Uncharacterized protein7.5e-4668.83Show/hide
Query:  ISSANSAPFLHFHPISSSSSRRRRRRP-PLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYD
        + S NS  F      S ++    RR+P P  TV AS   A  ++N+N NNNNNYYA GK+VDESMIVLRKRIHEIKM E+  EPP+DWLDWEKR YSDYD
Subjt:  ISSANSAPFLHFHPISSSSSRRRRRRP-PLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYD

Query:  SHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAG
        SHICEALGYLQSHLMNTRPSVALG+LLLI +SVPLSSA++LHRF+ IA ALLAG
Subjt:  SHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAG

A0A6J1FMN3 uncharacterized protein LOC1114453387.2e-7395.62Show/hide
Query:  MKSISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSD
        MKSISSANSAPFLHFHPISSSS  RRRRRPPLFTVMASSRGADSNS    +NNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSD
Subjt:  MKSISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSD

Query:  YDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
        YDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Subjt:  YDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT

A0A6J1GM73 uncharacterized protein LOC1114552461.2e-4870.7Show/hide
Query:  SISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYD
        SI S +SAP L F PI S S+ RRRRRPP FTV ASS+  +        ++N+YYA GKLVDESMIVLRKRIHEIK  E++H+PP DW DWEKRCYS+YD
Subjt:  SISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYD

Query:  SHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRL
        S+ICEALGYLQSHLMNTRPSVALG+L L+TLSVP+SSAV+LHRFI+IA  LLAG+RL
Subjt:  SHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRL

A0A6J1JRY7 uncharacterized protein LOC1114870161.2e-4871.34Show/hide
Query:  SISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYD
        SI S +SAP L F PI S SS RRRR PP FTV ASSR  +        ++N+YYA GKLVDESMIVLRKRIHEIK  E++H+PP DW DWEKRCYS+YD
Subjt:  SISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYD

Query:  SHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRL
        S+ICEALGYLQSHLMNTRPSVALG+L L+TLSVP+SSAV+LHRFI+IA  LLAG+RL
Subjt:  SHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRL

A0A6J1JZG1 uncharacterized protein LOC1114892621.1e-7093.12Show/hide
Query:  MKSISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSD
        MKSISSANSAPFLHFHPIS SS  RRRRR PLFTV+ASSRGAD  S+S+NNNNNNYYASGKLVDESMIVLRKRIHEIKMVE+SHEPPSDWLDWEKRCYSD
Subjt:  MKSISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSD

Query:  YDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
        YDSHICEALGYLQSHLMNTRPSV+LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Subjt:  YDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15010.1 unknown protein6.3e-2959.05Show/hide
Query:  NYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALL
        +YY  G+ VDE+M+VLRKRIHE+KMVER+ EPPS W+ WEKR Y +YD+ IC+AL  LQ+ LMN+RPSVA G  LL+ +SVP+SSAV   R +D+A  LL
Subjt:  NYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALL

Query:  AGVRL
          V +
Subjt:  AGVRL

AT2G01300.1 unknown protein6.7e-3149.67Show/hide
Query:  SSANSAPFLHFHP--ISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYD
        SS  S   L FHP  +S  +   ++++  +    A+S G D           +YY  G+LVDE+MIVLRKRIHE+KMVER++EPPS W+DWEKR Y+ YD
Subjt:  SSANSAPFLHFHP--ISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYD

Query:  SHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLA
        S IC+++G LQS LMN+RP+VA+  LL + +SVP+SS VI  R ID+   LLA
Subjt:  SHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCAATCTCCTCCGCCAATTCCGCTCCCTTCCTCCACTTCCATCCCATCTCCTCCTCCTCCTCTCGCCGCCGCCGCCGCCGGCCACCACTCTTCACTGTAATGGC
CTCATCAAGAGGAGCCGACAGCAACAGCAACAGCAACAACAATAACAACAATAACTACTATGCGAGCGGGAAGCTTGTGGACGAGAGCATGATCGTACTCCGGAAACGGA
TCCACGAAATCAAGATGGTCGAGCGGAGCCACGAACCCCCTTCCGATTGGCTCGACTGGGAGAAACGCTGCTACTCCGACTATGATTCACATATCTGTGAGGCTTTGGGC
TATCTCCAATCCCACTTGATGAACACCAGGCCTAGCGTTGCCTTGGGAATTCTCCTTCTTATTACTCTCAGTGTTCCTCTCTCCTCCGCAGTCATTCTCCACCGCTTCAT
CGACATCGCCGCCGCGCTTCTCGCCGGAGTCCGTCTTACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCAATCTCCTCCGCCAATTCCGCTCCCTTCCTCCACTTCCATCCCATCTCCTCCTCCTCCTCTCGCCGCCGCCGCCGCCGGCCACCACTCTTCACTGTAATGGC
CTCATCAAGAGGAGCCGACAGCAACAGCAACAGCAACAACAATAACAACAATAACTACTATGCGAGCGGGAAGCTTGTGGACGAGAGCATGATCGTACTCCGGAAACGGA
TCCACGAAATCAAGATGGTCGAGCGGAGCCACGAACCCCCTTCCGATTGGCTCGACTGGGAGAAACGCTGCTACTCCGACTATGATTCACATATCTGTGAGGCTTTGGGC
TATCTCCAATCCCACTTGATGAACACCAGGCCTAGCGTTGCCTTGGGAATTCTCCTTCTTATTACTCTCAGTGTTCCTCTCTCCTCCGCAGTCATTCTCCACCGCTTCAT
CGACATCGCCGCCGCGCTTCTCGCCGGAGTCCGTCTTACTTAA
Protein sequenceShow/hide protein sequence
MKSISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASGKLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYDSHICEALG
YLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT