; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg26534 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26534
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLEA_2 domain-containing protein
Genome locationCarg_Chr18:1800778..1802579
RNA-Seq ExpressionCarg26534
SyntenyCarg26534
Gene Ontology termsGO:0098542 - defense response to other organism (biological process)
GO:0031224 - intrinsic component of membrane (cellular component)
InterPro domainsIPR044839 - Protein NDR1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573211.1 NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.1e-7089.94Show/hide
Query:  MEAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQNGSASSSLALNVTISNPNKMVGVFFDELN------NESVGSSSMSGF
        MEAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIP KPIFMISNMDLKPYQNGSASSSLALNVTISNPNKMVGVFFDELN      NESVGSSSMSGF
Subjt:  MEAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQNGSASSSLALNVTISNPNKMVGVFFDELN------NESVGSSSMSGF

Query:  YLESKRIDVHEVELGVNGLCGKVDLRVGLVTSVGYKIMWFKTKHRGFVIHGSAH-NPDG
        YLESKRIDVHEVELGVNGLCGKVDLRVGL TSVGYKIMWFKTKHRG V+    H  PDG
Subjt:  YLESKRIDVHEVELGVNGLCGKVDLRVGLVTSVGYKIMWFKTKHRGFVIHGSAH-NPDG

KAG7012385.1 NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-85100Show/hide
Query:  MEAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQNGSASSSLALNVTISNPNKMVGVFFDELNNESVGSSSMSGFYLESKR
        MEAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQNGSASSSLALNVTISNPNKMVGVFFDELNNESVGSSSMSGFYLESKR
Subjt:  MEAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQNGSASSSLALNVTISNPNKMVGVFFDELNNESVGSSSMSGFYLESKR

Query:  IDVHEVELGVNGLCGKVDLRVGLVTSVGYKIMWFKTKHRGFVIHGSAHNPDGPPSPPPPPPSPS
        IDVHEVELGVNGLCGKVDLRVGLVTSVGYKIMWFKTKHRGFVIHGSAHNPDGPPSPPPPPPSPS
Subjt:  IDVHEVELGVNGLCGKVDLRVGLVTSVGYKIMWFKTKHRGFVIHGSAHNPDGPPSPPPPPPSPS

XP_008441503.1 PREDICTED: NDR1/HIN1-Like protein 3-like isoform X2 [Cucumis melo]2.6e-3256.1Show/hide
Query:  MEAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQN-----GSASSSLALNVTISNPNKMVGVFFDEL------NNESV---
        M +K  S C+  IYIWFLQVLT+L LASLAIWA+L PK P F I+NMDLKPY       G+ SS LA NVTISNPNKM GVF DE+      NNESV   
Subjt:  MEAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQN-----GSASSSLALNVTISNPNKMVGVFFDEL------NNESV---

Query:  --GSSSMSGFYLESKRIDVHEVELGVNG----LCGKVD--LRVGLVTSVGYKIMWFKTKHRGFV
           S S++GFYL     D+ EV+L V      LC KVD  L+V L T V YK+MWFKT+HR  V
Subjt:  --GSSSMSGFYLESKRIDVHEVELGVNG----LCGKVD--LRVGLVTSVGYKIMWFKTKHRGFV

XP_022140153.1 cysteine-rich receptor-like protein kinase 10 [Momordica charantia]1.0e-3655Show/hide
Query:  EAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQNGSA----SSSLALNVTISNPNKMVGVFFDELN------NESVGSSSM
        + K   KCE S+YIWFLQV+TVLGL SLAIWAS+ PK P F ISN+DLKP+QN +A    SS +ALN+T+SNPN+M G+FFDE+N      N+SVG+ S+
Subjt:  EAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQNGSA----SSSLALNVTISNPNKMVGVFFDELN------NESVGSSSM

Query:  SGFYLESKRIDVHEVELGVN--GLCGKVDLRVGLVTSVGYKIMWFKTKHRGFVIHGSAHN
         GFYL  +  D  EVE+ VN     G+VDLRVGL T V YKI+ FK+++R  V      N
Subjt:  SGFYLESKRIDVHEVELGVN--GLCGKVDLRVGLVTSVGYKIMWFKTKHRGFVIHGSAHN

XP_038895943.1 uncharacterized protein LOC120084116 [Benincasa hispida]8.1e-4266.46Show/hide
Query:  AKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQNGSA----SSSLALNVTISNPNKMVGVFFDELN------NESV-----G
        AK  S CE SIYIWFLQVLT+LGL SLAIWA+L PK PIF ISNMDLKPYQN +     SSSLALNVTISN N+MVG+FFDELN      NES+      
Subjt:  AKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQNGSA----SSSLALNVTISNPNKMVGVFFDELN------NESV-----G

Query:  SSSMSGFYLESKRIDVHEVELGV--NG--LCGKVD--LRVGLVTSVGYKIMWFKTKHRGFV
        S S+SGFYL  K  D+ EV+LGV  NG  LCG VD  LRV L T V YKIMWFKTKHRG V
Subjt:  SSSMSGFYLESKRIDVHEVELGV--NG--LCGKVD--LRVGLVTSVGYKIMWFKTKHRGFV

TrEMBL top hitse value%identityAlignment
A0A0A0LRN3 Harpin inducing protein 1-like 91.2e-3057.52Show/hide
Query:  IYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPY-QNGSA-----SSSLALNVTISNPNKMVGVFFDEL------NNESV-----GSSSMSGFY
        IYIWFLQVLT+L LA LAIWA+L P+ P F I+NMDLKPY +N +A     SS LA NVTISNPNKM+GVF DE+      NNES+      S SM+GFY
Subjt:  IYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPY-QNGSA-----SSSLALNVTISNPNKMVGVFFDEL------NNESV-----GSSSMSGFY

Query:  LESKRIDVHEVELGVN----GLCGKVD--LRVGLVTSVGYKIMWFKTKHRGFV
        L     D+ EV+L V+     LC KVD  LRVG+ T V YKIMWF T+H G V
Subjt:  LESKRIDVHEVELGVN----GLCGKVD--LRVGLVTSVGYKIMWFKTKHRGFV

A0A1S3B3M5 NDR1/HIN1-Like protein 3-like isoform X11.3e-3256.1Show/hide
Query:  MEAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQN-----GSASSSLALNVTISNPNKMVGVFFDEL------NNESV---
        M +K  S C+  IYIWFLQVLT+L LASLAIWA+L PK P F I+NMDLKPY       G+ SS LA NVTISNPNKM GVF DE+      NNESV   
Subjt:  MEAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQN-----GSASSSLALNVTISNPNKMVGVFFDEL------NNESV---

Query:  --GSSSMSGFYLESKRIDVHEVELGVNG----LCGKVD--LRVGLVTSVGYKIMWFKTKHRGFV
           S S++GFYL     D+ EV+L V      LC KVD  L+V L T V YK+MWFKT+HR  V
Subjt:  --GSSSMSGFYLESKRIDVHEVELGVNG----LCGKVD--LRVGLVTSVGYKIMWFKTKHRGFV

A0A5A7URJ4 NDR1/HIN1-Like protein 3-like isoform X21.1e-2347.87Show/hide
Query:  MEAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQN-----GSASSSLALNVTISNPNKMVGVFFDEL------NNESV---
        M +K  S C+  IYIWFLQVLT+L LASLAIWA+L PK P F I+NMDLKPY       G+ SS LA NVTISNPNKM GVF DE+      NNESV   
Subjt:  MEAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQN-----GSASSSLALNVTISNPNKMVGVFFDEL------NNESV---

Query:  --GSSSMSGFYLESKRIDVHEVELGVNG----LCGKVDLRVGLVTSVGYKIMWFKTKHRGFVIHGSAHNPD------GPPSPPPPPPS
           S S++GFYL     D+ EV+L V      LC KVD  + + T+  ++I   + KH G    G+   PD      G  S  PP P+
Subjt:  --GSSSMSGFYLESKRIDVHEVELGVNG----LCGKVDLRVGLVTSVGYKIMWFKTKHRGFVIHGSAHNPD------GPPSPPPPPPS

A0A5D3BKC2 NDR1/HIN1-Like protein 3-like isoform X21.3e-3256.1Show/hide
Query:  MEAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQN-----GSASSSLALNVTISNPNKMVGVFFDEL------NNESV---
        M +K  S C+  IYIWFLQVLT+L LASLAIWA+L PK P F I+NMDLKPY       G+ SS LA NVTISNPNKM GVF DE+      NNESV   
Subjt:  MEAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQN-----GSASSSLALNVTISNPNKMVGVFFDEL------NNESV---

Query:  --GSSSMSGFYLESKRIDVHEVELGVNG----LCGKVD--LRVGLVTSVGYKIMWFKTKHRGFV
           S S++GFYL     D+ EV+L V      LC KVD  L+V L T V YK+MWFKT+HR  V
Subjt:  --GSSSMSGFYLESKRIDVHEVELGVNG----LCGKVD--LRVGLVTSVGYKIMWFKTKHRGFV

A0A6J1CHD2 cysteine-rich receptor-like protein kinase 105.0e-3755Show/hide
Query:  EAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQNGSA----SSSLALNVTISNPNKMVGVFFDELN------NESVGSSSM
        + K   KCE S+YIWFLQV+TVLGL SLAIWAS+ PK P F ISN+DLKP+QN +A    SS +ALN+T+SNPN+M G+FFDE+N      N+SVG+ S+
Subjt:  EAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQNGSA----SSSLALNVTISNPNKMVGVFFDELN------NESVGSSSM

Query:  SGFYLESKRIDVHEVELGVN--GLCGKVDLRVGLVTSVGYKIMWFKTKHRGFVIHGSAHN
         GFYL  +  D  EVE+ VN     G+VDLRVGL T V YKI+ FK+++R  V      N
Subjt:  SGFYLESKRIDVHEVELGVN--GLCGKVDLRVGLVTSVGYKIMWFKTKHRGFVIHGSAHN

SwissProt top hitse value%identityAlignment
Q9SRN1 NDR1/HIN1-like protein 21.3e-0532.63Show/hide
Query:  LQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQ---NGSASSSLALNVTISNPNKMVGVFFDELN------NESVGSSSMSGFYLESKRIDV
        + V  +LG+A+L +W    P    F +++ +L  +    N +   SL LN TI NPN+ VGV++DE +      ++  GS+++S FY   K   V
Subjt:  LQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQ---NGSASSSLALNVTISNPNKMVGVFFDELN------NESVGSSSMSGFYLESKRIDV

Arabidopsis top hitse value%identityAlignment
AT3G11650.1 NDR1/HIN1-like 29.1e-0732.63Show/hide
Query:  LQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQ---NGSASSSLALNVTISNPNKMVGVFFDELN------NESVGSSSMSGFYLESKRIDV
        + V  +LG+A+L +W    P    F +++ +L  +    N +   SL LN TI NPN+ VGV++DE +      ++  GS+++S FY   K   V
Subjt:  LQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQ---NGSASSSLALNVTISNPNKMVGVFFDELN------NESVGSSSMSGFYLESKRIDV

AT4G05220.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family3.8e-0537.31Show/hide
Query:  FLQVLTVLGLASLAIWASLIPKKPIFMISNMDLK--PYQNGSASSSLALNVTISNPNKMVGVFFDEL
        FL VL  +G+ +  +W SL P +P F I +  ++      G  ++ +A NVTI NPN+ +GV+FD +
Subjt:  FLQVLTVLGLASLAIWASLIPKKPIFMISNMDLK--PYQNGSASSSLALNVTISNPNKMVGVFFDEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCAAAAACGCCTCCAAATGCGAGTTTTCTATATACATATGGTTCCTACAAGTTCTAACAGTTCTAGGGTTAGCCTCTTTAGCCATATGGGCGAGCCTAATCCC
CAAGAAGCCTATCTTCATGATCTCCAACATGGATTTGAAGCCATATCAAAATGGTAGCGCTAGCTCTTCCTTAGCATTGAATGTGACGATCTCAAACCCCAACAAAATGG
TTGGTGTGTTCTTCGATGAGCTTAATAATGAGAGTGTCGGGTCGAGCTCGATGTCGGGATTTTATTTGGAAAGCAAGAGAATTGATGTGCATGAGGTTGAGTTGGGTGTG
AATGGGTTGTGTGGGAAGGTGGATTTGAGAGTTGGGTTGGTGACGAGTGTTGGATATAAGATTATGTGGTTCAAGACAAAGCATCGAGGTTTCGTTATCCATGGAAGCGC
TCACAACCCAGATGGACCCCCATCTCCTCCTCCGCCACCGCCGTCGCCGTCG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCCAAAAACGCCTCCAAATGCGAGTTTTCTATATACATATGGTTCCTACAAGTTCTAACAGTTCTAGGGTTAGCCTCTTTAGCCATATGGGCGAGCCTAATCCC
CAAGAAGCCTATCTTCATGATCTCCAACATGGATTTGAAGCCATATCAAAATGGTAGCGCTAGCTCTTCCTTAGCATTGAATGTGACGATCTCAAACCCCAACAAAATGG
TTGGTGTGTTCTTCGATGAGCTTAATAATGAGAGTGTCGGGTCGAGCTCGATGTCGGGATTTTATTTGGAAAGCAAGAGAATTGATGTGCATGAGGTTGAGTTGGGTGTG
AATGGGTTGTGTGGGAAGGTGGATTTGAGAGTTGGGTTGGTGACGAGTGTTGGATATAAGATTATGTGGTTCAAGACAAAGCATCGAGGTTTCGTTATCCATGGAAGCGC
TCACAACCCAGATGGACCCCCATCTCCTCCTCCGCCACCGCCGTCGCCGTCG
Protein sequenceShow/hide protein sequence
MEAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQNGSASSSLALNVTISNPNKMVGVFFDELNNESVGSSSMSGFYLESKRIDVHEVELGV
NGLCGKVDLRVGLVTSVGYKIMWFKTKHRGFVIHGSAHNPDGPPSPPPPPPSPS