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Carg26511 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26511
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCASP-like protein
Genome locationCarg_Chr13:4890357..4891008
RNA-Seq ExpressionCarg26511
SyntenyCarg26511
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652815.1 hypothetical protein Csa_023994, partial [Cucumis sativus]9.7e-1785.71Show/hide
Query:  SLDLWNRLSDHFRKSFCKE-QKELGWKNIFCRGLGVTAPKARTRDKPMLITAFLTL
        SLDLW R SDHFRKSFCKE Q+ELGW NIF RGLGVTAPKARTRDKPM  TAFLTL
Subjt:  SLDLWNRLSDHFRKSFCKE-QKELGWKNIFCRGLGVTAPKARTRDKPMLITAFLTL
KAF5470938.1 hypothetical protein F2P56_011422, partial [Juglans regia]3.8e-0566.67Show/hide
Query:  FRKSFCKEQKELGWKNIFCRGLGVTAPKARTRDKPM
        FR+SF +E K LGWK  F +G+GVT PKARTRDKP+
Subjt:  FRKSFCKEQKELGWKNIFCRGLGVTAPKARTRDKPM
KAG6583714.1 hypothetical protein SDJN03_19646, partial [Cucurbita argyrosperma subsp. sororia]4.8e-24100Show/hide
Query:  SLDLWNRLSDHFRKSFCKEQKELGWKNIFCRGLGVTAPKARTRDKPMLITAFLTL
        SLDLWNRLSDHFRKSFCKEQKELGWKNIFCRGLGVTAPKARTRDKPMLITAFLTL
Subjt:  SLDLWNRLSDHFRKSFCKEQKELGWKNIFCRGLGVTAPKARTRDKPMLITAFLTL
KAG7019361.1 hypothetical protein SDJN02_18321 [Cucurbita argyrosperma subsp. argyrosperma]2.1e-27100Show/hide
Query:  MVVDCSLDLWNRLSDHFRKSFCKEQKELGWKNIFCRGLGVTAPKARTRDKPMLITAFLTL
        MVVDCSLDLWNRLSDHFRKSFCKEQKELGWKNIFCRGLGVTAPKARTRDKPMLITAFLTL
Subjt:  MVVDCSLDLWNRLSDHFRKSFCKEQKELGWKNIFCRGLGVTAPKARTRDKPMLITAFLTL
TKR98526.1 Casparian strip membrane protein [Populus alba]1.7e-0557.41Show/hide
Query:  SLDLW----NRLSDHFRKSFCKEQKE---LGWKNIFCRGLGVTAPKARTRDKPM
        SL  W      L   FRKSF  + KE   LGWKN F  G+G+TAPKARTRDKPM
Subjt:  SLDLW----NRLSDHFRKSFCKEQKE---LGWKNIFCRGLGVTAPKARTRDKPM
TrEMBL top hitse value%identityAlignment
A0A4U5PQ38 CASP-like protein8.3e-0657.41Show/hide
Query:  SLDLW----NRLSDHFRKSFCKEQKE---LGWKNIFCRGLGVTAPKARTRDKPM
        SL  W      L   FRKSF  + KE   LGWKN F  G+G+TAPKARTRDKPM
Subjt:  SLDLW----NRLSDHFRKSFCKEQKE---LGWKNIFCRGLGVTAPKARTRDKPM
A0A6J5V571 Uncharacterized protein3.5e-0469.7Show/hide
Query:  RKSFCKEQKELGWKNIFCRGLGVTAPKARTRDK
        ++SF KEQ  LGWK  F +G+GVTAPKARTRDK
Subjt:  RKSFCKEQKELGWKNIFCRGLGVTAPKARTRDK
A0A7J8QTS9 Uncharacterized protein4.5e-0453.19Show/hide
Query:  RLSDHFRKSFCKEQKELGWKNIFCRGLGVTAPKARTRDKPMLITAFL
        RL    ++ F  E   LGWK  F +G+GVT PKARTRDKPM +T  L
Subjt:  RLSDHFRKSFCKEQKELGWKNIFCRGLGVTAPKARTRDKPMLITAFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGTTGATTGCAGCTTGGACTTGTGGAACCGCCTCTCTGATCATTTCCGGAAATCGTTTTGCAAGGAGCAGAAGGAGCTGGGCTGGAAGAATATATTCTGCCGAGG
GTTGGGTGTCACTGCTCCCAAGGCAAGAACTCGTGATAAACCCATGCTTATTACTGCCTTCTTGACTCTCTGA
mRNA sequenceShow/hide mRNA sequence
GCAAAAACCCTAAAATAATTTCCCTCTTTTCAATTCATTCCTTTCTTTTTGCTCTCCACTCCTTTTTTTTTTCTTCTTCTCCACTTCCTTCCCTCCTTCCTTCCTTCCTT
CTCAGATCCAACATTCCGCCCTTTCTTCTTCTCCAGGTGAGCATCTTACTCCCCCTCACTCAAATTTCCCCCTTATTTCTTCCTTTTCCTTTCCGATTTCGTCTTGATTC
TGTTGATCCGATCTTTCTTGCTCTTTTCTTCTTCTTTTCCTTTGTTTTGGTGGATAATTCTTTGATCAAGATTTTGAAACGTTACCGGTGGATAATTCTTGCCCTTTGTG
TTTGATTTTGTTTTTCCTGCTCTTAATTCTCTCTCTTTATCCATTTTCTTTGTCATTCATGGTTGTTGATTGCAGCTTGGACTTGTGGAACCGCCTCTCTGATCATTTCC
GGAAATCGTTTTGCAAGGAGCAGAAGGAGCTGGGCTGGAAGAATATATTCTGCCGAGGGTTGGGTGTCACTGCTCCCAAGGCAAGAACTCGTGATAAACCCATGCTTATT
ACTGCCTTCTTGACTCTCTGA
Protein sequenceShow/hide protein sequence
MVVDCSLDLWNRLSDHFRKSFCKEQKELGWKNIFCRGLGVTAPKARTRDKPMLITAFLTL