CuGenDBv2

Gene ID	Carg26376
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DNL-type domain-containing protein
Genome location	Carg_Chr11:11331783..11332968
RNA-Seq Expression	Carg26376
Synteny	Carg26376
Gene Ontology terms	GO:0006457 - protein folding (biological process) GO:0030150 - protein import into mitochondrial matrix (biological process) GO:0050821 - protein stabilization (biological process) GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0008270 - zinc ion binding (molecular function) GO:0051087 - chaperone binding (molecular function)
InterPro domains	IPR007853 - Zinc finger, DNL-type IPR024158 - Mitochondrial import protein TIM15

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7022738.1 ZIM17, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.0e-48

100

Show/hide

Query:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ
        MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ
Subjt:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ

XP_022928140.1 uncharacterized protein LOC111435053 [Cucurbita moschata]

1.0e-46

97.75

Show/hide

Query:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ
        MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHE+KCYVNPSFNYGSNGWGD NFKYLDMEEDGSNDDIFPTQ
Subjt:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ

XP_022989270.1 uncharacterized protein LOC111486391 isoform X1 [Cucurbita maxima]

8.1e-44

95.51

Show/hide

Query:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ
        MLVAFTC ICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGD NFKYLDMEEDGSN DIFP Q
Subjt:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ

XP_022989271.1 uncharacterized protein LOC111486391 isoform X2 [Cucurbita maxima]

8.1e-44

95.51

Show/hide

Query:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ
        MLVAFTC ICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGD NFKYLDMEEDGSN DIFP Q
Subjt:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ

XP_023529786.1 uncharacterized protein LOC111792506 [Cucurbita pepo subsp. pepo]

1.6e-44

96.63

Show/hide

Query:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ
        MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYG NGWGD NFKYLDMEEDGSN DIFPTQ
Subjt:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BII6 uncharacterized protein LOC103490262

6.7e-44

93.26

Show/hide

Query:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ
        MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGC+AYHKLVDNLNLFHEMKCY+NPSFNYGSNGWGD NFKYLD+EEDG NDDIFP Q
Subjt:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ

A0A5D3D712 Mitochondrial protein import protein ZIM17

6.7e-44

93.26

Show/hide

Query:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ
        MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGC+AYHKLVDNLNLFHEMKCY+NPSFNYGSNGWGD NFKYLD+EEDG NDDIFP Q
Subjt:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ

A0A6J1EQU5 uncharacterized protein LOC111435053

4.9e-47

97.75

Show/hide

Query:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ
        MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHE+KCYVNPSFNYGSNGWGD NFKYLDMEEDGSNDDIFPTQ
Subjt:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ

A0A6J1JJL2 uncharacterized protein LOC111486391 isoform X2

3.9e-44

95.51

Show/hide

Query:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ
        MLVAFTC ICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGD NFKYLDMEEDGSN DIFP Q
Subjt:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ

A0A6J1JLW6 uncharacterized protein LOC111486391 isoform X1

3.9e-44

95.51

Show/hide

Query:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ
        MLVAFTC ICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGD NFKYLDMEEDGSN DIFP Q
Subjt:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ

SwissProt top hits

e value

%identity

Alignment

Q09759 Uncharacterized protein C24H6.02c

2.6e-05

41.67

Show/hide

Query:  VAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHE
        V+FTC +C  R+    +  AY +GTV VQC  C   H + D+L +F E
Subjt:  VAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHE

Q5SXM8 DNL-type zinc finger protein

9.1e-06

38.78

Show/hide

Query:  VAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEM
        + +TC +CG R+++ I+  AY  G V V C GC  +H + DNL  F ++
Subjt:  VAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEM

Q9D113 DNL-type zinc finger protein

1.8e-06

Show/hide

Query:  VAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK
        + +TC +CG R+++ I+  AY  G V V C GC  +H + DNL+ F ++K
Subjt:  VAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK

Arabidopsis top hits

e value

%identity

Alignment

AT1G68730.1 Zim17-type zinc finger protein

3.5e-13

66.67

Show/hide

Query:  VAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHE
        V FTCN CG+RT R IN HAY  G VFVQC GC  +HKLVDNL L  E
Subjt:  VAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHE

AT5G27280.1 Zim17-type zinc finger protein

2.7e-29

64.84

Show/hide

Query:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYV-NPSFNYGSNGWGDFNFKYLDMEED---GSNDDIFP
        M VAFTCN+CGQRTTRAINPHAYTDGTVFVQCCGC+ +HKLVDNLNLFHE+K YV + SF+Y    W        D E+D   G ++D+FP
Subjt:  MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYV-NPSFNYGSNGWGDFNFKYLDMEED---GSNDDIFP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

ATGCTTGTGGCTTTTACTTGTAACATTTGTGGGCAACGTACAACACGGGCTATTAACCCCCATGCTTATACCGATGGCACTGTGTTTGTGCAGTGTTGTGGATGCAGTGC
ATACCACAAGCTTGTGGACAACTTAAACCTGTTTCATGAGATGAAATGCTACGTCAACCCGAGTTTTAACTATGGGAGTAATGGGTGGGGCGATTTCAACTTCAAATATC
TGGACATGGAAGAAGATGGAAGCAACGACGATATATTCCCAACACAATGAGGTAAATGCCCTGTGCTCATGGAGTATGTACATTCTGGACTCATCTGTACAAGAACCATA
GAACCATTATTTGTTAGGCTAAATTATAAAAAATACTCCTTTGTGTGTTTCAAAAGTATCTTCTTTCAAAAATTGCAATTTTACTCTTTGATAAATCGTAACCATT

Protein sequence

Show/hide protein sequence

MLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDFNFKYLDMEEDGSNDDIFPTQ

Carg26376 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome