; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg26510 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26510
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDimer_Tnp_hAT domain-containing protein
Genome locationCarg_Chr13:4886469..4887972
RNA-Seq ExpressionCarg26510
SyntenyCarg26510
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019360.1 hypothetical protein SDJN02_18320, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-105100Show/hide
Query:  MRKYGLVDYTSHKALGFQHYFHIPATDEITPFHHQAPKLKEKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCL
        MRKYGLVDYTSHKALGFQHYFHIPATDEITPFHHQAPKLKEKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCL
Subjt:  MRKYGLVDYTSHKALGFQHYFHIPATDEITPFHHQAPKLKEKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCL

Query:  NELVFIKYNRALKRRYKIREVIDPISSKDIVDSTRRINDDSEDRDDLASDDDSLTSGNVSRETGPKELIYYLELILQEPRLKLHSVHPIVVGFKA
        NELVFIKYNRALKRRYKIREVIDPISSKDIVDSTRRINDDSEDRDDLASDDDSLTSGNVSRETGPKELIYYLELILQEPRLKLHSVHPIVVGFKA
Subjt:  NELVFIKYNRALKRRYKIREVIDPISSKDIVDSTRRINDDSEDRDDLASDDDSLTSGNVSRETGPKELIYYLELILQEPRLKLHSVHPIVVGFKA

XP_031737060.1 uncharacterized protein LOC101204843 [Cucumis sativus]2.5e-2953.47Show/hide
Query:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTR----R
        E W++FGQS PNLQ+FA+RILGLTCS +     + + +       QLH+K+RNRLA+S LN+LVFIKYNRALKRRY +R+++DPIS KDI DS      R
Subjt:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTR----R

Query:  INDDSEDRDDLASDDDSLTSGNVSRETGPKELIYYLELILQEPR
        ++DDSE+ D+L  +DDSLT G+VSR  G KE  +Y       P+
Subjt:  INDDSEDRDDLASDDDSLTSGNVSRETGPKELIYYLELILQEPR

XP_031739008.1 uncharacterized protein LOC116402801 [Cucumis sativus]2.5e-2953.47Show/hide
Query:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTR----R
        E W++FGQS PNLQ+FA+RILGLTCS +     + + +       QLH+K+RNRLA+S LN+LVFIKYNRALKRRY +R+++DPIS KDI DS      R
Subjt:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTR----R

Query:  INDDSEDRDDLASDDDSLTSGNVSRETGPKELIYYLELILQEPR
        ++DDSE+ D+L  +DDSLT G+VSR  G KE  +Y       P+
Subjt:  INDDSEDRDDLASDDDSLTSGNVSRETGPKELIYYLELILQEPR

XP_031743976.1 uncharacterized protein LOC105435864 [Cucumis sativus]2.5e-2953.47Show/hide
Query:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTR----R
        E W++FGQS PNLQ+FA+RILGLTCS +     + + +       QLH+K+RNRLA+S LN+LVFIKYNRALKRRY +R+++DPIS KDI DS      R
Subjt:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTR----R

Query:  INDDSEDRDDLASDDDSLTSGNVSRETGPKELIYYLELILQEPR
        ++DDSE+ D+L  +DDSLT G+VSR  G KE  +Y       P+
Subjt:  INDDSEDRDDLASDDDSLTSGNVSRETGPKELIYYLELILQEPR

XP_031745317.1 uncharacterized protein LOC116405444 [Cucumis sativus]2.5e-2953.47Show/hide
Query:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTR----R
        E W++FGQS PNLQ+FA+RILGLTCS +     + + +       QLH+K+RNRLA+S LN+LVFIKYNRALKRRY +R+++DPIS KDI DS      R
Subjt:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTR----R

Query:  INDDSEDRDDLASDDDSLTSGNVSRETGPKELIYYLELILQEPR
        ++DDSE+ D+L  +DDSLT G+VSR  G KE  +Y       P+
Subjt:  INDDSEDRDDLASDDDSLTSGNVSRETGPKELIYYLELILQEPR

TrEMBL top hitse value%identityAlignment
A0A5A7TBY2 Uncharacterized protein3.5e-2955.56Show/hide
Query:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTR----R
        E W++FGQS PNLQ+FA+RILGLTCS +     + + +       QLH+K+RNRLA+S LN+LVFIKYNRALKRRY +R+++DPIS +DI DS      R
Subjt:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTR----R

Query:  INDDSEDRDDLASDDDSLTSGNVSRETGPKELIYY
        ++DDSE+ D+L  DDD LT G+VSR  G KE  +Y
Subjt:  INDDSEDRDDLASDDDSLTSGNVSRETGPKELIYY

A0A5A7TY62 BED-type domain-containing protein3.5e-2955.56Show/hide
Query:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTR----R
        E W++FGQS PNLQ+FA+RILGLTCS +     + + +       QLH+K+RNRLA+S LN+LVFIKYNRALKRRY +R+++DPIS +DI DS      R
Subjt:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTR----R

Query:  INDDSEDRDDLASDDDSLTSGNVSRETGPKELIYY
        ++DDSE+ D+L  DDD LT G+VSR  G KE  +Y
Subjt:  INDDSEDRDDLASDDDSLTSGNVSRETGPKELIYY

A0A5A7U370 Uncharacterized protein3.5e-2955.56Show/hide
Query:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTR----R
        E W++FGQS PNLQ+FA+RILGLTCS +     + + +       QLH+K+RNRLA+S LN+LVFIKYNRALKRRY +R+++DPIS +DI DS      R
Subjt:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTR----R

Query:  INDDSEDRDDLASDDDSLTSGNVSRETGPKELIYY
        ++DDSE+ D+L  DDD LT G+VSR  G KE  +Y
Subjt:  INDDSEDRDDLASDDDSLTSGNVSRETGPKELIYY

A0A5A7UJ75 Dimer_Tnp_hAT domain-containing protein3.5e-2955.56Show/hide
Query:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTR----R
        E W++FGQS PNLQ+FA+RILGLTCS +     + + +       QLH+K+RNRLA+S LN+LVFIKYNRALKRRY +R+++DPIS +DI DS      R
Subjt:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTR----R

Query:  INDDSEDRDDLASDDDSLTSGNVSRETGPKELIYY
        ++DDSE+ D+L  DDD LT G+VSR  G KE  +Y
Subjt:  INDDSEDRDDLASDDDSLTSGNVSRETGPKELIYY

A0A5A7V8P5 BED-type domain-containing protein3.5e-2955.56Show/hide
Query:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTR----R
        E W++FGQS PNLQ+FA+RILGLTCS +     + + +       QLH+K+RNRLA+S LN+LVFIKYNRALKRRY +R+++DPIS +DI DS      R
Subjt:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTR----R

Query:  INDDSEDRDDLASDDDSLTSGNVSRETGPKELIYY
        ++DDSE+ D+L  DDD LT G+VSR  G KE  +Y
Subjt:  INDDSEDRDDLASDDDSLTSGNVSRETGPKELIYY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G79740.1 hAT transposon superfamily6.3e-0736.36Show/hide
Query:  WNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDI
        W  FG SAP LQ  A+RIL   CS  N+  ++     FQ    Q+H ++RN++    LN+L ++  N  L R   +    DPI+ +DI
Subjt:  WNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDI

AT3G22220.1 hAT transposon superfamily2.2e-0428.68Show/hide
Query:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTRRINDD
        E W+ +G+S  NL  FA+RIL  TCS +       +        +    + +N +    LN+LVF++YN  L+R      +    S  D VD     N  
Subjt:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDSTRRINDD

Query:  SEDRDDLASDDDSLTSGNVSRETGPKELI
         E  +D  S +     GN S +    E I
Subjt:  SEDRDDLASDDDSLTSGNVSRETGPKELI

AT4G15020.1 hAT transposon superfamily2.7e-0528.74Show/hide
Query:  DYTSHKALG--FQHYFHIPATDEITPFHHQAPKLKEKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVF
        + TS+K  G  F     I A D + P         E W+ +G+S  NL  FA+RIL  TCS +       +  E  Y       + +N + +  L++LVF
Subjt:  DYTSHKALG--FQHYFHIPATDEITPFHHQAPKLKEKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVF

Query:  IKYNRALKRRYKIREVIDPISSKDIVD--STRRINDDSEDRDDLASDDDSLTSGNVSRETGPKELIY
        ++YN  L++       + P S  D +D  S  RI+   E      S D +   GN S +    E I+
Subjt:  IKYNRALKRRYKIREVIDPISSKDIVD--STRRINDDSEDRDDLASDDDSLTSGNVSRETGPKELIY

AT4G15020.2 hAT transposon superfamily2.7e-0528.74Show/hide
Query:  DYTSHKALG--FQHYFHIPATDEITPFHHQAPKLKEKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVF
        + TS+K  G  F     I A D + P         E W+ +G+S  NL  FA+RIL  TCS +       +  E  Y       + +N + +  L++LVF
Subjt:  DYTSHKALG--FQHYFHIPATDEITPFHHQAPKLKEKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVF

Query:  IKYNRALKRRYKIREVIDPISSKDIVD--STRRINDDSEDRDDLASDDDSLTSGNVSRETGPKELIY
        ++YN  L++       + P S  D +D  S  RI+   E      S D +   GN S +    E I+
Subjt:  IKYNRALKRRYKIREVIDPISSKDIVD--STRRINDDSEDRDDLASDDDSLTSGNVSRETGPKELIY

AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related1.8e-1739.71Show/hide
Query:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDS----TRR
        E W+ +G S PNLQ FA+++L LTCS       + +   FQ     LH K+RNRL +  LN+++F+KYNRAL+RRYK  +  DPI   +I       T R
Subjt:  EKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNRALKRRYKIREVIDPISSKDIVDS----TRR

Query:  INDDSED--RDDLASDDDSLTSGNVSRETGPKELIY
        + ++S D   DDL  ++D LT   V    G  +  Y
Subjt:  INDDSED--RDDLASDDDSLTSGNVSRETGPKELIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAATATGGATTGGTCGATTATACATCTCACAAAGCGCTTGGATTTCAGCATTATTTCCATATACCTGCAACAGATGAAATAACCCCATTCCATCACCAAGCACC
AAAATTGAAGGAAAAGTGGAACGATTTTGGACAATCAGCTCCAAACTTGCAAGAGTTCGCCATGAGGATTTTAGGTCTTACTTGTAGTGATGCGAACATAATTGGAGAGT
TTTTTTTGGCAAAGGAATTTCAATATAAACGCTTGCAGCTTCATAACAAGCAAAGGAATAGGCTTGCAGAAAGTTGTTTGAATGAATTGGTGTTCATCAAATATAATAGG
GCATTGAAACGTCGATATAAAATTCGGGAAGTCATTGACCCCATCTCTTCAAAAGATATTGTTGACAGTACAAGAAGAATAAATGATGATTCTGAAGATCGGGATGATCT
TGCATCCGACGATGATTCTTTAACAAGTGGCAATGTTTCAAGAGAAACTGGACCAAAAGAACTTATCTATTATCTAGAGCTAATACTTCAAGAACCAAGACTAAAGCTCC
ATAGTGTCCATCCAATTGTTGTGGGGTTCAAGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAAAATATGGATTGGTCGATTATACATCTCACAAAGCGCTTGGATTTCAGCATTATTTCCATATACCTGCAACAGATGAAATAACCCCATTCCATCACCAAGCACC
AAAATTGAAGGAAAAGTGGAACGATTTTGGACAATCAGCTCCAAACTTGCAAGAGTTCGCCATGAGGATTTTAGGTCTTACTTGTAGTGATGCGAACATAATTGGAGAGT
TTTTTTTGGCAAAGGAATTTCAATATAAACGCTTGCAGCTTCATAACAAGCAAAGGAATAGGCTTGCAGAAAGTTGTTTGAATGAATTGGTGTTCATCAAATATAATAGG
GCATTGAAACGTCGATATAAAATTCGGGAAGTCATTGACCCCATCTCTTCAAAAGATATTGTTGACAGTACAAGAAGAATAAATGATGATTCTGAAGATCGGGATGATCT
TGCATCCGACGATGATTCTTTAACAAGTGGCAATGTTTCAAGAGAAACTGGACCAAAAGAACTTATCTATTATCTAGAGCTAATACTTCAAGAACCAAGACTAAAGCTCC
ATAGTGTCCATCCAATTGTTGTGGGGTTCAAGGCTTAG
Protein sequenceShow/hide protein sequence
MRKYGLVDYTSHKALGFQHYFHIPATDEITPFHHQAPKLKEKWNDFGQSAPNLQEFAMRILGLTCSDANIIGEFFLAKEFQYKRLQLHNKQRNRLAESCLNELVFIKYNR
ALKRRYKIREVIDPISSKDIVDSTRRINDDSEDRDDLASDDDSLTSGNVSRETGPKELIYYLELILQEPRLKLHSVHPIVVGFKA