; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg26448 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26448
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCarg_Chr11:9678099..9680009
RNA-Seq ExpressionCarg26448
SyntenyCarg26448
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022927871.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita moschata]1.9e-146100Show/hide
Query:  MAATAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYRE
        MAATAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYRE
Subjt:  MAATAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYRE

Query:  AELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFF
        AELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFF
Subjt:  AELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFF

Query:  DPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        DPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  DPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_022939277.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita moschata]7.1e-14196.06Show/hide
Query:  AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        AATSGA+LNGLGSPFLHGGSRTQTLLAGARGGVNVV SRKLVIVAAAQPKKSWIPAVKGGGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELI
Subjt:  AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIF+GQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAGT+KDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  FAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_022988907.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]1.8e-144100Show/hide
Query:  AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_023531350.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita pepo subsp. pepo]9.5e-14699.61Show/hide
Query:  MAATAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYRE
        MAATAATSGALLNGLGSPFLHGGSRTQ LLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYRE
Subjt:  MAATAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYRE

Query:  AELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFF
        AELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFF
Subjt:  AELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFF

Query:  DPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        DPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  DPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_023550942.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita pepo subsp. pepo]5.4e-14196.06Show/hide
Query:  AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        AATSGA+LNGLGSPFLHGGSRTQTLLAGARGGVNVV SRKLVIVAAAQPKKSWIPAVKGGGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELI
Subjt:  AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIF+GQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAGT+KDGVYIPDTEKLERLKLAEIKHAR+AMLAMLIFYFEAGQGKTPLGALG+
Subjt:  FAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

TrEMBL top hitse value%identityAlignment
A0A6J1EIR2 Chlorophyll a-b binding protein, chloroplastic9.3e-147100Show/hide
Query:  MAATAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYRE
        MAATAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYRE
Subjt:  MAATAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYRE

Query:  AELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFF
        AELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFF
Subjt:  AELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFF

Query:  DPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        DPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  DPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1FGC5 Chlorophyll a-b binding protein, chloroplastic3.4e-14196.06Show/hide
Query:  AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        AATSGA+LNGLGSPFLHGGSRTQTLLAGARGGVNVV SRKLVIVAAAQPKKSWIPAVKGGGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELI
Subjt:  AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIF+GQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAGT+KDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  FAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1JEC2 Chlorophyll a-b binding protein, chloroplastic8.7e-145100Show/hide
Query:  AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1JU87 Chlorophyll a-b binding protein, chloroplastic1.3e-14096.06Show/hide
Query:  AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        AATSGA+LNGLGSPFL GGSRTQTLLAGARGGVNVV SRKLVIVAAAQPKKSWIPAVKGGGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELI
Subjt:  AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIF+GQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAGT+KDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  FAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

D1MWY9 Chlorophyll a-b binding protein, chloroplastic1.9e-13995.28Show/hide
Query:  AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        AATSG +LNGLGSPFL GGSRTQTLLAGARGGVNVV SRKLV+VAAAQPKKSWIPAVKGGGN IDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIF+GQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ+VEWATPW RTAENFAN TGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAGT+KDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic1.4e-3037.02Show/hide
Query:  GSRTQTLLAGARGGVN----VVSSRKLVI--VAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGI
        G+   + L G R  V+     V SR + +  VAA   +  W P          PEWLDGSLPGD+GFDPLGLG DP  LKW  +AEL+H RWAM    GI
Subjt:  GSRTQTLLAGARGGVN----VVSSRKLVI--VAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGI

Query:  FIGQAWSGI------PWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLK
        FI +  + I       W+ AG            +L   +L+L+GW E +RW D   P   + +   P      N    T + GYPGG +FDPLG+     
Subjt:  FIGQAWSGI------PWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLK

Query:  DGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFE
                 K++ L+  EIK+ R+AMLA++  +F+
Subjt:  DGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFE

P27524 Chlorophyll a-b binding protein CP24 10A, chloroplastic2.9e-12182.1Show/hide
Query:  AATSGALLNGLGSPFLHGGSRTQTLLA---GARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREA
        A TS A+LNGL S FL GG+++Q LLA    AR G      R  V+ AAA  KKSWIPAV+GGGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREA
Subjt:  AATSGALLNGLGSPFLHGGSRTQTLLA---GARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREA

Query:  ELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFD
        ELIHGRWAMAAV+GIF+GQAWSGIPWFEAGADP AIAPFSFG+LLGTQL+LMGWVESKRWVDFF+P+SQSVEWATPWS+TAENFAN TGEQGYPGGKFFD
Subjt:  ELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFD

Query:  PLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        PL  AGTL +GVY+PDTEKLERLK+AEIKHAR+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  PLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

