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Carg26520 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26520
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCyclin-dependent kinase inhibitor
Genome locationCarg_Chr18:1892105..1892761
RNA-Seq ExpressionCarg26520
SyntenyCarg26520
Gene Ontology termsGO:0006620 - posttranslational protein targeting to endoplasmic reticulum membrane (biological process)
GO:0010564 - regulation of cell cycle process (biological process)
GO:0030433 - ubiquitin-dependent ERAD pathway (biological process)
GO:0016020 - membrane (cellular component)
GO:0072380 - TRC complex (cellular component)
GO:0060090 - molecular adaptor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032664.1 cyclin-dependent protein kinase inhibitor SMR2 [Cucumis melo var. makuwa]2.0e-1366.67Show/hide
Query:  NECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSRWEA
        +EC+TP++ A RIP  SKCPP  ++KAV   K   PTSGYF PPDLDALFS+PPSSRWEA
Subjt:  NECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSRWEA
KAG6603646.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. sororia]3.7e-2083.33Show/hide
Query:  NECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSRWEA
        NEC+TPRN AFRIPAASKCPP  ++KAV   KQP PTSGYFHPPDLDALFSMPPSSRWEA
Subjt:  NECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSRWEA
KAG7012399.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-65100Show/hide
Query:  MRDRLRTRNECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSRWEALCLDGITNKQRHRTLHSLLKWVRDSSVKHSGI
        MRDRLRTRNECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSRWEALCLDGITNKQRHRTLHSLLKWVRDSSVKHSGI
Subjt:  MRDRLRTRNECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSRWEALCLDGITNKQRHRTLHSLLKWVRDSSVKHSGI

Query:  QGWQIPEKYCSTLDQWLV
        QGWQIPEKYCSTLDQWLV
Subjt:  QGWQIPEKYCSTLDQWLV
KGN54563.2 hypothetical protein Csa_017876 [Cucumis sativus]2.4e-1160Show/hide
Query:  NECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSRWEA
        +EC+TP++ A RIP   KCPP  ++K+    K   PT GYF PPDLD LFSMPPSSRWEA
Subjt:  NECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSRWEA
XP_018500496.1 PREDICTED: uncharacterized protein LOC108866402 [Pyrus x bretschneideri]4.7e-0752.73Show/hide
Query:  CVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSR
        C TP+    RIP A+ CPP   +KAV   K+  P +GYF PPDLD LFS+PP S+
Subjt:  CVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSR
TrEMBL top hitse value%identityAlignment
A0A0A0KXI9 Uncharacterized protein1.2e-1160Show/hide
Query:  NECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSRWEA
        +EC+TP++ A RIP   KCPP  ++K+    K   PT GYF PPDLD LFSMPPSSRWEA
Subjt:  NECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSRWEA
A0A498K4J3 Laccase3.0e-0739.51Show/hide
Query:  ECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSRWEALCL------DGITNKQRHRTLH
        +C TP+    RIP A+ CPP   +KAV   K+  P +GYF PPDLD LF++PP  R +  C+      + ++   RH T +
Subjt:  ECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSRWEALCL------DGITNKQRHRTLH
A0A540KLB4 Uncharacterized protein8.6e-0748.21Show/hide
Query:  ECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSR
        +C TP+    RIP A+ CPP   +KAV   K+  P +GYF PPDLD LF++PP ++
Subjt:  ECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSR
A0A5A7SNA9 Cyclin-dependent protein kinase inhibitor SMR29.5e-1466.67Show/hide
Query:  NECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSRWEA
        +EC+TP++ A RIP  SKCPP  ++KAV   K   PTSGYF PPDLDALFS+PPSSRWEA
Subjt:  NECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSRWEA
A0A5N5G2X8 Uncharacterized protein2.3e-0745.9Show/hide
Query:  LRTRNECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSR
        L+   +C TP+    RIP A+ CPP  ++KA    K+  P +GYF PPDLDALF++PP ++
Subjt:  LRTRNECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSR
SwissProt top hitse value%identityAlignment
Q1JPP8 Cyclin-dependent protein kinase inhibitor SMR44.9e-0748.08Show/hide
Query:  CVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPP
        C TPR+  +RIP AS CPP   +K +   K+  P +GYF PPDL+ LF   P
Subjt:  CVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPP
Arabidopsis top hitse value%identityAlignment
AT5G02220.1 unknown protein3.5e-0848.08Show/hide
Query:  CVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPP
        C TPR+  +RIP AS CPP   +K +   K+  P +GYF PPDL+ LF   P
Subjt:  CVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGATCGGCTACGAACGCGCAACGAATGTGTAACGCCGAGGAACGGCGCTTTTAGAATTCCGGCGGCATCCAAATGCCCGCCCACCGCCGAAGAGAAAGCGGTCCA
CTGGCCGAAGCAGCCTCTACCGACGAGTGGTTATTTCCACCCTCCCGATCTCGATGCTTTGTTTTCCATGCCGCCTTCATCACGATGGGAAGCTTTGTGTTTAGATGGCA
TCACGAACAAGCAACGCCACCGCACACTTCATTCGCTCTTGAAGTGGGTTAGAGATTCAAGTGTTAAACATTCAGGGATCCAAGGATGGCAAATCCCAGAAAAGTACTGC
TCAACTCTTGATCAATGGTTGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGATCGGCTACGAACGCGCAACGAATGTGTAACGCCGAGGAACGGCGCTTTTAGAATTCCGGCGGCATCCAAATGCCCGCCCACCGCCGAAGAGAAAGCGGTCCA
CTGGCCGAAGCAGCCTCTACCGACGAGTGGTTATTTCCACCCTCCCGATCTCGATGCTTTGTTTTCCATGCCGCCTTCATCACGATGGGAAGCTTTGTGTTTAGATGGCA
TCACGAACAAGCAACGCCACCGCACACTTCATTCGCTCTTGAAGTGGGTTAGAGATTCAAGTGTTAAACATTCAGGGATCCAAGGATGGCAAATCCCAGAAAAGTACTGC
TCAACTCTTGATCAATGGTTGGTGTGA
Protein sequenceShow/hide protein sequence
MRDRLRTRNECVTPRNGAFRIPAASKCPPTAEEKAVHWPKQPLPTSGYFHPPDLDALFSMPPSSRWEALCLDGITNKQRHRTLHSLLKWVRDSSVKHSGIQGWQIPEKYC
STLDQWLV