CuGenDBv2

Gene ID	Carg26430
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Patatin
Genome location	Carg_Chr04:2755094..2756217
RNA-Seq Expression	Carg26430
Synteny	Carg26430
Gene Ontology terms	GO:0019433 - triglyceride catabolic process (biological process) GO:0055088 - lipid homeostasis (biological process) GO:0005773 - vacuole (cellular component) GO:0005811 - lipid droplet (cellular component) GO:0016020 - membrane (cellular component) GO:0004806 - triglyceride lipase activity (molecular function) GO:0016740 - transferase activity (molecular function) GO:0045735 - nutrient reservoir activity (molecular function)
InterPro domains	IPR033562 - Patatin-like phospholipase domain-containing protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600351.1 Patatin-like phospholipase domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-58

98.21

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Query:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN
        F  GYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN
Subjt:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN

Query:  PVEKLVEDERLG
        PVEKLVEDERLG
Subjt:  PVEKLVEDERLG

KAG7031008.1 hypothetical protein SDJN02_05047, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.3e-82

100

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Query:  MSQLLLLKFFGGPEACWWISLIQKMISSMQFSLLPLFQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRA
        MSQLLLLKFFGGPEACWWISLIQKMISSMQFSLLPLFQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRA
Subjt:  MSQLLLLKFFGGPEACWWISLIQKMISSMQFSLLPLFQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRA

Query:  GPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDNPVEKLVEDERLG
        GPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDNPVEKLVEDERLG
Subjt:  GPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDNPVEKLVEDERLG

XP_022943045.1 patatin-like phospholipase domain-containing protein 2 [Cucurbita moschata]

1.1e-58

98.21

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Query:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN
        F  GYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN
Subjt:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN

Query:  PVEKLVEDERLG
        PVEKLVEDERLG
Subjt:  PVEKLVEDERLG

XP_022981351.1 patatin-like phospholipase domain-containing protein 4 [Cucurbita maxima]

2.8e-57

96.43

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Query:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN
        F  GYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTV VCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDA VWAKDN
Subjt:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN

Query:  PVEKLVEDERLG
        PVEKLVEDERLG
Subjt:  PVEKLVEDERLG

XP_023513040.1 patatin-like phospholipase domain-containing protein 2 [Cucurbita pepo subsp. pepo]

4.3e-58

97.32

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Query:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN
        F  GYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILD LFDLGYQDAAVWAKDN
Subjt:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN

Query:  PVEKLVEDERLG
        PVEKLVEDERLG
Subjt:  PVEKLVEDERLG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L746 Patatin

3.1e-54

92.73

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Query:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN
        F  GYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPA+RLGFEGIGISPDCNPENRAGPRELFNWALEPAED ILD+LF+LGYQDAAVW +DN
Subjt:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN

Query:  PVEKLVEDER
        PVEKLVEDER
Subjt:  PVEKLVEDER

A0A5A7T6F4 Patatin

1.2e-53

90.91

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Query:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN
        F  GYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPA+RLGFEGIGISPDCNPENRAGPRELFNWALEPAED ILD+LF+LGY+DAAVW +DN
Subjt:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN

Query:  PVEKLVEDER
        PVEKLVEDE+
Subjt:  PVEKLVEDER

A0A6J1D7Z8 Patatin

1.8e-54

92.66

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Query:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN
        F  GYLAPRP T+FRNRLCIDGGLTLFMPPTSAS TVRVCAFPA+RLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDA VWA+DN
Subjt:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN

Query:  PVEKLVEDE
        PVEKLVEDE
Subjt:  PVEKLVEDE

A0A6J1FXB2 Patatin

5.5e-59

98.21

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Query:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN
        F  GYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN
Subjt:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN

Query:  PVEKLVEDERLG
        PVEKLVEDERLG
Subjt:  PVEKLVEDERLG

A0A6J1IWB3 Patatin

1.3e-57

96.43

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Query:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN
        F  GYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTV VCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDA VWAKDN
Subjt:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN

Query:  PVEKLVEDERLG
        PVEKLVEDERLG
Subjt:  PVEKLVEDERLG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G33270.1 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein

4.6e-42

69.72

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Query:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN
        F  GYLAPRP T+FRNRLC+DGGLTLFMPPT+A++TVRVCAF A+    +GI I PDCNP NRA  R+L NWALEPAED +L+RLF+LGY DAA WA+ N
Subjt:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDN

Query:  PVEKLVEDE
        PVE LV D+
Subjt:  PVEKLVEDE

AT1G33270.2 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein

5.0e-12

78.38

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Query:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTV
        F  GYLAPRP T+FRNRLC+DGGLTLFMPPT+A++TV
Subjt:  FQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTV

Sequences

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CDS sequence

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mRNA sequence

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ATGTCCCAGTTGCTGTTACTCAAGTTTTTTGGAGGCCCAGAGGCTTGTTGGTGGATCAGTTTGATTCAAAAGATGATCTCATCAATGCAGTTTTCACTTCTTCCTTTATT
CCAGGGTGGATACCTAGCGCCAAGACCCGTCACCGTCTTTCGGAATAGACTATGCATTGATGGTGGTCTAACATTGTTCATGCCACCTACTTCTGCCTCTCAAACGGTGC
GTGTATGTGCTTTCCCCGCTACCCGATTGGGCTTTGAAGGGATTGGGATCAGTCCAGACTGCAACCCTGAAAACAGAGCTGGGCCAAGAGAGCTTTTCAACTGGGCTCTT
GAACCAGCAGAAGATTACATTCTAGACCGTCTCTTTGACCTCGGATATCAAGATGCAGCTGTTTGGGCCAAGGATAATCCTGTTGAAAAGCTGGTGGAAGACGAAAGGCT
CGGTTGAGGACGCGGTTGTAACTAGCTGAAGCATAAAATTATGATGGCGAATCAATCTAAATGGAAGATGTTGCAGGCTTGGTGGTAAGTGCATGCCTTAAACCCAAAAC
TTTTTGGATTGCTGCTGATACTTACTGCCTCAAAATGGTTAGATACACATATATGAATCCCTTTAACAGAATAGAACAAAAGCCTTCATTCATGAATGTGAAGATAAAAA
TAATTATACAGGTAGATATCAAAAGTCCTGAGTTTATGATGGCCAAGTACAACATTCTCAGGATTTACATGTGCATTTTGCTGCTATTTTACTACATTCTCAGTACAAGA
ACAACATTCTTGTATTTTGTTTTCTTCATACAGTACATATATACATACATATATATATATATATATATCATTTCTTTTTCTTTGAACATCTTTCCA

Protein sequence

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MSQLLLLKFFGGPEACWWISLIQKMISSMQFSLLPLFQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWAL
EPAEDYILDRLFDLGYQDAAVWAKDNPVEKLVEDERLG

Carg26430 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome