; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg26561 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26561
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRNA exonuclease 4
Genome locationCarg_Chr02:10032963..10035754
RNA-Seq ExpressionCarg26561
SyntenyCarg26561
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013087 - Zinc finger C2H2-type
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606433.1 hypothetical protein SDJN03_03750, partial [Cucurbita argyrosperma subsp. sororia]1.5e-14381.14Show/hide
Query:  MTLYSAGDSETRVEAFRWTKIRVFEKACENVGLGRETTLPLRLLAKLSPLAALQRSRTIYSAILRFSIKRRNYHGSFYHHQRMPKCIFV--------YRH
        MTLYSAGDSETRVEAFRWTKI          GLG    L +R+ A +        +  ++S    F I RR +H       R  + I           RH
Subjt:  MTLYSAGDSETRVEAFRWTKIRVFEKACENVGLGRETTLPLRLLAKLSPLAALQRSRTIYSAILRFSIKRRNYHGSFYHHQRMPKCIFV--------YRH

Query:  KCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSLLP
        KCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSLLP
Subjt:  KCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSLLP

Query:  TDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGETIE
        TDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGETIE
Subjt:  TDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGETIE

Query:  RLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
        RLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
Subjt:  RLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR

KAG7036375.1 REX4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-188100Show/hide
Query:  MTLYSAGDSETRVEAFRWTKIRVFEKACENVGLGRETTLPLRLLAKLSPLAALQRSRTIYSAILRFSIKRRNYHGSFYHHQRMPKCIFVYRHKCSACYKQ
        MTLYSAGDSETRVEAFRWTKIRVFEKACENVGLGRETTLPLRLLAKLSPLAALQRSRTIYSAILRFSIKRRNYHGSFYHHQRMPKCIFVYRHKCSACYKQ
Subjt:  MTLYSAGDSETRVEAFRWTKIRVFEKACENVGLGRETTLPLRLLAKLSPLAALQRSRTIYSAILRFSIKRRNYHGSFYHHQRMPKCIFVYRHKCSACYKQ

Query:  YKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSLLPTDLSDCYD
        YKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSLLPTDLSDCYD
Subjt:  YKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSLLPTDLSDCYD

Query:  EDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGETIERLRLNGGK
        EDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGETIERLRLNGGK
Subjt:  EDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGETIERLRLNGGK

Query:  ARLLVGHDLEHDLDCLRMNYPDHMLR
        ARLLVGHDLEHDLDCLRMNYPDHMLR
Subjt:  ARLLVGHDLEHDLDCLRMNYPDHMLR

XP_022931094.1 uncharacterized protein LOC111437384 isoform X1 [Cucurbita moschata]9.6e-13599.58Show/hide
Query:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL
        RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL
Subjt:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL

Query:  LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGET
        LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAM LKEVQEKVLKILLNGET
Subjt:  LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGET

Query:  IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
        IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
Subjt:  IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR

XP_022931095.1 RNA exonuclease 4 isoform X2 [Cucurbita moschata]9.6e-13599.58Show/hide
Query:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL
        RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL
Subjt:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL

Query:  LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGET
        LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAM LKEVQEKVLKILLNGET
Subjt:  LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGET

Query:  IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
        IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
Subjt:  IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR

XP_023533248.1 uncharacterized protein LOC111795196 isoform X1 [Cucurbita pepo subsp. pepo]4.0e-13398.73Show/hide
Query:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL
        RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSL GHQDICRLTAPVRQGTSL
Subjt:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL

Query:  LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGET
        LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQP IPITNYRHEVTGLTEERVRYAM LKEVQEKVLKILLNGET
Subjt:  LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGET

Query:  IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
        IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
Subjt:  IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR

TrEMBL top hitse value%identityAlignment
A0A1S4E1J6 uncharacterized protein LOC1034959727.7e-11485.59Show/hide
Query:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL
        RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVC KHCKSFESLRE+L GPLSKS+CSKIF EQGCGLCLRVLD   +L  H +IC +TAPV QGTSL
Subjt:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL

Query:  LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGET
        LPTDLSDCY+EDRSDRGLGAIAMDCVMAGGGSDG LDIC+ ICLVDE EKLIFNTFVQP IPITNYRHEVTGL EE +RYAM L+ VQEKVLK+LLNGE+
Subjt:  LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGET

Query:  IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
        I RLR NGGKA+LLVGHDLEHDLD LRMNYPDHMLR
Subjt:  IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR

A0A6J1DNJ6 RNA exonuclease 42.2e-12188.56Show/hide
Query:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL
        RHKCSACYKQYKKKEHLIEHM+VSYHS+HQPRCGVC KHCKSFESLREHL GPLSKSNCSKIF+EQGCGLCLRVLD R SL  H+DIC LTAPV QGTSL
Subjt:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL

Query:  LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGET
        LPTDLSDCYDEDRSDR LGAIAMDCVMAGGGSDGTLD+C+G+CLVDE+EKLIFNTFV+P IPITNYRHEVTGLTEE +RYAM LKEVQEKVL+IL+NGE+
Subjt:  LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGET

Query:  IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
        I RLRLNGG+ARLLVGHDLEHDLDCLRMNYPDHMLR
Subjt:  IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR

A0A6J1ETD0 RNA exonuclease 44.6e-13599.58Show/hide
Query:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL
        RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL
Subjt:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL

Query:  LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGET
        LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAM LKEVQEKVLKILLNGET
Subjt:  LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGET

Query:  IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
        IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
Subjt:  IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR

A0A6J1EYI8 RNA exonuclease 44.6e-13599.58Show/hide
Query:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL
        RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL
Subjt:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL

Query:  LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGET
        LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAM LKEVQEKVLKILLNGET
Subjt:  LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGET

Query:  IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
        IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
Subjt:  IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR

A0A6J1K8M7 RNA exonuclease 41.6e-13297.88Show/hide
Query:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL
        RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSL GHQDICRLTAPVRQGTSL
Subjt:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSL

Query:  LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGET
        LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQP IPI NYRHEVTGLTEERVRYAM LKEVQEKVLKILLNGET
Subjt:  LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGET

Query:  IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
        IERLR+NGGKARLLVGHDLEHDLDCLRMNYPDHMLR
Subjt:  IERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR

SwissProt top hitse value%identityAlignment
Q08237 RNA exonuclease 41.0e-0931.9Show/hide
Query:  IAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGETIERLRLNGGKARLLVGHDLE
        IAMDC   G G +G       I +V+    ++ + FV+P   +  +R  V+G+  E ++ A++ KE Q+K   IL              + R+LVGH L+
Subjt:  IAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGETIERLRLNGGKARLLVGHDLE

Query:  HDLDCLRMNYPDHMLR
        HDL+ L +++P  +LR
Subjt:  HDLDCLRMNYPDHMLR

Q4IEV5 RNA exonuclease 41.4e-1132.76Show/hide
Query:  IAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGETIERLRLNGGKARLLVGHDLE
        IA+DC M G G  G       + +VD     I++++V+P   +TN+R  V+G++++ +R+A   +EVQ ++ K+L              + R+LVGHDL+
Subjt:  IAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGETIERLRLNGGKARLLVGHDLE

Query:  HDLDCLRMNYPDHMLR
        HDL+ L +++P   +R
Subjt:  HDLDCLRMNYPDHMLR

Q6BIK6 RNA exonuclease 47.6e-1031.03Show/hide
Query:  IAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGETIERLRLNGGKARLLVGHDLE
        +AMDC   G G +GT      + +V+     +F+ FV+P   +T++R  V+G+T + +  A+S +E Q +  K+L              + R+LVGH + 
Subjt:  IAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGETIERLRLNGGKARLLVGHDLE

Query:  HDLDCLRMNYPDHMLR
        HDLD L +++P   +R
Subjt:  HDLDCLRMNYPDHMLR

Q6PAQ4 RNA exonuclease 41.3e-0929.91Show/hide
Query:  AIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGETIERLRLNGGKARLLVGHDL
        A+A+DC M G G  G   I   + +V++  K +++ +V+P  P+T+YR  V+G+  E ++     + V+++V ++L              K R+LVGH L
Subjt:  AIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGETIERLRLNGGKARLLVGHDL

Query:  EHDLDCLRMNYPDHMLR
         +DL  L +++P   +R
Subjt:  EHDLDCLRMNYPDHMLR

Q9GZR2 RNA exonuclease 43.4e-1030.77Show/hide
Query:  AIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGETIERLRLNGGKARLLVGHDL
        A+A+DC M G G  G   +   + +V++  K +++ +V+P  P+T+YR  V+G+  E ++    L+ VQ++V ++L              K R+LVGH L
Subjt:  AIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGETIERLRLNGGKARLLVGHDL

Query:  EHDLDCLRMNYPDHMLR
         +DL  L +++P   +R
Subjt:  EHDLDCLRMNYPDHMLR

Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein7.4e-6950.84Show/hide
Query:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGP--LSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGT
        RH+C ACYK + ++EHL+EHM++SYHS+HQPRCGVC KHCKSFES+REHLN P  LSK NC  IF ++GC LCL++ ++  +L  H++ C L+ P   GT
Subjt:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGP--LSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGT

Query:  SLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNG
        S      S       +   L A+A+DC M GGG+DGT+D C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGLT+E ++  M L+ V+E+V   L  G
Subjt:  SLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNG

Query:  ETIERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
        +       +G    LLVGHDL HD+ CL++ YP H+LR
Subjt:  ETIERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR

AT2G48100.2 Exonuclease family protein7.4e-6950.84Show/hide
Query:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGP--LSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGT
        RH+C ACYK + ++EHL+EHM++SYHS+HQPRCGVC KHCKSFES+REHLN P  LSK NC  IF ++GC LCL++ ++  +L  H++ C L+ P   GT
Subjt:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGP--LSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGT

Query:  SLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNG
        S      S       +   L A+A+DC M GGG+DGT+D C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGLT+E ++  M L+ V+E+V   L  G
Subjt:  SLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNG

Query:  ETIERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
        +       +G    LLVGHDL HD+ CL++ YP H+LR
Subjt:  ETIERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR

AT2G48100.3 Exonuclease family protein7.4e-6950.84Show/hide
Query:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGP--LSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGT
        RH+C ACYK + ++EHL+EHM++SYHS+HQPRCGVC KHCKSFES+REHLN P  LSK NC  IF ++GC LCL++ ++  +L  H++ C L+ P   GT
Subjt:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGP--LSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGT

Query:  SLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNG
        S      S       +   L A+A+DC M GGG+DGT+D C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGLT+E ++  M L+ V+E+V   L  G
Subjt:  SLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNG

Query:  ETIERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
        +       +G    LLVGHDL HD+ CL++ YP H+LR
Subjt:  ETIERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR

AT2G48100.4 Exonuclease family protein7.4e-6950.84Show/hide
Query:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGP--LSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGT
        RH+C ACYK + ++EHL+EHM++SYHS+HQPRCGVC KHCKSFES+REHLN P  LSK NC  IF ++GC LCL++ ++  +L  H++ C L+ P   GT
Subjt:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGP--LSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGT

Query:  SLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNG
        S      S       +   L A+A+DC M GGG+DGT+D C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGLT+E ++  M L+ V+E+V   L  G
Subjt:  SLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNG

Query:  ETIERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
        +       +G    LLVGHDL HD+ CL++ YP H+LR
Subjt:  ETIERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR

AT3G27970.1 Exonuclease family protein5.3e-6749.59Show/hide
Query:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQG--T
        R+KC+ACY+Q+ K EHL+EHM++SYHS H+P CGVC+KHC+SFESLREHL GPL K  C  IF  +GC  C+ +L+   S R HQ+ C+ ++ V  G  T
Subjt:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQG--T

Query:  SLLPTDLSD----CYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKI
         +    L D     Y   RS R    +A+ C M GGGSDG+LD+C  +C+ DE + +IF+T+V+P + +T+YR+E TG+  E +R AM LK+VQ K+ + 
Subjt:  SLLPTDLSD----CYDEDRSDRGLGAIAMDCVMAGGGSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKI

Query:  LLNGETIERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR
        L NGE + ++R  GGKAR+LVGH L+HDLD L++ YP  M+R
Subjt:  LLNGETIERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATTGTATTCAGCGGGTGATAGTGAAACCAGGGTTGAGGCCTTCCGGTGGACAAAAATTAGGGTTTTCGAAAAAGCTTGTGAGAATGTGGGCCTGGGGCGGGAAAC
AACTCTTCCACTGCGTCTTCTAGCCAAACTATCACCACTTGCAGCTCTGCAGCGATCACGAACGATCTATTCAGCCATCCTTCGCTTTTCTATCAAAAGAAGAAACTATC
ATGGCAGCTTCTATCACCACCAAAGAATGCCTAAGTGTATATTTGTTTACAGACATAAATGCTCTGCATGCTACAAGCAATATAAGAAGAAAGAGCATCTTATTGAACAC
ATGAGAGTTTCGTATCACTCTGTTCATCAGCCTAGATGTGGGGTCTGCCAAAAGCACTGCAAATCATTTGAATCATTGAGGGAACATCTAAATGGTCCACTTTCAAAATC
AAATTGTTCAAAAATTTTCTTGGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGATCGCACATCTCTCAGAGGGCATCAAGACATTTGCCGCTTAACAGCTCCTG
TTCGCCAAGGAACAAGTCTATTGCCAACTGATTTATCAGATTGTTATGATGAAGACCGTTCTGATCGAGGCCTTGGAGCAATAGCTATGGATTGTGTAATGGCTGGCGGT
GGAAGTGATGGCACACTGGACATTTGTATTGGGATCTGCCTTGTTGATGAAGACGAGAAATTGATTTTCAATACTTTTGTACAACCACATATACCAATCACGAATTACAG
GCATGAAGTAACTGGGCTAACGGAAGAACGTGTAAGGTATGCCATGTCACTGAAAGAAGTCCAAGAAAAAGTATTAAAAATCTTGTTAAATGGGGAAACCATCGAGAGAT
TGAGATTGAATGGAGGTAAAGCTAGGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCTTGAGAATGAATTATCCTGATCATATGTTAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACATTGTATTCAGCGGGTGATAGTGAAACCAGGGTTGAGGCCTTCCGGTGGACAAAAATTAGGGTTTTCGAAAAAGCTTGTGAGAATGTGGGCCTGGGGCGGGAAAC
AACTCTTCCACTGCGTCTTCTAGCCAAACTATCACCACTTGCAGCTCTGCAGCGATCACGAACGATCTATTCAGCCATCCTTCGCTTTTCTATCAAAAGAAGAAACTATC
ATGGCAGCTTCTATCACCACCAAAGAATGCCTAAGTGTATATTTGTTTACAGACATAAATGCTCTGCATGCTACAAGCAATATAAGAAGAAAGAGCATCTTATTGAACAC
ATGAGAGTTTCGTATCACTCTGTTCATCAGCCTAGATGTGGGGTCTGCCAAAAGCACTGCAAATCATTTGAATCATTGAGGGAACATCTAAATGGTCCACTTTCAAAATC
AAATTGTTCAAAAATTTTCTTGGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGATCGCACATCTCTCAGAGGGCATCAAGACATTTGCCGCTTAACAGCTCCTG
TTCGCCAAGGAACAAGTCTATTGCCAACTGATTTATCAGATTGTTATGATGAAGACCGTTCTGATCGAGGCCTTGGAGCAATAGCTATGGATTGTGTAATGGCTGGCGGT
GGAAGTGATGGCACACTGGACATTTGTATTGGGATCTGCCTTGTTGATGAAGACGAGAAATTGATTTTCAATACTTTTGTACAACCACATATACCAATCACGAATTACAG
GCATGAAGTAACTGGGCTAACGGAAGAACGTGTAAGGTATGCCATGTCACTGAAAGAAGTCCAAGAAAAAGTATTAAAAATCTTGTTAAATGGGGAAACCATCGAGAGAT
TGAGATTGAATGGAGGTAAAGCTAGGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCTTGAGAATGAATTATCCTGATCATATGTTAAGGTGA
Protein sequenceShow/hide protein sequence
MTLYSAGDSETRVEAFRWTKIRVFEKACENVGLGRETTLPLRLLAKLSPLAALQRSRTIYSAILRFSIKRRNYHGSFYHHQRMPKCIFVYRHKCSACYKQYKKKEHLIEH
MRVSYHSVHQPRCGVCQKHCKSFESLREHLNGPLSKSNCSKIFLEQGCGLCLRVLDDRTSLRGHQDICRLTAPVRQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGG
GSDGTLDICIGICLVDEDEKLIFNTFVQPHIPITNYRHEVTGLTEERVRYAMSLKEVQEKVLKILLNGETIERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLR