; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg26540 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26540
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUbiquitin carboxyl-terminal hydrolase 15
Genome locationCarg_Chr12:9180576..9181159
RNA-Seq ExpressionCarg26540
SyntenyCarg26540
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586147.1 hypothetical protein SDJN03_18880, partial [Cucurbita argyrosperma subsp. sororia]6.4e-6299.12Show/hide
Query:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
        MLRYGVVFRLIFVLFLAHDAIEATSNHGNRW DQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
Subjt:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC

Query:  SFTPKTCNCFGCHI
        SFTPKTCNCFGCHI
Subjt:  SFTPKTCNCFGCHI

XP_022937710.1 uncharacterized protein LOC111444031 [Cucurbita moschata]7.6e-63100Show/hide
Query:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
        MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
Subjt:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC

Query:  SFTPKTCNCFGCHI
        SFTPKTCNCFGCHI
Subjt:  SFTPKTCNCFGCHI

XP_022965498.1 uncharacterized protein LOC111465383 [Cucurbita maxima]2.1e-6097.37Show/hide
Query:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
        M  YGVVFRLIFVLFLAHDAIEATSNHGNRW DQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
Subjt:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC

Query:  SFTPKTCNCFGCHI
        SFTPKTCNCFGCHI
Subjt:  SFTPKTCNCFGCHI

XP_023536878.1 uncharacterized protein LOC111798131 [Cucurbita pepo subsp. pepo]1.4e-6198.25Show/hide
Query:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
        MLRYGVVFRLIFVLFLAHDAIEATSNHGNRW DQEPMMVPLMENVETMTAVAMNGNRRQL+SFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
Subjt:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC

Query:  SFTPKTCNCFGCHI
        SFTPKTCNCFGCHI
Subjt:  SFTPKTCNCFGCHI

XP_023546744.1 uncharacterized protein LOC111805758 [Cucurbita pepo subsp. pepo]1.3e-4680.7Show/hide
Query:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
        M  YGV+F LIF+LFLAH+AIEATS H N   DQEPMMVPLME +ET TA+ +NG RRQLRSFQ+CALCTCCGGARG+C+PSPCCYAINCNIPNRPFGFC
Subjt:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC

Query:  SFTPKTCNCFGCHI
        SFTP+TCNCFGCHI
Subjt:  SFTPKTCNCFGCHI

TrEMBL top hitse value%identityAlignment
A0A0A0LJJ1 Uncharacterized protein2.5e-4374.56Show/hide
Query:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
        M  YGV+F  I +LFLA +AIE TS H N   DQEP+MVPLME   T   +  +G RRQL+SFQ+CALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
Subjt:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC

Query:  SFTPKTCNCFGCHI
        SFTPKTCNCFGCHI
Subjt:  SFTPKTCNCFGCHI

A0A5D3C6S7 Ubiquitin carboxyl-terminal hydrolase 158.0e-4276.52Show/hide
Query:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMN-GNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGF
        M  YGV+F  IF+L LA +AIE TS   N   DQEP+MVPLME   T TA+ MN G RRQL+SFQ+CALCTCCGGARGMCLPSPCCYAINCNIPNRPFGF
Subjt:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMN-GNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGF

Query:  CSFTPKTCNCFGCHI
        CSFTPKTCNCFGCHI
Subjt:  CSFTPKTCNCFGCHI

A0A6J1D9H7 uncharacterized protein LOC111018147 isoform X13.8e-4480.87Show/hide
Query:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETM-TAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGF
        M  +GV F LIFVLFLA +AIEATS + N   DQEPMMVPLM   E M TAV M+G RR+LRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGF
Subjt:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETM-TAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGF

Query:  CSFTPKTCNCFGCHI
        CSFTPKTCNCFGCHI
Subjt:  CSFTPKTCNCFGCHI

A0A6J1FHK2 uncharacterized protein LOC1114440313.7e-63100Show/hide
Query:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
        MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
Subjt:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC

Query:  SFTPKTCNCFGCHI
        SFTPKTCNCFGCHI
Subjt:  SFTPKTCNCFGCHI

A0A6J1HP40 uncharacterized protein LOC1114653831.0e-6097.37Show/hide
Query:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
        M  YGVVFRLIFVLFLAHDAIEATSNHGNRW DQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
Subjt:  MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC

Query:  SFTPKTCNCFGCHI
        SFTPKTCNCFGCHI
Subjt:  SFTPKTCNCFGCHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G65295.1 unknown protein3.5e-3462.62Show/hide
Query:  LIFVLFL--AHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSFTPKTC
        L+F +F+  +H A E     G    D E MMVPL E       + MN  RR+L SFQ+C++CTCCGGA+G+CLPSPCCYAINCNIPNRPFG+CSFTPKTC
Subjt:  LIFVLFL--AHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSFTPKTC

Query:  NCFGCHI
        NCFGCHI
Subjt:  NCFGCHI

AT5G01015.1 unknown protein1.9e-1143.1Show/hide
Query:  RRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSFTPKTCNCFGCHI
        R+ +   ++C  C CC      C   PCC+ INC +PN+PFG C+F PK+C+C  C I
Subjt:  RRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSFTPKTCNCFGCHI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCGTTATGGCGTCGTATTTCGCCTCATTTTTGTGCTGTTTCTTGCCCACGACGCCATTGAAGCGACCTCAAACCACGGTAATCGGTGGTTCGATCAAGAACCGAT
GATGGTGCCATTAATGGAGAACGTTGAGACGATGACGGCGGTGGCGATGAATGGCAATCGGCGGCAGCTGAGGAGCTTCCAGGTTTGTGCTCTCTGTACCTGCTGCGGCG
GCGCTAGAGGAATGTGCCTTCCTTCTCCCTGTTGCTATGCCATAAACTGTAACATTCCTAATCGGCCCTTTGGCTTTTGCTCGTTTACTCCCAAGACCTGTAACTGCTTT
GGCTGCCATATTTGA
mRNA sequenceShow/hide mRNA sequence
AAATTCCACTTTCTCGACTTGAAAATCTTCTCAAAACCTCTCGAATTTCTCCATTTTTCTCAGAATGTTGCGTTATGGCGTCGTATTTCGCCTCATTTTTGTGCTGTTTC
TTGCCCACGACGCCATTGAAGCGACCTCAAACCACGGTAATCGGTGGTTCGATCAAGAACCGATGATGGTGCCATTAATGGAGAACGTTGAGACGATGACGGCGGTGGCG
ATGAATGGCAATCGGCGGCAGCTGAGGAGCTTCCAGGTTTGTGCTCTCTGTACCTGCTGCGGCGGCGCTAGAGGAATGTGCCTTCCTTCTCCCTGTTGCTATGCCATAAA
CTGTAACATTCCTAATCGGCCCTTTGGCTTTTGCTCGTTTACTCCCAAGACCTGTAACTGCTTTGGCTGCCATATTTGAGCTTAGTTCTTATATCTATCTCTGTTTATGA
CATTGAAAATTGTTCTTAATTGTTCTTAATTGTTCTTAATTGTTCTTAAT
Protein sequenceShow/hide protein sequence
MLRYGVVFRLIFVLFLAHDAIEATSNHGNRWFDQEPMMVPLMENVETMTAVAMNGNRRQLRSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSFTPKTCNCF
GCHI