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Carg26480 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26480
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEncodes a protein of unknown function that is a marker for oxidative stress response.
Genome locationCarg_Chr20:4287782..4288600
RNA-Seq ExpressionCarg26480
SyntenyCarg26480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605077.1 Epoxide hydrolase 3, partial [Cucurbita argyrosperma subsp. sororia]2.2e-3895.45Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE
        MEQQK+KPSAAANPPIPSCRKKKNE+ TFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVAD+NSETSGVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE

XP_022944752.1 uncharacterized protein LOC111449113 [Cucurbita moschata]9.1e-4098.86Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE
        MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADR+SETSGVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE

XP_022986651.1 uncharacterized protein LOC111484328 [Cucurbita maxima]7.0e-4098.86Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE
        ME+QKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE

XP_023006871.1 uncharacterized protein LOC111499535 [Cucurbita maxima]2.2e-3895.45Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE
        MEQQK+KPSAAANPPIPSCRKKKNE+ TFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVAD+NSETSGVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE

XP_023513344.1 uncharacterized protein LOC111777852 [Cucurbita pepo subsp. pepo]2.4e-40100Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE
        MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE

TrEMBL top hitse value%identityAlignment
A0A1S3CDL9 uncharacterized protein LOC1034996743.2e-3894.32Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE
        MEQQK+KPS AANPPIPSCRKKKNE+ TFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSET+GVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE

A0A5A7TRS7 Uncharacterized protein3.2e-3894.32Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE
        MEQQK+KPS AANPPIPSCRKKKNE+ TFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSET+GVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE

A0A6J1FYY5 uncharacterized protein LOC1114491134.4e-4098.86Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE
        MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADR+SETSGVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE

A0A6J1J859 uncharacterized protein LOC1114843283.4e-4098.86Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE
        ME+QKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE

A0A6J1KX05 uncharacterized protein LOC1114995351.1e-3895.45Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE
        MEQQK+KPSAAANPPIPSCRKKKNE+ TFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVAD+NSETSGVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21640.1 Encodes a protein of unknown function that is a marker for oxidative stress response.2.0e-1348.84Show/hide
Query:  NPPIP-----SCRKK-KNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKM---FRMSKVVADRNSETSG-VESSLPLRTTVSE
        NPP P     SCRK+ K+++ TF  +LKDH+DEFIHASMDEHK+CFK T++K+   F  ++ VA++  E    VE   PL+T V++
Subjt:  NPPIP-----SCRKK-KNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKM---FRMSKVVADRNSETSG-VESSLPLRTTVSE

AT3G05570.1 unknown protein9.1e-2257.78Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETS--GVESSLPLRTTVSE
        ME QK +      P   SCRKK  +D  FLED+KDHID+FI+ASMD+HK+CF KTI KMF +SK VAD+    +  GVES LPL+TTVS+
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETS--GVESSLPLRTTVSE

AT4G39235.1 unknown protein3.7e-2361.8Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNS-ETSGVESSLPLRTTVSE
        ME Q ++   +  P + SCRKK  +D TF ED+KDHID+FIHASMDEHKSCF+KTI KMF +SK VA++ + E  GVES LPL+TTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNS-ETSGVESSLPLRTTVSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAACAGAAAGATAAACCATCAGCTGCAGCAAACCCACCCATTCCTTCCTGTAGAAAGAAGAAAAATGAAGACGGTACATTCTTGGAGGATTTGAAGGATCACAT
CGACGAGTTCATTCATGCATCGATGGACGAACACAAATCGTGCTTCAAGAAAACTATCAACAAGATGTTCCGTATGTCAAAAGTTGTGGCAGATAGGAATTCAGAGACAA
GTGGAGTTGAAAGTTCTCTGCCTCTTCGAACAACAGTATCAGAGTAA
mRNA sequenceShow/hide mRNA sequence
TGACTTTATTTTGGGCTTCTCCAAAAGGCCTCAAGATGTATTCCTTACTTATAAAACCCATGACCATTCCCTAAATTAGCAAATGTGGAACTGAAACCACTCCCCTTTTA
GCTTTACTATTTTTCTCTCTCCAGCTAATTATATACCCATTTTTTCCCTCACAGCTACAACTTTGGTTCCAGGTTAGTACCAATGGAACAACAGAAAGATAAACCATCAG
CTGCAGCAAACCCACCCATTCCTTCCTGTAGAAAGAAGAAAAATGAAGACGGTACATTCTTGGAGGATTTGAAGGATCACATCGACGAGTTCATTCATGCATCGATGGAC
GAACACAAATCGTGCTTCAAGAAAACTATCAACAAGATGTTCCGTATGTCAAAAGTTGTGGCAGATAGGAATTCAGAGACAAGTGGAGTTGAAAGTTCTCTGCCTCTTCG
AACAACAGTATCAGAGTAAATTCTCTTTCTTCCTTTCTTCAAGGATACTTTGTCTGCATCTTCAACCAACTCCATGAAATCTTGGATTCCTGTTTATAGTCTATTTTACA
TGATTCCACATGAAACGTTACCGTTTTGTCTCCCTTGATGTGCTATTAATTGGTGTTATATTTTGAGCCACCAACCAATACTGTTCTTGGAATTTTTCTTGCTTGTTTGG
TTACCTCTTGATGCTTAGAGTTTATCTAAAAGGACTTGATTTCTGTTTCC
Protein sequenceShow/hide protein sequence
MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE