; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg26564 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26564
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionexosome complex component RRP4 homolog
Genome locationCarg_Chr02:10040624..10044517
RNA-Seq ExpressionCarg26564
SyntenyCarg26564
Gene Ontology termsGO:0000178 - exosome (RNase complex) (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004088 - K Homology domain, type 1
IPR012340 - Nucleic acid-binding, OB-fold
IPR022967 - RNA-binding domain, S1
IPR026699 - Exosome complex RNA-binding protein 1/RRP40/RRP4
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606437.1 Exosome complex component RRP4-like protein, partial [Cucurbita argyrosperma subsp. sororia]8.1e-17796.18Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRA             RY
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY

Query:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
        KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
Subjt:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY

Query:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
        LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
Subjt:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM

Query:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG
        ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG
Subjt:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG

KAG7036378.1 Exosome complex component RRP4-like protein [Cucurbita argyrosperma subsp. argyrosperma]1.9e-186100Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY

Query:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
        KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
Subjt:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY

Query:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
        LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
Subjt:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM

Query:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG
        ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG
Subjt:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG

XP_022931250.1 exosome complex component RRP4 homolog [Cucurbita moschata]1.5e-17596.15Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRA             RY
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY

Query:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
        KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
Subjt:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY

Query:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
        LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
Subjt:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM

Query:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKK
        ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKK
Subjt:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKK

XP_022995373.1 exosome complex component RRP4 homolog [Cucurbita maxima]6.8e-17695.88Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDL GEVVATICGVVERVNKLIYVRALRA             RY
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY

Query:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
        KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
Subjt:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY

Query:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
        LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
Subjt:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM

Query:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG
        ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG
Subjt:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG

XP_023533481.1 exosome complex component RRP4 homolog [Cucurbita pepo subsp. pepo]5.2e-17695.59Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRA             RY
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY

Query:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
        KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
Subjt:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY

Query:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
        LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEG+FGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
Subjt:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM

Query:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG
        ETVSL ISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG
Subjt:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG

TrEMBL top hitse value%identityAlignment
A0A6J1DNK7 exosome complex component RRP4 homolog isoform X21.3e-15985.34Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY
        MRGLQ+SLNQTQKIRLQ ALE+LESIS KANSDASV+VADTIP+NYEDG+LKGHGT DL+GEVVAT+CGVVERVNKLIYVRALRA             RY
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY

Query:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
        KPEVGDI+VGRV EVAPKRWRLDINYSQ AVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
Subjt:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY

Query:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGN-QVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVI
        LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDP EDMM+ED +NK EQKG K EG+FGN + QER+YTPLETR+NICR ANA+RVLS LGFI++VEVI
Subjt:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGN-QVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVI

Query:  METVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG
        METV+LS+SLNIDVHEMLGSEFCVL AE E ERRTSSKKRG
Subjt:  METVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG

A0A6J1EXY1 exosome complex component RRP4 homolog7.4e-17696.15Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRA             RY
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY

Query:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
        KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
Subjt:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY

Query:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
        LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
Subjt:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM

Query:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKK
        ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKK
Subjt:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKK

A0A6J1HGD9 exosome complex component RRP4 homolog isoform X11.3e-16991.18Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY
        MR LQ+SLNQTQKIRLQRALE LESISSKANSDASV+VADTIPLNY+DGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRA             RY
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY

Query:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
        KPEVGDIIVGRVTEVAPKRWRL+INYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
Subjt:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY

Query:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
        LVKRRKQHFHHLEQYGIDLI GCNGFIWIGEHVDPTEDMM+ED +NKSEQKGSKFEG+FGNQVQER+YTPLETRQNICRTANAIRVLS LGFIM+VEVIM
Subjt:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM

Query:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG
        ETVSLS SLNI+VHEMLGSEFCVLTAEKEAERRTSSKKRG
Subjt:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG

A0A6J1HVC7 exosome complex component RRP4 homolog isoform X13.4e-16589.12Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY
        MR LQ+SLNQTQ+IRLQRALE LESISSKANSDASV+VADTIPLNY+DGVLKGHGTLDLNGEVVATICGVVER+NKLIYVRALRA             RY
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY

Query:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
        KPEVGDIIVGRVTEVAPKRWRL+INYSQDAVLMLSSMNLPDGIQRR+TA DELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGK+ERGQLLTVSPY
Subjt:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY

Query:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
        LVKRRKQHFHHLEQYGIDLI GCNGFI IGE VDPTEDMM+ED +NKSEQKGSKFEG+FGNQVQER+YTPLETRQNICRTANAIRVLS LGFIM+VEVIM
Subjt:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM

Query:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG
        ETVSLS+SLNI+VHEMLGSEFCVLTAEKEAERRTSSKKRG
Subjt:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG

A0A6J1K7S0 exosome complex component RRP4 homolog3.3e-17695.88Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDL GEVVATICGVVERVNKLIYVRALRA             RY
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY

Query:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
        KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
Subjt:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY

Query:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
        LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
Subjt:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM

Query:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG
        ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG
Subjt:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKRG

SwissProt top hitse value%identityAlignment
Q09704 Exosome complex component rrp49.3e-4340.74Show/hide
Query:  LKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRYKPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAV
        ++GHGT   +G + A++ G V+RVNKLI V+ LR+             +Y PE+GD+I+G++ EV PKRW++DI   Q+AVLMLSS+NLP GIQRR+   
Subjt:  LKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRYKPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAV

Query:  DELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSE
        DEL MR+ F+E D++ AEV+ +  DG + +  RS KYGKL  G  L V P LV R K H + L   G+D+IL  NG++W+ +H    E+      I + E
Subjt:  DELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSE

Query:  QKGSKFEGSFGNQVQE-RIYTPLE-TRQNICRTANAIRVL-----SILGFIMSVEVIMETVSLSISLNID
        ++ S  E  + N+  E   YT L  +R +IC    A R L     SI  F  S  V      L++  N+D
Subjt:  QKGSKFEGSFGNQVQE-RIYTPLE-TRQNICRTANAIRVL-----SILGFIMSVEVIMETVSLSISLNID

Q13868 Exosome complex component RRP43.0e-4147.71Show/hide
Query:  KIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRYKPEVGDIIVGRV
        ++RL  A + L     +      VV  DTI    + G ++GHGT     +++A++ G VERVNKLI V+AL+              RY  EVGDI+VGR+
Subjt:  KIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRYKPEVGDIIVGRV

Query:  TEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHH
        TEV  KRW+++ N   D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH 
Subjt:  TEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHH

Query:  LEQYGIDLILGCNGFIWI
        L   G  +ILG NGFIWI
Subjt:  LEQYGIDLILGCNGFIWI

Q2KID0 Exosome complex component RRP43.5e-4246.26Show/hide
Query:  KIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRYKPEVGDIIVGRV
        ++RL  A + L     + +    VV  DTI    + G ++GHGT     +++A++ G VERVNKLI V+AL+              RY  EVGDI+VGR+
Subjt:  KIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRYKPEVGDIIVGRV

Query:  TEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHH
        TEV  KRW+++ N   D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH 
Subjt:  TEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHH

Query:  LEQYGIDLILGCNGFIWIGEHVDPTED
        L   G  +ILG NGFIW+    +  ED
Subjt:  LEQYGIDLILGCNGFIWIGEHVDPTED

Q8VBV3 Exosome complex component RRP41.2e-4247.35Show/hide
Query:  KIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRYKPEVGDIIVGRV
        ++RL +A + L     + +    VV  DTI    + G ++GHGT     +++A++ G VERVNKLI V+AL+              RY  EVGDI+VGR+
Subjt:  KIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRYKPEVGDIIVGRV

Query:  TEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHH
        TEV  KRW+++ N   D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH 
Subjt:  TEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHH

Query:  LEQYGIDLILGCNGFIWI---GEHVD
        L   G  +ILG NGFIWI    EH D
Subjt:  LEQYGIDLILGCNGFIWI---GEHVD

Q9ZVT7 Exosome complex component RRP4 homolog9.7e-11763.82Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY
        MR LQ+ L+QTQK+R +RA+E L+S+SS ANSDASV+V D+IP+N++D  LKGHGT +++GE++AT+CGVVERV+KL+YVR LRA             RY
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY

Query:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSP
        KPEVGDI+VGRV EVA KRWR+++N++QD VLMLSSMN+PDGIQRRRT+VDELNMR IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+GQLL V P
Subjt:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSP

Query:  YLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVI
        YLVKR K HFH++E  GIDLI+GCNGFIW+GEHV+      V DP+   +QK  +   S  +  +E+ + PLETRQ ICR  NAIRVLS LGF +++EVI
Subjt:  YLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVI

Query:  METVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKR
        METV+LS S NID+H+MLGSEF V+ AE EAERR + +K+
Subjt:  METVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKR

Arabidopsis top hitse value%identityAlignment
AT1G03360.1 ribosomal RNA processing 46.9e-11863.82Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY
        MR LQ+ L+QTQK+R +RA+E L+S+SS ANSDASV+V D+IP+N++D  LKGHGT +++GE++AT+CGVVERV+KL+YVR LRA             RY
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRY

Query:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSP
        KPEVGDI+VGRV EVA KRWR+++N++QD VLMLSSMN+PDGIQRRRT+VDELNMR IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+GQLL V P
Subjt:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSP

Query:  YLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVI
        YLVKR K HFH++E  GIDLI+GCNGFIW+GEHV+      V DP+   +QK  +   S  +  +E+ + PLETRQ ICR  NAIRVLS LGF +++EVI
Subjt:  YLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVI

Query:  METVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKR
        METV+LS S NID+H+MLGSEF V+ AE EAERR + +K+
Subjt:  METVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSSKKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGATTACAAGTTTCCTTGAATCAAACCCAGAAGATTCGGCTTCAAAGAGCCCTAGAAACGCTCGAGTCTATCTCTTCGAAAGCCAATTCCGATGCTTCAGTTGT
AGTTGCTGATACTATTCCTCTCAATTACGAGGATGGTGTCCTCAAGGGACATGGAACCCTTGACTTGAATGGAGAAGTAGTTGCCACTATTTGTGGAGTGGTTGAGCGAG
TCAATAAGCTTATCTATGTACGTGCCTTACGTGCCAGGGCGTCTTTTCTGATGCATTTGTCTGTATTGTTTATTAGATATAAACCAGAGGTTGGTGATATCATAGTGGGG
CGTGTTACGGAGGTTGCTCCCAAACGTTGGAGATTGGATATAAATTATAGCCAAGATGCTGTTTTGATGCTTTCTTCTATGAACTTGCCTGATGGTATTCAGAGGAGACG
AACTGCAGTGGATGAACTCAACATGCGGACCATTTTTGAAGAAAATGATGTTATTTGCGCAGAAGTTCGTGGTTTCCAGCATGATGGCCTACACCTTCAGGCAAGAAGCC
AGAAATATGGGAAGCTTGAAAGAGGTCAGCTTCTCACAGTTTCACCGTATCTAGTAAAGAGACGCAAACAGCACTTCCATCATTTGGAGCAGTATGGAATTGACTTAATA
CTTGGATGCAATGGATTTATCTGGATTGGGGAGCATGTTGATCCTACAGAGGATATGATGGTAGAAGATCCAATTAATAAATCTGAACAGAAGGGTTCAAAATTTGAAGG
AAGTTTTGGTAACCAAGTGCAAGAAAGAATATATACTCCATTGGAGACACGTCAGAATATATGCAGAACTGCAAACGCCATTCGAGTATTGTCTATCTTAGGTTTCATAA
TGTCAGTAGAAGTCATAATGGAGACAGTAAGTCTAAGTATTTCTCTGAACATCGATGTGCATGAAATGCTTGGGTCGGAGTTCTGTGTTCTCACTGCAGAAAAAGAGGCT
GAGCGGCGGACTTCGAGTAAGAAGAGGGGATGA
mRNA sequenceShow/hide mRNA sequence
ATAATTGTTGATTTCGTAACCATGTTTTGGAAAAATAAAACACAATAAGGTCATTTGATTTTGGCGCAGTTTCTTAAGGTCGTCCGTGTACAAAAACTCATTTATTTTCT
TCTCCCTCCCTTTTTTTTCCTATGAACCCTAGATTTACGCTGTCACTCTGCTAAGAAGCCGCCGTCCACGTCCATCGTCGCCGTCGCACCACTTTGTCAAGACCCACCGT
GTTTCATCCCCCTCCCCGTTCTCTTCGACGGAATCCTAGATCTTCACTGCCGCCTTCCATCGCCTCGTTCCAGGGTCACTGCCGTCGCTGCATAGACGGCACCTGGTTGG
CCTGTTGTACCTTTCGCCGTCGCACCTGTCGTGACTCGAAGAAATGATTATGTTGCGACGTTGCTAGTCCTTATTTGTATATGAGAGGATTACAAGTTTCCTTGAATCAA
ACCCAGAAGATTCGGCTTCAAAGAGCCCTAGAAACGCTCGAGTCTATCTCTTCGAAAGCCAATTCCGATGCTTCAGTTGTAGTTGCTGATACTATTCCTCTCAATTACGA
GGATGGTGTCCTCAAGGGACATGGAACCCTTGACTTGAATGGAGAAGTAGTTGCCACTATTTGTGGAGTGGTTGAGCGAGTCAATAAGCTTATCTATGTACGTGCCTTAC
GTGCCAGGGCGTCTTTTCTGATGCATTTGTCTGTATTGTTTATTAGATATAAACCAGAGGTTGGTGATATCATAGTGGGGCGTGTTACGGAGGTTGCTCCCAAACGTTGG
AGATTGGATATAAATTATAGCCAAGATGCTGTTTTGATGCTTTCTTCTATGAACTTGCCTGATGGTATTCAGAGGAGACGAACTGCAGTGGATGAACTCAACATGCGGAC
CATTTTTGAAGAAAATGATGTTATTTGCGCAGAAGTTCGTGGTTTCCAGCATGATGGCCTACACCTTCAGGCAAGAAGCCAGAAATATGGGAAGCTTGAAAGAGGTCAGC
TTCTCACAGTTTCACCGTATCTAGTAAAGAGACGCAAACAGCACTTCCATCATTTGGAGCAGTATGGAATTGACTTAATACTTGGATGCAATGGATTTATCTGGATTGGG
GAGCATGTTGATCCTACAGAGGATATGATGGTAGAAGATCCAATTAATAAATCTGAACAGAAGGGTTCAAAATTTGAAGGAAGTTTTGGTAACCAAGTGCAAGAAAGAAT
ATATACTCCATTGGAGACACGTCAGAATATATGCAGAACTGCAAACGCCATTCGAGTATTGTCTATCTTAGGTTTCATAATGTCAGTAGAAGTCATAATGGAGACAGTAA
GTCTAAGTATTTCTCTGAACATCGATGTGCATGAAATGCTTGGGTCGGAGTTCTGTGTTCTCACTGCAGAAAAAGAGGCTGAGCGGCGGACTTCGAGTAAGAAGAGGGGA
TGATTTGGTTTTCAAAATTGTGTAATTCACTCTTGATGGAAATTTTGCTACGAACAACTTGATTTTCTGAGGAACTCACTATGAGATCTTAGTTTGTGGAATTTTATGAT
GCCGACGATTGGTCTGCTACTAGTGTTAACATTATAGAATGCAATATTTGCTTAATTATTCTGTAGTAAGTGGTTTCATAAATTCACTAAACTTTATAAAATGTAGTATT
TTCGCGGATGATATTTTTATTTGCCTACTCATTTGTATTACCGTAAAGGAATCGTTCATTCTGCGGTGTCTGTGACCAACCCAATGTAAGCTCTATGTGGAAGTTGATCA
ATTCTCTAAGTTACCAGGCAATGGAACAACGTCCGAGCAGACCAC
Protein sequenceShow/hide protein sequence
MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARASFLMHLSVLFIRYKPEVGDIIVG
RVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLI
LGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDVHEMLGSEFCVLTAEKEA
ERRTSSKKRG