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Carg26452 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26452
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr11:9658417..9662886
RNA-Seq ExpressionCarg26452
SyntenyCarg26452
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022546.1 hypothetical protein SDJN02_16280, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-147100Show/hide
Query:  MGGDQIISNTSFSSPTDVGSHNLPPWGLASLLTYRPVSGSDTICSSPSSPPVDIVLFRFSLPGFSASASHHPVTGFDTICNSSNPRLVNIFLFRLLKKDK
        MGGDQIISNTSFSSPTDVGSHNLPPWGLASLLTYRPVSGSDTICSSPSSPPVDIVLFRFSLPGFSASASHHPVTGFDTICNSSNPRLVNIFLFRLLKKDK
Subjt:  MGGDQIISNTSFSSPTDVGSHNLPPWGLASLLTYRPVSGSDTICSSPSSPPVDIVLFRFSLPGFSASASHHPVTGFDTICNSSNPRLVNIFLFRLLKKDK

Query:  SASGGLELGLLHSILTWTLISEKFSSLKNQAECAYSTMFLKMAVIEFELVKYFSDCTTVVLTRQTVLYHRQPHGFKMRLLERCFHALMKKAKFESGIDSA
        SASGGLELGLLHSILTWTLISEKFSSLKNQAECAYSTMFLKMAVIEFELVKYFSDCTTVVLTRQTVLYHRQPHGFKMRLLERCFHALMKKAKFESGIDSA
Subjt:  SASGGLELGLLHSILTWTLISEKFSSLKNQAECAYSTMFLKMAVIEFELVKYFSDCTTVVLTRQTVLYHRQPHGFKMRLLERCFHALMKKAKFESGIDSA

Query:  VRKGFESYILVFSPFASPQRTEARNLLLPKHFLSQSLILSGASMEGNPSLKRRFLETEDSDSAKPPA
        VRKGFESYILVFSPFASPQRTEARNLLLPKHFLSQSLILSGASMEGNPSLKRRFLETEDSDSAKPPA
Subjt:  VRKGFESYILVFSPFASPQRTEARNLLLPKHFLSQSLILSGASMEGNPSLKRRFLETEDSDSAKPPA
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGTGATCAGATTATAAGCAATACTTCGTTTTCCTCTCCAACCGATGTGGGATCTCACAATCTACCCCCTTGGGGCCTAGCATCCTTGCTGACATATCGCCCAGT
ATCTGGCTCTGATACCATTTGTAGCAGCCCAAGCTCACCGCCAGTAGATATTGTCCTCTTTAGGTTTTCCCTTCCGGGCTTCTCCGCAAGTGCCTCGCACCATCCGGTGA
CTGGCTTTGATACCATTTGTAACAGCTCAAACCCACGGCTAGTAAATATTTTCCTATTTAGACTCCTCAAAAAGGACAAATCGGCGAGCGGTGGGCTTGAACTTGGACTA
TTACATTCTATATTGACTTGGACTCTAATTTCTGAGAAGTTTTCAAGCTTGAAAAACCAAGCTGAATGTGCTTATAGTACAATGTTCTTGAAGATGGCGGTTATAGAGTT
TGAACTTGTTAAATATTTTAGTGATTGTACTACAGTTGTTCTCACCCGGCAGACAGTTTTGTATCATCGTCAGCCTCACGGTTTTAAAATGCGTCTGTTAGAGAGATGTT
TCCACGCCCTTATGAAGAAGGCTAAATTTGAAAGCGGCATTGATTCTGCGGTGCGCAAAGGATTTGAATCTTATATTCTCGTTTTCTCGCCGTTTGCATCGCCACAAAGA
ACAGAAGCTCGTAATTTACTACTTCCAAAGCACTTTCTCTCTCAGTCGCTGATTCTGTCCGGTGCATCCATGGAGGGCAATCCATCGCTCAAGCGCCGGTTCTTAGAAAC
CGAAGATAGCGATTCTGCCAAACCACCTGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGTGATCAGATTATAAGCAATACTTCGTTTTCCTCTCCAACCGATGTGGGATCTCACAATCTACCCCCTTGGGGCCTAGCATCCTTGCTGACATATCGCCCAGT
ATCTGGCTCTGATACCATTTGTAGCAGCCCAAGCTCACCGCCAGTAGATATTGTCCTCTTTAGGTTTTCCCTTCCGGGCTTCTCCGCAAGTGCCTCGCACCATCCGGTGA
CTGGCTTTGATACCATTTGTAACAGCTCAAACCCACGGCTAGTAAATATTTTCCTATTTAGACTCCTCAAAAAGGACAAATCGGCGAGCGGTGGGCTTGAACTTGGACTA
TTACATTCTATATTGACTTGGACTCTAATTTCTGAGAAGTTTTCAAGCTTGAAAAACCAAGCTGAATGTGCTTATAGTACAATGTTCTTGAAGATGGCGGTTATAGAGTT
TGAACTTGTTAAATATTTTAGTGATTGTACTACAGTTGTTCTCACCCGGCAGACAGTTTTGTATCATCGTCAGCCTCACGGTTTTAAAATGCGTCTGTTAGAGAGATGTT
TCCACGCCCTTATGAAGAAGGCTAAATTTGAAAGCGGCATTGATTCTGCGGTGCGCAAAGGATTTGAATCTTATATTCTCGTTTTCTCGCCGTTTGCATCGCCACAAAGA
ACAGAAGCTCGTAATTTACTACTTCCAAAGCACTTTCTCTCTCAGTCGCTGATTCTGTCCGGTGCATCCATGGAGGGCAATCCATCGCTCAAGCGCCGGTTCTTAGAAAC
CGAAGATAGCGATTCTGCCAAACCACCTGCGTAA
Protein sequenceShow/hide protein sequence
MGGDQIISNTSFSSPTDVGSHNLPPWGLASLLTYRPVSGSDTICSSPSSPPVDIVLFRFSLPGFSASASHHPVTGFDTICNSSNPRLVNIFLFRLLKKDKSASGGLELGL
LHSILTWTLISEKFSSLKNQAECAYSTMFLKMAVIEFELVKYFSDCTTVVLTRQTVLYHRQPHGFKMRLLERCFHALMKKAKFESGIDSAVRKGFESYILVFSPFASPQR
TEARNLLLPKHFLSQSLILSGASMEGNPSLKRRFLETEDSDSAKPPA