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Carg26583 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26583
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr02:4341254..4342415
RNA-Seq ExpressionCarg26583
SyntenyCarg26583
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605444.1 hypothetical protein SDJN03_02761, partial [Cucurbita argyrosperma subsp. sororia]4.5e-3795.1Show/hide
Query:  SMPNLGLESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQE
        S   L  ESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQE
Subjt:  SMPNLGLESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQE

Query:  ED
        ED
Subjt:  ED

KAG7035392.1 hypothetical protein SDJN02_02188, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-101100Show/hide
Query:  MAADRVLLCIVSLQRRGRNDLVDLDSEDASATEAVRESEARPWLPPHPLPYRYRFSSPLPIQTPTSFHLSVPHLLPLLHPSISLADRQLSFSSKIVQDEA
        MAADRVLLCIVSLQRRGRNDLVDLDSEDASATEAVRESEARPWLPPHPLPYRYRFSSPLPIQTPTSFHLSVPHLLPLLHPSISLADRQLSFSSKIVQDEA
Subjt:  MAADRVLLCIVSLQRRGRNDLVDLDSEDASATEAVRESEARPWLPPHPLPYRYRFSSPLPIQTPTSFHLSVPHLLPLLHPSISLADRQLSFSSKIVQDEA

Query:  QSEGSMPNLGLESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQK
        QSEGSMPNLGLESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQK
Subjt:  QSEGSMPNLGLESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQK

Query:  VEQEED
        VEQEED
Subjt:  VEQEED

XP_022947295.1 uncharacterized protein LOC111451198 [Cucurbita moschata]1.7e-3666.87Show/hide
Query:  TPTSFHLSVPHLLPLLHPSI----SLADRQLSFSSK-----------IVQDEAQSEG-------SMPNLGLESAALVEKSQEIASTGDDGVSTIISVLLF
        T TS  LS+P  L   +P+     SL     SF+S            ++Q+  +          S   L  ESAALVEKSQEIASTGDDGVSTIISVLLF
Subjt:  TPTSFHLSVPHLLPLLHPSI----SLADRQLSFSSK-----------IVQDEAQSEG-------SMPNLGLESAALVEKSQEIASTGDDGVSTIISVLLF

Query:  VAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED
        VAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED
Subjt:  VAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED

XP_023007015.1 uncharacterized protein LOC111499635 [Cucurbita maxima]1.3e-3694.12Show/hide
Query:  SMPNLGLESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQE
        S   L  ESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAK GPRGFGQKVEQE
Subjt:  SMPNLGLESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQE

Query:  ED
        ED
Subjt:  ED

XP_023532311.1 uncharacterized protein LOC111794502 [Cucurbita pepo subsp. pepo]2.9e-3692.16Show/hide
Query:  SMPNLGLESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQE
        S   L  ESAALVEKSQEIASTGDDGVSTIISVLLFVAF+GLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKK+VKVKA+AGPRGFGQKVEQE
Subjt:  SMPNLGLESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQE

Query:  ED
        ED
Subjt:  ED

TrEMBL top hitse value%identityAlignment
A0A1S3CM77 uncharacterized protein LOC1035020671.4e-2863.23Show/hide
Query:  RFSSPLPIQTPTSFHLSVPHLLPLLHPSISLADRQLSFSSKIVQDEAQSEGSMPNLGLESAALV-EKSQEI-ASTGDDGVSTIISVLLFVAFVGLSVLTI
        R SS  P   P+S  LS    LPLL+P      +QLSFSS        +  S   L  +SAALV EKSQ+I  ST DDGVSTIISVLLF+AF+GLS+LTI
Subjt:  RFSSPLPIQTPTSFHLSVPHLLPLLHPSISLADRQLSFSSKIVQDEAQSEGSMPNLGLESAALV-EKSQEI-ASTGDDGVSTIISVLLFVAFVGLSVLTI

Query:  GVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED
        GVIYI VTDFLQKREKEKFEKEEA  KK   KKK KV+A+ GPRGFGQKVE+EED
Subjt:  GVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED

A0A5A7V864 Uncharacterized protein1.4e-2863.23Show/hide
Query:  RFSSPLPIQTPTSFHLSVPHLLPLLHPSISLADRQLSFSSKIVQDEAQSEGSMPNLGLESAALV-EKSQEI-ASTGDDGVSTIISVLLFVAFVGLSVLTI
        R SS  P   P+S  LS    LPLL+P      +QLSFSS        +  S   L  +SAALV EKSQ+I  ST DDGVSTIISVLLF+AF+GLS+LTI
Subjt:  RFSSPLPIQTPTSFHLSVPHLLPLLHPSISLADRQLSFSSKIVQDEAQSEGSMPNLGLESAALV-EKSQEI-ASTGDDGVSTIISVLLFVAFVGLSVLTI

Query:  GVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED
        GVIYI VTDFLQKREKEKFEKEEA  KK   KKK KV+A+ GPRGFGQKVE+EED
Subjt:  GVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED

A0A6J1D484 uncharacterized protein LOC1110171138.2e-2981.37Show/hide
Query:  SMPNLGLESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSVLTIGVIYIAVTDFLQKREKEKFEK-EEAANKKSGKKKKVKVKAKAGPRGFGQKVEQ
        S   L  ESAALVEKSQEI S+GDDGVSTIIS LLFVAF+GLS+LTIGVIYIAVTDFLQKREKEKFEK E A NKKSGKKK  KV+A+AGPRGFGQK+E+
Subjt:  SMPNLGLESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSVLTIGVIYIAVTDFLQKREKEKFEK-EEAANKKSGKKKKVKVKAKAGPRGFGQKVEQ

Query:  EE
        EE
Subjt:  EE

A0A6J1G6G9 uncharacterized protein LOC1114511988.2e-3766.87Show/hide
Query:  TPTSFHLSVPHLLPLLHPSI----SLADRQLSFSSK-----------IVQDEAQSEG-------SMPNLGLESAALVEKSQEIASTGDDGVSTIISVLLF
        T TS  LS+P  L   +P+     SL     SF+S            ++Q+  +          S   L  ESAALVEKSQEIASTGDDGVSTIISVLLF
Subjt:  TPTSFHLSVPHLLPLLHPSI----SLADRQLSFSSK-----------IVQDEAQSEG-------SMPNLGLESAALVEKSQEIASTGDDGVSTIISVLLF

Query:  VAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED
        VAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED
Subjt:  VAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED

A0A6J1L1T3 uncharacterized protein LOC1114996356.3e-3794.12Show/hide
Query:  SMPNLGLESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQE
        S   L  ESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAK GPRGFGQKVEQE
Subjt:  SMPNLGLESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQE

Query:  ED
        ED
Subjt:  ED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G29180.1 unknown protein9.9e-1947.17Show/hide
Query:  QTPTSFHLSVPHLLPLLHPSISLADRQ-LSFS-SKIVQDEAQSEGSMPNLGLESAALVEKSQEIAST-------------GDDGVSTIISVLLFVAFVGL
        QTP   H    H+ PL   S S++ R+ LSF   ++ Q++ Q       L   SA   E SQEI S+             G DGV+ II VLLFVAF+ L
Subjt:  QTPTSFHLSVPHLLPLLHPSISLADRQ-LSFS-SKIVQDEAQSEGSMPNLGLESAALVEKSQEIAST-------------GDDGVSTIISVLLFVAFVGL

Query:  SVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEE
        +VLTIGV+YI VT+FL KRE+EKFEK+EAA K     KK  ++A+AGPRGFGQK+E ++
Subjt:  SVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTGATCGCGTGCTGCTTTGCATTGTCTCTTTACAACGACGAGGACGAAACGATCTTGTGGATCTGGACAGCGAGGATGCGTCTGCCACTGAAGCAGTGAGAGA
AAGCGAAGCGCGGCCATGGCTACCACCACATCCACTTCCCTATCGCTACCGATTTTCCTCTCCTCTTCCAATCCAAACTCCTACAAGCTTCCATCTCTCCGTTCCTCATC
TGCTTCCTTTGCTTCATCCTTCAATCTCTCTCGCCGACCGGCAGCTCTCGTTCTCATCCAAAATCGTCCAAGACGAGGCTCAATCCGAAGGCTCCATGCCAAACCTTGGC
CTCGAATCCGCCGCGCTGGTGGAGAAATCACAGGAGATAGCATCGACTGGTGACGACGGCGTATCCACCATAATCTCTGTTCTTCTGTTTGTCGCTTTCGTCGGTCTATC
TGTTCTCACAATCGGGGTAATCTACATTGCTGTGACGGATTTCTTGCAGAAGAGGGAGAAGGAAAAGTTTGAGAAAGAGGAGGCGGCTAACAAGAAGAGCGGAAAGAAGA
AGAAGGTGAAGGTTAAGGCCAAAGCTGGACCCAGGGGATTCGGCCAGAAGGTCGAACAAGAAGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCTGATCGCGTGCTGCTTTGCATTGTCTCTTTACAACGACGAGGACGAAACGATCTTGTGGATCTGGACAGCGAGGATGCGTCTGCCACTGAAGCAGTGAGAGA
AAGCGAAGCGCGGCCATGGCTACCACCACATCCACTTCCCTATCGCTACCGATTTTCCTCTCCTCTTCCAATCCAAACTCCTACAAGCTTCCATCTCTCCGTTCCTCATC
TGCTTCCTTTGCTTCATCCTTCAATCTCTCTCGCCGACCGGCAGCTCTCGTTCTCATCCAAAATCGTCCAAGACGAGGCTCAATCCGAAGGCTCCATGCCAAACCTTGGC
CTCGAATCCGCCGCGCTGGTGGAGAAATCACAGGAGATAGCATCGACTGGTGACGACGGCGTATCCACCATAATCTCTGTTCTTCTGTTTGTCGCTTTCGTCGGTCTATC
TGTTCTCACAATCGGGGTAATCTACATTGCTGTGACGGATTTCTTGCAGAAGAGGGAGAAGGAAAAGTTTGAGAAAGAGGAGGCGGCTAACAAGAAGAGCGGAAAGAAGA
AGAAGGTGAAGGTTAAGGCCAAAGCTGGACCCAGGGGATTCGGCCAGAAGGTCGAACAAGAAGAGGATTGATGTTATCACCAGCTGTTGATCTTATTCTTGCTCGTTTAA
TTTTCCATAAATCCAGTTTAATTTGCTGAGTTAGGGCATCCTAAATTTTCTCGTTGGAATTGGAATGATCAATCCAGATTAACTCGATTGAATTTTGTTTGATTTTTAAT
CATCTACCTCGAACTATGAGTAATTCAACCATTCTAAATTTGGAAAGTTTATGACCTCAGCTAGGATAAGCCTAACGTTTTAACTAA
Protein sequenceShow/hide protein sequence
MAADRVLLCIVSLQRRGRNDLVDLDSEDASATEAVRESEARPWLPPHPLPYRYRFSSPLPIQTPTSFHLSVPHLLPLLHPSISLADRQLSFSSKIVQDEAQSEGSMPNLG
LESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSVLTIGVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED