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Carg26447 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26447
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Genome locationCarg_Chr05:8046939..8047479
RNA-Seq ExpressionCarg26447
SyntenyCarg26447
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
GO:0051287 - NAD binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AWI70649.1 NADH dehydrogenase 49 kDa subunit [Pachypodium baronii]1.2e-1269.81Show/hide
Query:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ
        G  K+ + Q I QYLPY+TPWDYLAT+FTEAITVNG E LGNIQVPKR+ Y++
Subjt:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ

KAG7029997.1 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-41100Show/hide
Query:  MIGSVYKDFGFSHNDQIISGLVSTFPGCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQRKRISI
        MIGSVYKDFGFSHNDQIISGLVSTFPGCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQRKRISI
Subjt:  MIGSVYKDFGFSHNDQIISGLVSTFPGCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQRKRISI

XP_037492015.1 LOW QUALITY PROTEIN: NAD(P)H-quinone oxidoreductase subunit H, chloroplastic-like [Jatropha curcas]1.2e-1257.75Show/hide
Query:  FGFSHNDQIISGLVSTFPGCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ
        F +  N + I G +    G  K+ K   I QYLPY+T WDYLAT+FTEAITVNG ELLGNIQVPKR++Y++
Subjt:  FGFSHNDQIISGLVSTFPGCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ

YP_009476525.1 NADH-plastoquinone oxidoreductase subunit 7 [Xanthoceras sorbifolium]4.6e-1267.92Show/hide
Query:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ
        G  K+ + + I QYLPY+T WDYLAT+FTEAITVNG ELLGNIQVPKR+ Y++
Subjt:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ

YP_010048131.1 NADH-plastoquinone oxidoreductase subunit 7 [Pilea microphylla]5.9e-1267.92Show/hide
Query:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ
        G  K+ + + I QYLPY+T WDYLAT+FTEAITVNG ELLGNIQVPKR+ Y++
Subjt:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ

TrEMBL top hitse value%identityAlignment
A0A2P1FUF7 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic2.2e-1267.92Show/hide
Query:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ
        G  K+ + + I QYLPY+T WDYLAT+FTEAITVNG ELLGNIQVPKR+ Y++
Subjt:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ

A0A2S1U6P2 NADH dehydrogenase 49 kDa subunit5.8e-1369.81Show/hide
Query:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ
        G  K+ + Q I QYLPY+TPWDYLAT+FTEAITVNG E LGNIQVPKR+ Y++
Subjt:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ

A0A7T0IIK6 NADH-plastoquinone oxidoreductase subunit 72.9e-1267.92Show/hide
Query:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ
        G  K+ + + I QYLPY+T WDYLAT+FTEAITVNG ELLGNIQVPKR+ Y++
Subjt:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ

A0A7T0IJA3 NADH-plastoquinone oxidoreductase subunit 72.9e-1267.92Show/hide
Query:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ
        G  K+ + + I QYLPY+T WDYLAT+FTEAITVNG ELLGNIQVPKR+ Y++
Subjt:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ

F5C031 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic3.8e-1267.92Show/hide
Query:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ
        G  K+ + + I QYLPY+T WDYLAT+FTEAITVNG ELLGNIQVPKR+ Y++
Subjt:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ

SwissProt top hitse value%identityAlignment
A4QJH2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic5.1e-1466.04Show/hide
Query:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ
        G  K+ + + I QYLPY+T WDYLAT+FTEAITVNG E LGNIQVPKR+ Y++
Subjt:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ

A4QJQ6 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic5.1e-1466.04Show/hide
Query:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ
        G  K+ + + I QYLPY+T WDYLAT+FTEAITVNG E LGNIQVPKR+ Y++
Subjt:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ

A4QK76 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic5.1e-1466.04Show/hide
Query:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ
        G  K+ + + I QYLPY+T WDYLAT+FTEAITVNG E LGNIQVPKR+ Y++
Subjt:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ

B1NWK5 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic1.7e-1467.92Show/hide
Query:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ
        G  K+ + + I QYLPY+T WDYLAT+FTEAITVNG ELLGNIQVPKR+ Y++
Subjt:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ

Q09WW2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic1.3e-1466.04Show/hide
Query:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ
        G  K+ + + I QYLPY+T WDYLAT+FTEAIT+NG ELLGNIQVPKR+ Y++
Subjt:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ

Arabidopsis top hitse value%identityAlignment
ATCG00530.1 CemA-like proton extrusion protein-related4.0e-0676.92Show/hide
Query:  MIGSVYKDFGFSHNDQIISGLVSTFP
        MIG +YKDFGF+H +QI+SGLVSTFP
Subjt:  MIGSVYKDFGFSHNDQIISGLVSTFP

ATCG01110.1 NAD(P)H dehydrogenase subunit H3.6e-1566.04Show/hide
Query:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ
        G  K+ + + I QYLPY+T WDYLAT+FTEAITVNG E LGNIQVPKR+ Y++
Subjt:  GCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGTTCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTATATCCGGTCTTGTTTCCACTTTTCCGGGATGCAACAAATTGCAGAAAACCCAACCAAT
TAGACAATATCTACCTTATCTAACACCTTGGGATTATTTAGCTACTATCTTTACAGAAGCAATAACTGTAAATGGTCAAGAACTCTTGGGAAATATTCAAGTACCTAAAA
GAAGTCTATATTTGCAGAGAAAGAGAATTAGTATATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGTTCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTATATCCGGTCTTGTTTCCACTTTTCCGGGATGCAACAAATTGCAGAAAACCCAACCAAT
TAGACAATATCTACCTTATCTAACACCTTGGGATTATTTAGCTACTATCTTTACAGAAGCAATAACTGTAAATGGTCAAGAACTCTTGGGAAATATTCAAGTACCTAAAA
GAAGTCTATATTTGCAGAGAAAGAGAATTAGTATATGA
Protein sequenceShow/hide protein sequence
MIGSVYKDFGFSHNDQIISGLVSTFPGCNKLQKTQPIRQYLPYLTPWDYLATIFTEAITVNGQELLGNIQVPKRSLYLQRKRISI