; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg26367 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26367
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionsignal recognition particle 43 kDa protein, chloroplastic-like
Genome locationCarg_Chr11:11397919..11398950
RNA-Seq ExpressionCarg26367
SyntenyCarg26367
Gene Ontology termsGO:0009644 - response to high light intensity (biological process)
GO:0045038 - protein import into chloroplast thylakoid membrane (biological process)
GO:0070208 - protein heterotrimerization (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0080085 - signal recognition particle, chloroplast targeting (cellular component)
GO:0030674 - protein binding, bridging (molecular function)
GO:0042802 - identical protein binding (molecular function)
GO:0097718 - disordered domain specific binding (molecular function)
InterPro domainsIPR000953 - Chromo/chromo shadow domain
IPR002110 - Ankyrin repeat
IPR016197 - Chromo-like domain superfamily
IPR020683 - Ankyrin repeat-containing domain
IPR030300 - Signal recognition particle 43kDa protein
IPR036770 - Ankyrin repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589032.1 Signal recognition particle 43 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]7.1e-18998.54Show/hide
Query:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHS
        MDAVFVNQSLSRLKLPPKP     PLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHS
Subjt:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHS

Query:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPG
        PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPG
Subjt:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPG

Query:  TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA
        TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA
Subjt:  TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA

Query:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG
        DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG
Subjt:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG

KAG7022747.1 Signal recognition particle 43 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-193100Show/hide
Query:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHS
        MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHS
Subjt:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHS

Query:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPG
        PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPG
Subjt:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPG

Query:  TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA
        TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA
Subjt:  TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA

Query:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG
        DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG
Subjt:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG

XP_022928488.1 signal recognition particle 43 kDa protein, chloroplastic-like [Cucurbita moschata]7.1e-18998.54Show/hide
Query:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHS
        MDAVFVNQSLSRLKLPPKP     PLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHS
Subjt:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHS

Query:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPG
        PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPG
Subjt:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPG

Query:  TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA
        TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA
Subjt:  TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA

Query:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG
        DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG
Subjt:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG

XP_022989400.1 signal recognition particle 43 kDa protein, chloroplastic [Cucurbita maxima]2.3e-18797.38Show/hide
Query:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHS
        MDAVFVNQSLS LKLPPKP     PLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSR+LADATGMEYLIKWKDGHS
Subjt:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHS

Query:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPG
        PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPC+RILAEAGADLDHRDKSGGFTALHMAAGYVKPG
Subjt:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPG

Query:  TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA
        TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA
Subjt:  TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA

Query:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG
        DFEAGLEYAVAEAVVGKR+GDDGKMEYLVKWTDIEDATWEPEG
Subjt:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG

XP_023529738.1 signal recognition particle 43 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo]1.3e-18597.08Show/hide
Query:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHS
        MDAVFVNQSLSRLKLPPKPPLPKLP P L    LHLHLRRTFKSFTAYAVNEPLTQQTQQPD+FPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHS
Subjt:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHS

Query:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPG
        PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDED RTALLFVAGLGSEPC+RILAEAGA+LDHRDKSGGFTALHMAAGYVKPG
Subjt:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPG

Query:  TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA
        TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA
Subjt:  TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA

Query:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG
        DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG
Subjt:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG

TrEMBL top hitse value%identityAlignment
A0A0A0K634 Uncharacterized protein1.3e-15682.51Show/hide
Query:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAV--NEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDG
        M+AVF+NQSLSRLKLPPK PLP       PSPI HL+LRR F  FTAYAV  ++P+TQQTQ+    PEDDESYGEVDGIIGSRAL DATGMEYLIKWKDG
Subjt:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAV--NEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDG

Query:  HSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVK
        HSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLID+ D RDF+AVDEDGRTALLFV+GLGS  C+RILA+AG +L+HRD SGGFTALHMAAGYVK
Subjt:  HSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVK

Query:  PGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDL
        P TVELL+ELGADPE+ D+KGRT L LA+EI+KATPRVQF RRLGLE+VI A+E+VV+E+AEVEELLEKRGKGENLEYLVKWKDGEDNEWVK  LIAEDL
Subjt:  PGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDL

Query:  VADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEP
        V D+EAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDI+DATWEP
Subjt:  VADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEP

A0A1S3BHX6 signal recognition particle 43 kDa protein, chloroplastic1.2e-15783.09Show/hide
Query:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAV--NEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDG
        M+AVF+NQSLSRLKLPPKPPLP LP+P  PS I HL+LRR F  FTAYAV  ++P+TQQT +    PEDDESYGEVDGIIGSRAL DATGMEYLIKWKDG
Subjt:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAV--NEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDG

Query:  HSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVK
        HSPSWVPSDFIAKDVVAEYETPWWTAAKKAD+SAL+SLID+ D RDF+AVDEDGRTALLFV+GLGS  C+RILAEAG +L+HRD SGGFTALHMAAGYVK
Subjt:  HSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVK

Query:  PGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDL
        P TVELL+ELGADPE++D+KGRT L LA+EI+KATPRVQF RRLGLE+VIGA+E+VV+E+AEVEELLEKRGKGENLEYLVKWKDGEDNEWVK  LIAEDL
Subjt:  PGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDL

Query:  VADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEP
        VAD+EAGLEYAVAEAVVGKRVGD+GKMEYLVKWTDI+DATWEP
Subjt:  VADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEP

A0A6J1C248 signal recognition particle 43 kDa protein, chloroplastic7.8e-14176.3Show/hide
Query:  MDAVFVNQSLSRLKLPPK-PPLPKLPLPKLPSPILHLHLRRTFKSFTAYAV--NEPLTQQTQQPDNFPE--DDESYGEVDGIIGSRALADATGMEYLIKW
        MDA+F+NQS+SRLK+ PK  PLP    P  PS I + +L+     F+A AV  ++ L QQ+    +  +  +DE+YGEVDGIIGSRAL D +GMEYLI W
Subjt:  MDAVFVNQSLSRLKLPPK-PPLPKLPLPKLPSPILHLHLRRTFKSFTAYAV--NEPLTQQTQQPDNFPE--DDESYGEVDGIIGSRALADATGMEYLIKW

Query:  KDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAG
        KDGH+PSWVPSDFIA+DVVAEYETPWWTAAKKADESALKSLIDAAD RD +AVDEDGRTALLFVAGLGSE C+R+LAE GA++DHRD SGGFTALHMAAG
Subjt:  KDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAG

Query:  YVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIA
        YVKPG VE LL+LGA PEV+D+KGRT L LAREI+KATPR+QF RR+GLERV+GALE+ VFE+AEVE LLEKRGKGENLEYLVKWKDGEDNEWVKA LIA
Subjt:  YVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIA

Query:  EDLVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEP
         DLVADFEAGLEYAVAEAV GKR+GDDGKMEYLVKWTDIEDATWEP
Subjt:  EDLVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEP

A0A6J1EP65 signal recognition particle 43 kDa protein, chloroplastic-like3.4e-18998.54Show/hide
Query:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHS
        MDAVFVNQSLSRLKLPPKP     PLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHS
Subjt:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHS

Query:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPG
        PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPG
Subjt:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPG

Query:  TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA
        TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA
Subjt:  TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA

Query:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG
        DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG
Subjt:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG

A0A6J1JM92 signal recognition particle 43 kDa protein, chloroplastic1.1e-18797.38Show/hide
Query:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHS
        MDAVFVNQSLS LKLPPKP     PLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSR+LADATGMEYLIKWKDGHS
Subjt:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHS

Query:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPG
        PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPC+RILAEAGADLDHRDKSGGFTALHMAAGYVKPG
Subjt:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPG

Query:  TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA
        TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA
Subjt:  TVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA

Query:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG
        DFEAGLEYAVAEAVVGKR+GDDGKMEYLVKWTDIEDATWEPEG
Subjt:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG

SwissProt top hitse value%identityAlignment
O22265 Signal recognition particle 43 kDa protein, chloroplastic1.4e-11060.23Show/hide
Query:  AVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDE---SYGEVDGIIGSRALADATGMEYLIKWKDGH
        A+ ++QSLSR+KL P            P  +    +   F+     AV     + T   +   EDDE   SYGEV+ IIGSR   +   MEYLI+WKDGH
Subjt:  AVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDE---SYGEVDGIIGSRALADATGMEYLIKWKDGH

Query:  SPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKP
        SPSWVPS +IA DVV+EYETPWWTAA+KADE AL  L+   + RD +AVDE+GRTALLFVAGLGS+ C+R+LAEAGADLDHRD  GG TALHMAAGYV+P
Subjt:  SPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKP

Query:  GTVELLLELGADPEVQDDKGRTPLVLAREIVKATPR---VQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAE
          VE L+ELGAD EV+D++G T L LAREI+K TP+   +QF RR+GLE+VI  LE  VFE+AEV+E++EKRGKG+++EYLV+WKDG D EWVK   +AE
Subjt:  GTVELLLELGADPEVQDDKGRTPLVLAREIVKATPR---VQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAE

Query:  DLVADFEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIEDATWEPE
        D+  D+E GLEYAVAE+V+GKRVGDDGK +EYLVKWTD+ DATWEP+
Subjt:  DLVADFEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIEDATWEPE

Q06527 Ankyrin homolog2.3e-0941.44Show/hide
Query:  EYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQ
        E  T    AA K +   L  LI+     D  A D+ G TALL  A  G    +  LA  GA LD  D  G  TAL +A G+     VE LL +GADP  Q
Subjt:  EYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQ

Query:  DDKGRTPLVLA
        D KG T L+ A
Subjt:  DDKGRTPLVLA

Q69ZR2 E3 ubiquitin-protein ligase HECTD16.1e-1033.98Show/hide
Query:  KKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVL
        +  D  AL   ID   + + N +D+ G+T L + +  G++  +  L E GAD++   +S   ++LH AA + +P   + LL  GA+P+++D+ G+TPL  
Subjt:  KKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVL

Query:  ARE
        ARE
Subjt:  ARE

Q8LSQ2 Probable signal recognition particle 43 kDa protein, chloroplastic9.3e-9151.25Show/hide
Query:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALAD-----------ATGM
        M+AV  + SLSRLK PP P   + P   +  P     LR   +  TA AV +  T          +DDE+YGEVD I+ SR + +            T  
Subjt:  MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALAD-----------ATGM

Query:  EYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLI-DAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKS-GGF
        EYL++WKDGH PSW+P++ IA DVVAEYETPWWTAAKKAD + + +L+ D    RD +A D  GRTA+ F AGLGSE C+R LAEAGAD+   +++ GG 
Subjt:  EYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLI-DAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKS-GGF

Query:  TALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPR---VQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGE
        T LH+A GY +P  V  LLELGA+PE  D +GRTPL L ++++  TP+     F RRL LE     LE+ V+E+ EVE++++ RG+G+  EYLV+W+DG 
Subjt:  TALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPR---VQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGE

Query:  DNEWVKAALIAEDLVADFEAGLEYAVAEAVVGKR--VGDDGKMEYLVKWTDIEDATWEP
        D EWV+AA +AEDLV DF+AGLEYAVAEAVV KR     +GK EYLVKW DIE+ATWEP
Subjt:  DNEWVKAALIAEDLVADFEAGLEYAVAEAVVGKR--VGDDGKMEYLVKWTDIEDATWEP

Q9ULT8 E3 ubiquitin-protein ligase HECTD11.0e-0937.5Show/hide
Query:  SLIDAADSRDF--NAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLARE
        +LIDA D+  F  N +D+ G+T L + +  G++  +  L E GAD++   +S   ++LH AA + +P   + LL  GA+P+++D+ G+TPL  ARE
Subjt:  SLIDAADSRDF--NAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLARE

Arabidopsis top hitse value%identityAlignment
AT2G47450.1 chloroplast signal recognition particle component (CAO)9.8e-11260.23Show/hide
Query:  AVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDE---SYGEVDGIIGSRALADATGMEYLIKWKDGH
        A+ ++QSLSR+KL P            P  +    +   F+     AV     + T   +   EDDE   SYGEV+ IIGSR   +   MEYLI+WKDGH
Subjt:  AVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDE---SYGEVDGIIGSRALADATGMEYLIKWKDGH

Query:  SPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKP
        SPSWVPS +IA DVV+EYETPWWTAA+KADE AL  L+   + RD +AVDE+GRTALLFVAGLGS+ C+R+LAEAGADLDHRD  GG TALHMAAGYV+P
Subjt:  SPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKP

Query:  GTVELLLELGADPEVQDDKGRTPLVLAREIVKATPR---VQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAE
          VE L+ELGAD EV+D++G T L LAREI+K TP+   +QF RR+GLE+VI  LE  VFE+AEV+E++EKRGKG+++EYLV+WKDG D EWVK   +AE
Subjt:  GTVELLLELGADPEVQDDKGRTPLVLAREIVKATPR---VQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAE

Query:  DLVADFEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIEDATWEPE
        D+  D+E GLEYAVAE+V+GKRVGDDGK +EYLVKWTD+ DATWEP+
Subjt:  DLVADFEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIEDATWEPE

AT4G35450.1 ankyrin repeat-containing protein 23.7e-1036.13Show/hide
Query:  AKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLV
        A   D   LK+ + +  ++D    D +GRTAL F  G G   C ++L +AGA ++  DK+   T LH AAGY +   V LLLE GA   +Q+   +TP+ 
Subjt:  AKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLV

Query:  LAR-----EIVKATPRVQF
        +A+     E+VK   +  F
Subjt:  LAR-----EIVKATPRVQF

AT4G35450.2 ankyrin repeat-containing protein 23.7e-1036.13Show/hide
Query:  AKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLV
        A   D   LK+ + +  ++D    D +GRTAL F  G G   C ++L +AGA ++  DK+   T LH AAGY +   V LLLE GA   +Q+   +TP+ 
Subjt:  AKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLV

Query:  LAR-----EIVKATPRVQF
        +A+     E+VK   +  F
Subjt:  LAR-----EIVKATPRVQF

AT4G35450.3 ankyrin repeat-containing protein 23.7e-1036.13Show/hide
Query:  AKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLV
        A   D   LK+ + +  ++D    D +GRTAL F  G G   C ++L +AGA ++  DK+   T LH AAGY +   V LLLE GA   +Q+   +TP+ 
Subjt:  AKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLV

Query:  LAR-----EIVKATPRVQF
        +A+     E+VK   +  F
Subjt:  LAR-----EIVKATPRVQF

AT4G35450.4 ankyrin repeat-containing protein 23.7e-1036.13Show/hide
Query:  AKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLV
        A   D   LK+ + +  ++D    D +GRTAL F  G G   C ++L +AGA ++  DK+   T LH AAGY +   V LLLE GA   +Q+   +TP+ 
Subjt:  AKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLV

Query:  LAR-----EIVKATPRVQF
        +A+     E+VK   +  F
Subjt:  LAR-----EIVKATPRVQF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCGTCTTCGTCAACCAGTCACTCTCCCGCCTCAAACTTCCCCCTAAACCCCCTCTCCCTAAACTCCCTCTCCCTAAACTCCCCTCTCCAATTCTCCATCTCCA
TCTCCGCCGCACCTTCAAATCTTTCACCGCCTACGCTGTCAACGAGCCCCTCACTCAACAAACCCAGCAACCAGATAACTTCCCGGAAGACGACGAATCCTACGGCGAGG
TCGACGGAATCATCGGCAGCCGCGCCCTGGCCGACGCTACCGGAATGGAGTATCTAATTAAATGGAAAGACGGGCATTCTCCGTCGTGGGTCCCTTCCGATTTCATTGCT
AAAGACGTCGTCGCTGAGTACGAAACCCCCTGGTGGACCGCCGCCAAGAAAGCCGATGAATCCGCCCTCAAGTCACTTATCGACGCCGCTGACAGCCGCGATTTCAACGC
TGTGGACGAAGACGGCAGAACCGCACTCCTCTTCGTCGCTGGACTCGGGTCGGAGCCTTGCATTAGAATTTTAGCTGAGGCCGGCGCGGATCTCGACCACCGCGACAAGA
GCGGCGGGTTCACTGCTCTGCATATGGCCGCCGGCTACGTAAAACCCGGCACGGTGGAGCTATTACTGGAATTGGGAGCAGATCCGGAGGTGCAAGACGACAAGGGTCGG
ACGCCATTAGTCCTGGCAAGGGAGATTGTGAAAGCGACGCCGAGGGTTCAATTTGCAAGGAGGTTGGGGCTGGAGAGAGTGATCGGAGCGCTGGAGAGAGTGGTTTTCGA
GTTCGCGGAGGTGGAGGAGCTGCTGGAGAAGAGGGGGAAGGGGGAGAATTTGGAGTATCTGGTGAAGTGGAAGGACGGAGAAGATAATGAATGGGTGAAAGCGGCGCTGA
TTGCGGAGGATTTGGTGGCGGATTTCGAAGCCGGATTGGAATACGCGGTGGCGGAAGCGGTGGTCGGAAAGAGAGTTGGGGACGACGGGAAGATGGAGTATCTTGTGAAA
TGGACGGATATTGAGGATGCCACGTGGGAGCCTGAGGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGCCGTCTTCGTCAACCAGTCACTCTCCCGCCTCAAACTTCCCCCTAAACCCCCTCTCCCTAAACTCCCTCTCCCTAAACTCCCCTCTCCAATTCTCCATCTCCA
TCTCCGCCGCACCTTCAAATCTTTCACCGCCTACGCTGTCAACGAGCCCCTCACTCAACAAACCCAGCAACCAGATAACTTCCCGGAAGACGACGAATCCTACGGCGAGG
TCGACGGAATCATCGGCAGCCGCGCCCTGGCCGACGCTACCGGAATGGAGTATCTAATTAAATGGAAAGACGGGCATTCTCCGTCGTGGGTCCCTTCCGATTTCATTGCT
AAAGACGTCGTCGCTGAGTACGAAACCCCCTGGTGGACCGCCGCCAAGAAAGCCGATGAATCCGCCCTCAAGTCACTTATCGACGCCGCTGACAGCCGCGATTTCAACGC
TGTGGACGAAGACGGCAGAACCGCACTCCTCTTCGTCGCTGGACTCGGGTCGGAGCCTTGCATTAGAATTTTAGCTGAGGCCGGCGCGGATCTCGACCACCGCGACAAGA
GCGGCGGGTTCACTGCTCTGCATATGGCCGCCGGCTACGTAAAACCCGGCACGGTGGAGCTATTACTGGAATTGGGAGCAGATCCGGAGGTGCAAGACGACAAGGGTCGG
ACGCCATTAGTCCTGGCAAGGGAGATTGTGAAAGCGACGCCGAGGGTTCAATTTGCAAGGAGGTTGGGGCTGGAGAGAGTGATCGGAGCGCTGGAGAGAGTGGTTTTCGA
GTTCGCGGAGGTGGAGGAGCTGCTGGAGAAGAGGGGGAAGGGGGAGAATTTGGAGTATCTGGTGAAGTGGAAGGACGGAGAAGATAATGAATGGGTGAAAGCGGCGCTGA
TTGCGGAGGATTTGGTGGCGGATTTCGAAGCCGGATTGGAATACGCGGTGGCGGAAGCGGTGGTCGGAAAGAGAGTTGGGGACGACGGGAAGATGGAGTATCTTGTGAAA
TGGACGGATATTGAGGATGCCACGTGGGAGCCTGAGGGTTAA
Protein sequenceShow/hide protein sequence
MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHSPSWVPSDFIA
KDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGR
TPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVK
WTDIEDATWEPEG