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Carg26397 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26397
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein RALF-like 4
Genome locationCarg_Chr11:8696869..8697234
RNA-Seq ExpressionCarg26397
SyntenyCarg26397
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588676.1 Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. sororia]5.8e-61100Show/hide
Query:  MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR
        MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR
Subjt:  MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR

Query:  RRINPYRRGCAAITGCARFTD
        RRINPYRRGCAAITGCARFTD
Subjt:  RRINPYRRGCAAITGCARFTD

KAG6588679.1 Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. sororia]3.5e-5085.59Show/hide
Query:  MKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRI
        MK+C+ LLLVF V  PLSFA HE S++SSL+DDN  YSFFGGDSSEAMTEDS RQLFQYGFVYNKEARKR+LSYYAL +NNIPCGRRGTSYYDCKKRRRI
Subjt:  MKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRI

Query:  NPYRRGCAAITGCARFTD
        NPYRRGCAAITGCARFTD
Subjt:  NPYRRGCAAITGCARFTD

XP_022927737.1 protein RALF-like 19 [Cucurbita moschata]1.3e-5795.87Show/hide
Query:  MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR
        MGTMKL IF+LLVFVVAVPLSFALHETSNASSLV+DN AYSFFGGDSSEAMTEDS RQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR
Subjt:  MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR

Query:  RRINPYRRGCAAITGCARFTD
        RRINPYRRGCAAITGCARFTD
Subjt:  RRINPYRRGCAAITGCARFTD

XP_022989014.1 protein RALF-like 4 [Cucurbita maxima]9.6e-5693.39Show/hide
Query:  MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR
        MGTMKL IFLLLVFVV +PLSFALHETSNASSLVDDN  YSFFGGDSSEAMTEDS RQLFQYGF YNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR
Subjt:  MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR

Query:  RRINPYRRGCAAITGCARFTD
        R INPYRRGCAAITGCARFTD
Subjt:  RRINPYRRGCAAITGCARFTD

XP_023531888.1 protein RALF-like 4 [Cucurbita pepo subsp. pepo]1.9e-5186.78Show/hide
Query:  MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR
        MGTMKLCIFLLLVFVV VP SFA HETS++SSL+DD   YSFFGGDSSEAMTED+ RQLFQYGF YN EARKR LSYYAL +NNIPCGRRGTSYYDCKKR
Subjt:  MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR

Query:  RRINPYRRGCAAITGCARFTD
        RRINPYRRGCAAITGCARFTD
Subjt:  RRINPYRRGCAAITGCARFTD

TrEMBL top hitse value%identityAlignment
A0A6J1EI16 protein RALF-like 196.5e-5895.87Show/hide
Query:  MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR
        MGTMKL IF+LLVFVVAVPLSFALHETSNASSLV+DN AYSFFGGDSSEAMTEDS RQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR
Subjt:  MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR

Query:  RRINPYRRGCAAITGCARFTD
        RRINPYRRGCAAITGCARFTD
Subjt:  RRINPYRRGCAAITGCARFTD

A0A6J1EIG3 rapid alkalinization factor 23-like8.5e-5083.47Show/hide
Query:  MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR
        M TMK+ + LLLVF    PLSFA HE S++SSL+DDN  YSFFGGDSSEAMTEDS RQLFQYGFVYNKEARKR+LSYYAL +NNIPCGRRGTSYYDCKKR
Subjt:  MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR

Query:  RRINPYRRGCAAITGCARFTD
        RRINPYRRGCAAITGCARFTD
Subjt:  RRINPYRRGCAAITGCARFTD

A0A6J1JIT9 protein RALF-like 43.6e-4880.49Show/hide
Query:  MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSS--EAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCK
        M TMK+C+FLLLVF +  PLSFA HETS+ SSLVDDN  YSFFGG SS  EAMTEDS RQLF+YGF YN+EARKR+L+YYAL +NNIPCGRRG SYYDCK
Subjt:  MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSS--EAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCK

Query:  KRRRINPYRRGCAAITGCARFTD
        KRRRINPYRRGCAAITGCARFTD
Subjt:  KRRRINPYRRGCAAITGCARFTD

A0A6J1JL71 protein RALF-like 45.5e-4981.82Show/hide
Query:  MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR
        M TMK+C+FLLLVF V  P S A HETS  SSLVDDN  YSFFGGDSSE+MTEDS RQLFQYGF YN EARKR+L+YYAL +NNIPCGRRG+SYYDCKKR
Subjt:  MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR

Query:  RRINPYRRGCAAITGCARFTD
        RRINPYRRGCAAITGCARFTD
Subjt:  RRINPYRRGCAAITGCARFTD

A0A6J1JN66 protein RALF-like 44.6e-5693.39Show/hide
Query:  MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR
        MGTMKL IFLLLVFVV +PLSFALHETSNASSLVDDN  YSFFGGDSSEAMTEDS RQLFQYGF YNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR
Subjt:  MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKR

Query:  RRINPYRRGCAAITGCARFTD
        R INPYRRGCAAITGCARFTD
Subjt:  RRINPYRRGCAAITGCARFTD

SwissProt top hitse value%identityAlignment
Q6NME6 Protein RALF-like 192.2e-1570.59Show/hide
Query:  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT
        AR+ Y+SY ALR+NN+PC RRG SYYDCKKR+R NPYRRGC+ IT C R T
Subjt:  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT

Q8L9P8 Protein RALF-like 339.7e-1157.14Show/hide
Query:  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR
        A  +Y+SY ALR+N +PC RRG SYY+C++  + NPY RGC+AIT C R
Subjt:  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR

Q945T0 Rapid alkalinization factor9.7e-1159.57Show/hide
Query:  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGC
        A K+Y+SY AL++N++PC RRG SYY+CK   + NPY RGC+AIT C
Subjt:  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGC

Q9FZA0 Protein RALF-like 48.5e-1570.83Show/hide
Query:  KRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF
        +RY+ Y AL++NN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R+
Subjt:  KRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF

Q9LUS7 Rapid alkalinization factor 232.6e-1141.3Show/hide
Query:  NASSLVDDNVAYSFFGGDSSEAMTEDS--HRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR
        + S+ + D     + GG+  E    DS  +R++          A +RY+SY ALR+N IPC RRG SYY+C++  + NPY RGC+AIT C R
Subjt:  NASSLVDDNVAYSFFGGDSSEAMTEDS--HRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR

Arabidopsis top hitse value%identityAlignment
AT1G28270.1 ralf-like 46.0e-1670.83Show/hide
Query:  KRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF
        +RY+ Y AL++NN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R+
Subjt:  KRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF

AT2G33775.1 ralf-like 191.6e-1670.59Show/hide
Query:  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT
        AR+ Y+SY ALR+NN+PC RRG SYYDCKKR+R NPYRRGC+ IT C R T
Subjt:  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT

AT3G05490.1 ralf-like 225.9e-1133.04Show/hide
Query:  LVFVVAVPLSFALHETSNASSLVD-----DNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPY
        ++ ++A+ +S A+  T +    +D      +  +S   G  +E + E+   + F         A+K+Y+SY A+R+N++PC RRG SYY+C++  + NPY
Subjt:  LVFVVAVPLSFALHETSNASSLVD-----DNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPY

Query:  RRGCAAITGCAR
         RGC+ IT C R
Subjt:  RRGCAAITGCAR

AT3G16570.1 rapid alkalinization factor 231.8e-1241.3Show/hide
Query:  NASSLVDDNVAYSFFGGDSSEAMTEDS--HRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR
        + S+ + D     + GG+  E    DS  +R++          A +RY+SY ALR+N IPC RRG SYY+C++  + NPY RGC+AIT C R
Subjt:  NASSLVDDNVAYSFFGGDSSEAMTEDS--HRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR

AT4G15800.1 ralf-like 336.9e-1257.14Show/hide
Query:  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR
        A  +Y+SY ALR+N +PC RRG SYY+C++  + NPY RGC+AIT C R
Subjt:  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACAATGAAGCTCTGCATCTTTCTCCTCCTCGTCTTTGTTGTTGCTGTTCCGCTCTCCTTTGCCTTACATGAAACCTCCAACGCTTCATCCCTCGTTGACGATAA
TGTTGCATATAGCTTCTTTGGCGGAGACTCCTCTGAAGCCATGACTGAAGATAGTCATCGACAACTTTTCCAATATGGATTCGTTTATAATAAGGAAGCTCGCAAGAGGT
ATTTGAGCTACTATGCACTTAGGCAGAATAATATCCCTTGTGGCCGTCGTGGTACCTCTTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGCGGTTGC
GCCGCTATCACTGGATGTGCTCGATTCACTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAACAATGAAGCTCTGCATCTTTCTCCTCCTCGTCTTTGTTGTTGCTGTTCCGCTCTCCTTTGCCTTACATGAAACCTCCAACGCTTCATCCCTCGTTGACGATAA
TGTTGCATATAGCTTCTTTGGCGGAGACTCCTCTGAAGCCATGACTGAAGATAGTCATCGACAACTTTTCCAATATGGATTCGTTTATAATAAGGAAGCTCGCAAGAGGT
ATTTGAGCTACTATGCACTTAGGCAGAATAATATCCCTTGTGGCCGTCGTGGTACCTCTTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGCGGTTGC
GCCGCTATCACTGGATGTGCTCGATTCACTGATTAA
Protein sequenceShow/hide protein sequence
MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGC
AAITGCARFTD