P27525 Chlorophyll a-b binding protein CP24 10B, chloroplastic1.1e-12081.08Show/hide
Query:  MAATAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAA-QPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYR
        M  T+AT  A+LNGL S FL GG +TQ LL GA     V + ++ V+ AAA  PKKSWIPAVK GGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYR
Subjt:  MAATAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAA-QPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYR

Query:  EAELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKF
        EAELIHGRWAMAAV+GIF+GQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFF+ +SQS++WATPWS+TAENFAN TGEQGYPGGKF
Subjt:  EAELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKF

Query:  FDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FDPL  AGTL +GVY+PDTEKLERLKLAEIKH+R+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

P36494 Chlorophyll a-b binding protein CP24, chloroplastic3.8e-12180.08Show/hide
Query:  AATAATSGALLNGLGSPFLHGGSR-TQTLL---AGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKW
        AAT+AT  A++NG  SPFL GG + +Q+LL   +    GV+  S + +V+ AAA PKKSWIPAVKGGGNF+DPEWLDGSLPGD+GFDPLGLGKDPAFLKW
Subjt:  AATAATSGALLNGLGSPFLHGGSR-TQTLL---AGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKW

Query:  YREAELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGG
        YREAELIHGRWAM AV+GIF+GQAW+GIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFF+P+SQSVEWATPWSRTAENF+N+TGEQGYPGG
Subjt:  YREAELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGG

Query:  KFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        KFFDPL  AGT+ +GVY PDT+KLERLKLAEIKHAR+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  KFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

Q8LCQ4 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic6.2e-3142.08Show/hide
Query:  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAW------SGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVD
        PEWLDGSLPGD+GFDPLGLG DP  LKW+ +AELIH RWAM AV GI I +            W++AG+           +L   Q++LMGW E +RW D
Subjt:  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAW------SGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVD

Query:  FFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA
           P S  +E   P      +  N   + GYPGG +FD + +     + V +        L+  EIK+ R+AMLA L F F+A
Subjt:  FFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA

Arabidopsis top hitse value%identityAlignment
AT1G15820.1 light harvesting complex photosystem II subunit 67.8e-12281.96Show/hide
Query:  ATSGALLNGLGSPFLHGGSRTQTLLAGARG-GVNVVSSRKLVI-VAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        A SGA+L+GLGS FL GG R  T LA   G G   V  + L++  AAAQPKKSWIPAVKGGGNF+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  ATSGALLNGLGSPFLHGGSRTQTLLAGARG-GVNVVSSRKLVI-VAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAV+GIF+GQAWSG+ WFEAGA P AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNP+SQSVEWATPWS+TAENFAN TG+QGYPGG+FFDPL
Subjt:  IHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        G AG  +DGVY PD EKLERLKLAEIKH+R+AM+AMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

AT1G19150.1 photosystem I light harvesting complex gene 64.4e-3242.08Show/hide
Query:  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAW------SGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVD
        PEWLDGSLPGD+GFDPLGLG DP  LKW+ +AELIH RWAM AV GI I +            W++AG+           +L   Q++LMGW E +RW D
Subjt:  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAW------SGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVD

Query:  FFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA
           P S  +E   P      +  N   + GYPGG +FD + +     + V +        L+  EIK+ R+AMLA L F F+A
Subjt:  FFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA

AT1G45474.1 photosystem I light harvesting complex gene 51.7e-3138.1Show/hide
Query:  LLNGLGSPFLHGG-------SRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        L  G+   FLH         +R  + +  A GG+N            A  + +W+P +        P +LDG+L GDYGFDPLGLG+DP  LKWY +AEL
Subjt:  LLNGLGSPFLHGG-------SRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFIGQ--AWSGI----PWFEAGADPSAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGY
        +H R+AM  V GI        +GI     W+EAGA       F F S   L+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A   A    E GY
Subjt:  IHGRWAMAAVVGIFIGQ--AWSGI----PWFEAGADPSAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGY

Query:  PGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA
        PGG   +PLG A          D +     KL EIK+ R+AM+AML F+ +A
Subjt:  PGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA

AT1G45474.2 photosystem I light harvesting complex gene 51.7e-3138.1Show/hide
Query:  LLNGLGSPFLHGG-------SRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        L  G+   FLH         +R  + +  A GG+N            A  + +W+P +        P +LDG+L GDYGFDPLGLG+DP  LKWY +AEL
Subjt:  LLNGLGSPFLHGG-------SRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFIGQ--AWSGI----PWFEAGADPSAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGY
        +H R+AM  V GI        +GI     W+EAGA       F F S   L+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A   A    E GY
Subjt:  IHGRWAMAAVVGIFIGQ--AWSGI----PWFEAGADPSAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGY

Query:  PGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA
        PGG   +PLG A          D +     KL EIK+ R+AM+AML F+ +A
Subjt:  PGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA

AT3G61470.1 photosystem I light harvesting complex gene 21.9e-3035.55Show/hide
Query:  MAATAATSGALLNGLGSPFLHGGSRTQ-----TLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFL
        MA++   S A+   + SP   GG + +     T+ A +R   +V +      VAA   +  W P          PEWLDGSLPGD+GFDPLGL  DP  L
Subjt:  MAATAATSGALLNGLGSPFLHGGSRTQ-----TLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFL

Query:  KWYREAELIHGRWAMAAVVGIFIGQAWSGI------PWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANAT
        KW  +AE++H RWAM    GIFI +  + I       W+ AG            +L   +L+L+GW E +RW D   P S + +   P      N    T
Subjt:  KWYREAELIHGRWAMAAVVGIFIGQAWSGI------PWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANAT

Query:  GEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFE
         + GYPGG +FDPLG+              KL+ L+  EIK+ R+AMLA++  +F+
Subjt:  GEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAACGGCTGCAACTTCTGGTGCTCTGCTTAATGGGTTAGGCTCACCCTTCCTCCATGGAGGTAGCAGAACCCAAACCTTGCTGGCCGGTGCCAGAGGCGGTGT
CAATGTTGTCAGCTCTCGCAAGCTTGTCATCGTCGCTGCTGCTCAGCCCAAGAAGTCTTGGATCCCCGCCGTTAAGGGCGGCGGCAACTTCATCGACCCGGAATGGCTCG
ATGGCTCACTACCAGGCGATTACGGCTTCGACCCACTGGGGTTGGGGAAGGATCCAGCATTTCTGAAATGGTACAGAGAAGCAGAGCTAATCCACGGGCGGTGGGCAATG
GCAGCAGTGGTCGGAATCTTCATCGGCCAGGCCTGGAGCGGGATCCCATGGTTCGAAGCCGGAGCCGATCCGTCCGCAATCGCTCCATTCTCCTTCGGATCACTGCTCGG
AACACAGCTTCTACTAATGGGATGGGTCGAGAGCAAACGATGGGTAGATTTCTTCAACCCGGAGTCTCAATCCGTGGAATGGGCAACGCCATGGTCGAGGACCGCAGAGA
ACTTCGCAAACGCAACGGGAGAACAGGGGTACCCAGGAGGGAAATTCTTCGATCCATTGGGATTTGCAGGAACTCTCAAGGATGGAGTTTATATTCCAGACACGGAGAAA
TTGGAGAGATTGAAGCTGGCAGAGATCAAGCATGCGAGAATCGCCATGTTAGCTATGCTCATCTTCTACTTCGAAGCTGGACAGGGGAAGACGCCATTGGGGGCTCTTGG
ATTGTAG
mRNA sequenceShow/hide mRNA sequence
CACAACATCTCCCACAGACCCTTATCTTAAAATCATAAAACAAAGCTCACTACATACCTGAAACTTCCACATCTCAGAAGAAGCCATGGCTGCAACGGCTGCAACTTCTG
GTGCTCTGCTTAATGGGTTAGGCTCACCCTTCCTCCATGGAGGTAGCAGAACCCAAACCTTGCTGGCCGGTGCCAGAGGCGGTGTCAATGTTGTCAGCTCTCGCAAGCTT
GTCATCGTCGCTGCTGCTCAGCCCAAGAAGTCTTGGATCCCCGCCGTTAAGGGCGGCGGCAACTTCATCGACCCGGAATGGCTCGATGGCTCACTACCAGGCGATTACGG
CTTCGACCCACTGGGGTTGGGGAAGGATCCAGCATTTCTGAAATGGTACAGAGAAGCAGAGCTAATCCACGGGCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCATCG
GCCAGGCCTGGAGCGGGATCCCATGGTTCGAAGCCGGAGCCGATCCGTCCGCAATCGCTCCATTCTCCTTCGGATCACTGCTCGGAACACAGCTTCTACTAATGGGATGG
GTCGAGAGCAAACGATGGGTAGATTTCTTCAACCCGGAGTCTCAATCCGTGGAATGGGCAACGCCATGGTCGAGGACCGCAGAGAACTTCGCAAACGCAACGGGAGAACA
GGGGTACCCAGGAGGGAAATTCTTCGATCCATTGGGATTTGCAGGAACTCTCAAGGATGGAGTTTATATTCCAGACACGGAGAAATTGGAGAGATTGAAGCTGGCAGAGA
TCAAGCATGCGAGAATCGCCATGTTAGCTATGCTCATCTTCTACTTCGAAGCTGGACAGGGGAAGACGCCATTGGGGGCTCTTGGATTGTAG
Protein sequenceShow/hide protein sequence
MAATAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAM
AAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEK
LERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL