CuGenDBv2

Gene ID	Carg26393
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	desumoylating isopeptidase 1-like
Genome location	Carg_Chr19:1141825..1143546
RNA-Seq Expression	Carg26393
Synteny	Carg26393
Gene Ontology terms	GO:0008233 - peptidase activity (molecular function)
InterPro domains	IPR008580 - PPPDE peptidase domain IPR042266 - PPPDE peptidase domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6571583.1 Desumoylating isopeptidase 1, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-38

97.65

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Query:  MLFVFATSQCKESHRVVLNLYDLSRGSARQFSTTLLGKPIKGICLLSHDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL
        MLFVFATSQCKESHRVVLNLYDLSRGSARQF TTLLGKPIKGICLL HDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL
Subjt:  MLFVFATSQCKESHRVVLNLYDLSRGSARQFSTTLLGKPIKGICLLSHDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL

KAG7011326.1 Desumoylating isopeptidase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.4e-71

100

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Query:  MLFVFATSQCKESHRVVLNLYDLSRGSARQFSTTLLGKPIKGICLLSHDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRLNLKTMLRSGVVLKVP
        MLFVFATSQCKESHRVVLNLYDLSRGSARQFSTTLLGKPIKGICLLSHDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRLNLKTMLRSGVVLKVP
Subjt:  MLFVFATSQCKESHRVVLNLYDLSRGSARQFSTTLLGKPIKGICLLSHDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRLNLKTMLRSGVVLKVP

Query:  QAVMSDRAVVVVARQLKDSLPGKNNGGLDTSGYRAWDDN
        QAVMSDRAVVVVARQLKDSLPGKNNGGLDTSGYRAWDDN
Subjt:  QAVMSDRAVVVVARQLKDSLPGKNNGGLDTSGYRAWDDN

XP_022156051.1 desumoylating isopeptidase 1 isoform X1 [Momordica charantia]

1.5e-20

43.75

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Query:  KESHRVVLNLYDLSRGSARQFSTTLLGKPIKGI---------------------------------------------------------------CLLS
        +ESHRVVLNLYDLSRG ARQFS TLLGKP++GI                                                                LL 
Subjt:  KESHRVVLNLYDLSRGSARQFSTTLLGKPIKGI---------------------------------------------------------------CLLS

Query:  HDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL------NLKTMLRSGVVLKVPQ
        H+CNNFSNEV Q LVGSTIP+YILQLP+EVS+SP+GRL      NL+T L+SG V K+P+
Subjt:  HDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL------NLKTMLRSGVVLKVPQ

XP_022156073.1 desumoylating isopeptidase 1 isoform X2 [Momordica charantia]

3.5e-17

44.2

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Query:  KESHRVVLNLYDLSRGSARQFSTTLLGKPIKGI---------------------------------------------------------------CLLS
        +ESHRVVLNLYDLSRG ARQFS TLLGKP++GI                                                                LL 
Subjt:  KESHRVVLNLYDLSRGSARQFSTTLLGKPIKGI---------------------------------------------------------------CLLS

Query:  HDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL
        H+CNNFSNEV Q LVGSTIP+YILQLP+EVS+SP+GRL
Subjt:  HDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL

XP_038887396.1 desumoylating isopeptidase 1 [Benincasa hispida]

4.4e-20

41.4

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Query:  KESHRVVLNLYDLSRGSARQFSTTLLGKPIKGI---------------------------------------------------------------CLLS
        +ESHRVVLNLYDLS G ARQFS  LLGKPI+GI                                                                LL 
Subjt:  KESHRVVLNLYDLSRGSARQFSTTLLGKPIKGI---------------------------------------------------------------CLLS

Query:  HDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL------NLKTMLRSGVVLKVPQAVMSDRAVVVVARQLKDSLPGKNNGG
        H+CNNFSNEV Q LVGSTIPEYILQLP+EV SSP+GRL      NL+T L+SG V K PQ   S  A+      + DS   ++ GG
Subjt:  HDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL------NLKTMLRSGVVLKVPQAVMSDRAVVVVARQLKDSLPGKNNGG

TrEMBL top hits

e value

%identity

Alignment

A0A199UAN4 PPPDE domain-containing protein

1.8e-16

40.62

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Query:  KESHRVVLNLYDLSRGSARQFSTTLLGKPIKGI---------------------------------------------------------------CLLS
        +E HRV LN+YDLS+G ARQ STT LGK I+GI                                                                LLS
Subjt:  KESHRVVLNLYDLSRGSARQFSTTLLGKPIKGI---------------------------------------------------------------CLLS

Query:  HDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL------NLKTMLRSGVVLKVPQ
        H+CNNFSNEV Q LVG TIPEYILQLP+EV SSP+G L      NL+T LR+G V + PQ
Subjt:  HDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL------NLKTMLRSGVVLKVPQ

A0A2C9UQ49 PPPDE domain-containing protein

1.4e-16

40.62

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Query:  KESHRVVLNLYDLSRGSARQFSTTLLGKPIKGI---------------------------------------------------------------CLLS
        +E H+VVLN+YDLS+G ARQ STT LGK I+GI                                                                LL+
Subjt:  KESHRVVLNLYDLSRGSARQFSTTLLGKPIKGI---------------------------------------------------------------CLLS

Query:  HDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL------NLKTMLRSGVVLKVPQ
        H+CNNFSNEV Q LVG+TIPEYILQLP+EV SSP+G L      NL+T LR G V +VPQ
Subjt:  HDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL------NLKTMLRSGVVLKVPQ

A0A6A3AUY2 Chitinase family protein

1.8e-16

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Query:  KESHRVVLNLYDLSRGSARQFSTTLLGKPIKGI---------------------------------------------------------------CLLS
        +ESH+V LN+YDLS+G ARQ S TLLGK I+GI                                                                LL+
Subjt:  KESHRVVLNLYDLSRGSARQFSTTLLGKPIKGI---------------------------------------------------------------CLLS

Query:  HDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL------NLKTMLRSGVVLKVPQ
        H+CNNFSNEV Q +VGSTIP+YILQLP+EV SSP+G L      NL+T LR+G V +VPQ
Subjt:  HDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL------NLKTMLRSGVVLKVPQ

A0A6J1DPL4 desumoylating isopeptidase 1 isoform X1

7.2e-21

43.75

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Query:  KESHRVVLNLYDLSRGSARQFSTTLLGKPIKGI---------------------------------------------------------------CLLS
        +ESHRVVLNLYDLSRG ARQFS TLLGKP++GI                                                                LL 
Subjt:  KESHRVVLNLYDLSRGSARQFSTTLLGKPIKGI---------------------------------------------------------------CLLS

Query:  HDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL------NLKTMLRSGVVLKVPQ
        H+CNNFSNEV Q LVGSTIP+YILQLP+EVS+SP+GRL      NL+T L+SG V K+P+
Subjt:  HDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL------NLKTMLRSGVVLKVPQ

A0A6J1DPL9 desumoylating isopeptidase 1 isoform X2

1.7e-17

44.2

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Query:  KESHRVVLNLYDLSRGSARQFSTTLLGKPIKGI---------------------------------------------------------------CLLS
        +ESHRVVLNLYDLSRG ARQFS TLLGKP++GI                                                                LL 
Subjt:  KESHRVVLNLYDLSRGSARQFSTTLLGKPIKGI---------------------------------------------------------------CLLS

Query:  HDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL
        H+CNNFSNEV Q LVGSTIP+YILQLP+EVS+SP+GRL
Subjt:  HDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL

SwissProt top hits

e value

%identity

Alignment

Q4KM30 Desumoylating isopeptidase 1

6.3e-06

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Query:  LLSHDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGR
        L  H+CN FSNEV Q L G  IP YI  LPSEV S+P G+
Subjt:  LLSHDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGR

Q6GLM5 Desumoylating isopeptidase 1

4.4e-07

30.15

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Query:  HRVVLNLYDLSRGSARQFSTTLLGKPIKGI---------------------C--------------------------------------------LLSH
        H V L +YD+SRG AR+ S  +LGK ++GI                     C                                            L  H
Subjt:  HRVVLNLYDLSRGSARQFSTTLLGKPIKGI---------------------C--------------------------------------------LLSH

Query:  DCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGR
        +CN FSNEV Q L G  IP YI +LPSEV S+P+G+
Subjt:  DCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGR

Q6ICB0 Desumoylating isopeptidase 1

6.3e-06

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Query:  LLSHDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGR
        L  H+CN FSNEV Q L G  IP YI  LPSEV S+P G+
Subjt:  LLSHDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGR

Q9CQT7 Desumoylating isopeptidase 1

6.3e-06

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Query:  LLSHDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGR
        L  H+CN FSNEV Q L G  IP YI  LPSEV S+P G+
Subjt:  LLSHDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGR

Arabidopsis top hits

e value

%identity

Alignment

AT3G07090.1 PPPDE putative thiol peptidase family protein

4.1e-16

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Query:  KESHRVVLNLYDLSRGSARQFSTTLLGKPIKGIC---------------------------------------------------------------LLS
        +E+H+V LN+YDLS+G ARQ S +LLGK I+G+                                                                LL+
Subjt:  KESHRVVLNLYDLSRGSARQFSTTLLGKPIKGIC---------------------------------------------------------------LLS

Query:  HDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL------NLKTMLRSGVVLKVPQ
        H+CNNFSNEV Q LVG  IP+YILQLP++V +SP+G L       L+T L++G V +VPQ
Subjt:  HDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRL------NLKTMLRSGVVLKVPQ

Sequences

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CDS sequence

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ATGTTGTTTGTGTTTGCAACCTCACAATGCAAGGAGTCTCACAGAGTTGTATTGAATCTATACGACCTTAGCCGCGGATCGGCTCGACAGTTCTCGACAACATTGTTAGG
GAAACCCATTAAAGGCATATGCTTGTTGAGTCACGATTGCAACAACTTTAGTAATGAGGTTGATCAGCCTTTGGTTGGCTCGACCATCCCTGAGTATATTCTTCAGCTTC
CCAGTGAAGTTAGCAGCAGTCCCGTCGGTAGACTCAATCTCAAAACAATGTTAAGATCGGGGGTAGTCCTGAAAGTTCCACAGGCTGTGATGTCGGACCGCGCTGTCGTG
GTGGTAGCAAGGCAACTAAAGGACAGTCTGCCGGGCAAGAACAATGGAGGACTTGACACATCTGGCTATAGAGCCTGGGATGACAATTGA

mRNA sequence

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Protein sequence

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MLFVFATSQCKESHRVVLNLYDLSRGSARQFSTTLLGKPIKGICLLSHDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRLNLKTMLRSGVVLKVPQAVMSDRAVV
VVARQLKDSLPGKNNGGLDTSGYRAWDDN

Carg26393 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome