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Carg26536 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26536
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr18:1793993..1794708
RNA-Seq ExpressionCarg26536
SyntenyCarg26536
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012383.1 hypothetical protein SDJN02_25135, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-58100Show/hide
Query:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
        SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
Subjt:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI

Query:  GSMVLICFTLAIGKPTAGELGFH
        GSMVLICFTLAIGKPTAGELGFH
Subjt:  GSMVLICFTLAIGKPTAGELGFH

XP_022955079.1 uncharacterized protein LOC111457151 isoform X1 [Cucurbita moschata]2.7e-58100Show/hide
Query:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
        SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
Subjt:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI

Query:  GSMVLICFTLAIGKPTAGELGFH
        GSMVLICFTLAIGKPTAGELGFH
Subjt:  GSMVLICFTLAIGKPTAGELGFH

XP_022955080.1 uncharacterized protein LOC111457151 isoform X2 [Cucurbita moschata]2.7e-58100Show/hide
Query:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
        SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
Subjt:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI

Query:  GSMVLICFTLAIGKPTAGELGFH
        GSMVLICFTLAIGKPTAGELGFH
Subjt:  GSMVLICFTLAIGKPTAGELGFH

XP_023542793.1 uncharacterized protein LOC111802598 isoform X1 [Cucurbita pepo subsp. pepo]4.5e-5393.5Show/hide
Query:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
        SNLSRK SQRGGDMMIATSSAPMAEKSA   AAEVALVVGSAKDHLGVQQFHHQITITT  TAA DEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
Subjt:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI

Query:  GSMVLICFTLAIGKPTAGELGFH
        GSMVLICFTLAIGKPTAGEL FH
Subjt:  GSMVLICFTLAIGKPTAGELGFH

XP_023542794.1 uncharacterized protein LOC111802598 isoform X2 [Cucurbita pepo subsp. pepo]4.5e-5393.5Show/hide
Query:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
        SNLSRK SQRGGDMMIATSSAPMAEKSA   AAEVALVVGSAKDHLGVQQFHHQITITT  TAA DEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
Subjt:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI

Query:  GSMVLICFTLAIGKPTAGELGFH
        GSMVLICFTLAIGKPTAGEL FH
Subjt:  GSMVLICFTLAIGKPTAGELGFH

TrEMBL top hitse value%identityAlignment
A0A6J1GU64 uncharacterized protein LOC111457151 isoform X21.3e-58100Show/hide
Query:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
        SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
Subjt:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI

Query:  GSMVLICFTLAIGKPTAGELGFH
        GSMVLICFTLAIGKPTAGELGFH
Subjt:  GSMVLICFTLAIGKPTAGELGFH

A0A6J1GUX4 uncharacterized protein LOC111457151 isoform X11.3e-58100Show/hide
Query:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
        SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
Subjt:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI

Query:  GSMVLICFTLAIGKPTAGELGFH
        GSMVLICFTLAIGKPTAGELGFH
Subjt:  GSMVLICFTLAIGKPTAGELGFH

A0A6J1K0E9 uncharacterized protein LOC111489966 isoform X21.7e-5090.24Show/hide
Query:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
        SNLSRK SQRGGDMMIATSSAPMAEK A  T AEVAL VGSAKDHLG+QQFHHQITITT +TAA DE ALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
Subjt:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI

Query:  GSMVLICFTLAIGKPTAGELGFH
        GSMVLICFTLAIGKP AGELGFH
Subjt:  GSMVLICFTLAIGKPTAGELGFH

A0A6J1K229 uncharacterized protein LOC111489966 isoform X11.7e-5090.24Show/hide
Query:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
        SNLSRK SQRGGDMMIATSSAPMAEK A  T AEVAL VGSAKDHLG+QQFHHQITITT +TAA DE ALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
Subjt:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI

Query:  GSMVLICFTLAIGKPTAGELGFH
        GSMVLICFTLAIGKP AGELGFH
Subjt:  GSMVLICFTLAIGKPTAGELGFH

A0A6J1KI90 uncharacterized protein LOC111495477 isoform X16.6e-3464.93Show/hide
Query:  NLSRKVSQRGGDMMIATSSAPMAEKSAAETAA-------------EVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPK
        NLSRK SQRGGD MIA+++APM   S++ T A              VA+ VGS +DHLGV Q HHQITITT+NTAA  E    RRNSFRR SSSWFLDPK
Subjt:  NLSRKVSQRGGDMMIATSSAPMAEKSAAETAA-------------EVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPK

Query:  KVLLFFATVSCIGSMVLICFTLAIGKPTAGELGF
        KVLL FATVSCIGSM+LI FTLAIGKP   E GF
Subjt:  KVLLFFATVSCIGSMVLICFTLAIGKPTAGELGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21215.1 unknown protein1.1e-1237.5Show/hide
Query:  SNLSRKV--SQRGGDMMIATSSAPMAEKSAAETAAEV-----ALVVGSAKDHLGVQQFHHQITITTSNTAAAD---------EHALFRRNSFRRSSSSWF
        SN  RK+     G D  I+   +P+   S  E A+ V     A    +A   +      HQIT+TT+ TAA +              R++SF+RS +SW 
Subjt:  SNLSRKV--SQRGGDMMIATSSAPMAEKSAAETAAEV-----ALVVGSAKDHLGVQQFHHQITITTSNTAAAD---------EHALFRRNSFRRSSSSWF

Query:  LDPKKVLLFFATVSCIGSMVLICFTLAIGKPTAGEL
        LDPKK++LFFAT+S +GS++LI FTL+I K   G++
Subjt:  LDPKKVLLFFATVSCIGSMVLICFTLAIGKPTAGEL

AT4G21215.2 unknown protein1.1e-1237.5Show/hide
Query:  SNLSRKV--SQRGGDMMIATSSAPMAEKSAAETAAEV-----ALVVGSAKDHLGVQQFHHQITITTSNTAAAD---------EHALFRRNSFRRSSSSWF
        SN  RK+     G D  I+   +P+   S  E A+ V     A    +A   +      HQIT+TT+ TAA +              R++SF+RS +SW 
Subjt:  SNLSRKV--SQRGGDMMIATSSAPMAEKSAAETAAEV-----ALVVGSAKDHLGVQQFHHQITITTSNTAAAD---------EHALFRRNSFRRSSSSWF

Query:  LDPKKVLLFFATVSCIGSMVLICFTLAIGKPTAGEL
        LDPKK++LFFAT+S +GS++LI FTL+I K   G++
Subjt:  LDPKKVLLFFATVSCIGSMVLICFTLAIGKPTAGEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTAATCTATCTCGAAAAGTGTCTCAGCGTGGCGGCGATATGATGATTGCTACCAGTTCCGCTCCTATGGCGGAAAAATCAGCGGCGGAAACGGCGGCGGAGGTGGCATT
GGTAGTTGGGTCTGCAAAAGACCATCTGGGTGTTCAACAATTTCATCATCAAATCACTATAACCACCAGCAACACGGCGGCGGCGGATGAACATGCTCTGTTTCGAAGAA
ACAGTTTCAGGAGGTCTTCTTCGTCCTGGTTTTTGGATCCCAAGAAAGTTCTTCTCTTCTTTGCCACTGTGTCATGTATTGGAAGTATGGTGCTGATATGCTTCACTCTG
GCCATCGGAAAACCCACCGCCGGCGAACTGGGGTTCCATTAA
mRNA sequenceShow/hide mRNA sequence
AGTAATCTATCTCGAAAAGTGTCTCAGCGTGGCGGCGATATGATGATTGCTACCAGTTCCGCTCCTATGGCGGAAAAATCAGCGGCGGAAACGGCGGCGGAGGTGGCATT
GGTAGTTGGGTCTGCAAAAGACCATCTGGGTGTTCAACAATTTCATCATCAAATCACTATAACCACCAGCAACACGGCGGCGGCGGATGAACATGCTCTGTTTCGAAGAA
ACAGTTTCAGGAGGTCTTCTTCGTCCTGGTTTTTGGATCCCAAGAAAGTTCTTCTCTTCTTTGCCACTGTGTCATGTATTGGAAGTATGGTGCTGATATGCTTCACTCTG
GCCATCGGAAAACCCACCGCCGGCGAACTGGGGTTCCATTAACGGCGAGGAAACCAAGAACTGCCATGGCAACACGATGAAAAATGTTTGGACAAAGCGATAGAAATAAC
GAGAAAGACAAAAGGGCAGCTTCAAAGTAAGAAAGTGACTAACAAAGGGAATCTTTCTCGAGCACTCGTATCCTTGAACCGATAACTATCTTTCAGCCCAATCCAGCTTT
TTCGTCCCTCCAAAAGGGTATTAAAAAAAAATAATAATAATCATATGAACCAAAATATCAACATCGAACAAAGTGTGAATAAAAATGT
Protein sequenceShow/hide protein sequence
SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCIGSMVLICFTL
AIGKPTAGELGFH