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Carg26587 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26587
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMajor viral transcription factor
Genome locationCarg_Chr02:4330478..4330894
RNA-Seq ExpressionCarg26587
SyntenyCarg26587
Gene Ontology termsNA
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570684.1 hypothetical protein SDJN03_29599, partial [Cucurbita argyrosperma subsp. sororia]6.4e-4873.38Show/hide
Query:  MNANQAFVVDFPGAAMEKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRRAANGNTVD-GGYGDQRG
        MNANQ+ VVDF  AAM+ +   R+PKPPTRLQKQAPA L+LDQL+SVSM S   +  SK +LPLLSPLPSSPQPFPETEGNR  ANGN V+ GG GDQRG
Subjt:  MNANQAFVVDFPGAAMEKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRRAANGNTVD-GGYGDQRG

Query:  ICFAPPGGWQHPAVATTFADPSTLFTFFQSQCIVNSKTP
        I FA PGGWQHPAVA T+ADPSTLFTFFQS+CI+ S TP
Subjt:  ICFAPPGGWQHPAVATTFADPSTLFTFFQSQCIVNSKTP

KAG6605440.1 hypothetical protein SDJN03_02757, partial [Cucurbita argyrosperma subsp. sororia]1.9e-71100Show/hide
Query:  MNANQAFVVDFPGAAMEKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRRAANGNTVDGGYGDQRGI
        MNANQAFVVDFPGAAMEKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRRAANGNTVDGGYGDQRGI
Subjt:  MNANQAFVVDFPGAAMEKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRRAANGNTVDGGYGDQRGI

Query:  CFAPPGGWQHPAVATTFADPSTLFTFFQSQCIVNSKTP
        CFAPPGGWQHPAVATTFADPSTLFTFFQSQCIVNSKTP
Subjt:  CFAPPGGWQHPAVATTFADPSTLFTFFQSQCIVNSKTP

XP_011657141.1 uncharacterized protein LOC105435808 [Cucumis sativus]4.0e-5077.14Show/hide
Query:  MNANQAFVVDFPGAAMEKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRRAANGNTVD--GGYGDQR
        M+ANQ  VVDF   +ME E+K RLPKPPTRLQKQAPASLHLDQL+SVSMSS S DI SKAILPLLSPLP SPQP PE +GNR +ANGN VD  GG GDQR
Subjt:  MNANQAFVVDFPGAAMEKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRRAANGNTVD--GGYGDQR

Query:  GICFAPPGGWQHPAVATTFADPSTLFTFFQSQCIVNSKTP
        GI F  PGGWQHPAVA TF DPSTLFTFFQSQC+V+S TP
Subjt:  GICFAPPGGWQHPAVATTFADPSTLFTFFQSQCIVNSKTP

XP_023512816.1 uncharacterized protein LOC111777440 [Cucurbita pepo subsp. pepo]7.6e-4974.82Show/hide
Query:  MNANQAFVVDFPGAAMEKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRRAANGNTVD-GGYGDQRG
        MNANQ+ VVDF  AAM+ E   R+PKPPTRLQKQAPA L+LDQL+SVSMSS   +ISSK +LPLLSPLPSSPQPF ETEGNR   NGN  D GG GDQRG
Subjt:  MNANQAFVVDFPGAAMEKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRRAANGNTVD-GGYGDQRG

Query:  ICFAPPGGWQHPAVATTFADPSTLFTFFQSQCIVNSKTP
        I FA PGGWQHPAVA T+ADPSTLFTFFQS+CI+ S TP
Subjt:  ICFAPPGGWQHPAVATTFADPSTLFTFFQSQCIVNSKTP

XP_038902307.1 uncharacterized protein LOC120088941 [Benincasa hispida]2.5e-5279.29Show/hide
Query:  MNANQAFVVDFPGAAMEKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRRAANGNTVD--GGYGDQR
        MNANQ  V+DF   +ME EHK+RLPKPPTRLQKQAPASLHLDQL+SVSMSSGSAD  SKAILPLLSPLP SPQP PE +GNR +ANGN  D  GG GDQR
Subjt:  MNANQAFVVDFPGAAMEKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRRAANGNTVD--GGYGDQR

Query:  GICFAPPGGWQHPAVATTFADPSTLFTFFQSQCIVNSKTP
        GI FA PGGWQHPAVA TF DPSTLFTFFQSQCIV S TP
Subjt:  GICFAPPGGWQHPAVATTFADPSTLFTFFQSQCIVNSKTP

TrEMBL top hitse value%identityAlignment
A0A0A0KBQ7 Uncharacterized protein1.9e-5077.14Show/hide
Query:  MNANQAFVVDFPGAAMEKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRRAANGNTVD--GGYGDQR
        M+ANQ  VVDF   +ME E+K RLPKPPTRLQKQAPASLHLDQL+SVSMSS S DI SKAILPLLSPLP SPQP PE +GNR +ANGN VD  GG GDQR
Subjt:  MNANQAFVVDFPGAAMEKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRRAANGNTVD--GGYGDQR

Query:  GICFAPPGGWQHPAVATTFADPSTLFTFFQSQCIVNSKTP
        GI F  PGGWQHPAVA TF DPSTLFTFFQSQC+V+S TP
Subjt:  GICFAPPGGWQHPAVATTFADPSTLFTFFQSQCIVNSKTP

A0A2I4HTA9 uncharacterized protein LOC1089904952.4e-1649.57Show/hide
Query:  EKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRRAANGNTVDGGYGDQRGICFAPPGGWQHPAVATT
        +KE K+++ KPPTRLQKQAPASL LD++            +SKAI P LSPL  SPQP PET   R   +G+  +   G +R     P GGWQHPAV   
Subjt:  EKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRRAANGNTVDGGYGDQRGICFAPPGGWQHPAVATT

Query:  FADPSTLFTFFQSQCIV
        F +P  LFT FQSQC++
Subjt:  FADPSTLFTFFQSQCIV

A0A5A7V856 Uncharacterized protein6.1e-4478.4Show/hide
Query:  MEKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRRAANGNTVD--GGYGDQRGICFAPPGGWQHPAV
        ME E K RLPKPPTRLQKQAPASLHLDQL+SVSMSS S D  SKAILPLLSPLP SPQP PE +GNR +A GN V+  GG GDQRGI F  PGGWQHPAV
Subjt:  MEKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRRAANGNTVD--GGYGDQRGICFAPPGGWQHPAV

Query:  ATTFADPSTLFTFFQSQCIVNSKTP
        A TF DPSTLFTFFQSQCIV+S TP
Subjt:  ATTFADPSTLFTFFQSQCIVNSKTP

A0A6J1D5B7 uncharacterized protein LOC1110170714.7e-2872.38Show/hide
Query:  MNANQAFVVDFPGAAMEKEH--KSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNR----RAANGNTVDGGY
        MNANQ+ V+DF  A+MEKEH  KSR+PKPPTRLQKQAPASLHLDQ++S SM+ G A+ SSKAILPLLSPLP SPQP+PETE N      AAN N VDGG 
Subjt:  MNANQAFVVDFPGAAMEKEH--KSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNR----RAANGNTVDGGY

Query:  GDQRG
        GDQRG
Subjt:  GDQRG

A0A6P3ZH11 uncharacterized protein LOC1074110181.7e-1756.25Show/hide
Query:  KPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRR---AANGNTVDGGYGDQRGICF-APPGGWQHPAVATTFADPS
        KPPTRLQK+APASL LDQ+ + S ++ S + +SKAI PLLSPL  SPQP PE    RR   AA+ + V+    D+R      P  GWQHPAV TTF DPS
Subjt:  KPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRR---AANGNTVDGGYGDQRGICF-APPGGWQHPAVATTFADPS

Query:  TLFTFFQSQCIV
        +LF FFQSQC++
Subjt:  TLFTFFQSQCIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07473.1 unknown protein1.9e-0548.15Show/hide
Query:  KSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQP
        KS  P+ PTRLQKQAP +LHL  +        S+D+     +PLLSPL  SP P
Subjt:  KSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCAAATCAAGCTTTCGTGGTTGATTTTCCCGGAGCAGCAATGGAGAAAGAACATAAATCCAGATTGCCTAAACCACCGACCAGGTTACAGAAGCAGGCGCCGGC
GAGTCTTCATCTCGATCAACTAACGAGTGTCTCGATGTCTTCTGGTAGTGCTGATATTTCTTCGAAGGCGATTCTTCCTCTGCTATCGCCGCTCCCTTCATCGCCACAGC
CTTTTCCTGAAACTGAGGGAAATAGAAGAGCAGCAAACGGAAATACCGTAGACGGCGGCTATGGCGATCAAAGAGGTATATGTTTTGCACCTCCTGGTGGCTGGCAACAT
CCAGCGGTGGCGACGACATTCGCCGATCCATCTACTCTGTTTACGTTCTTTCAATCGCAGTGCATCGTAAACAGTAAGACGCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGCAAATCAAGCTTTCGTGGTTGATTTTCCCGGAGCAGCAATGGAGAAAGAACATAAATCCAGATTGCCTAAACCACCGACCAGGTTACAGAAGCAGGCGCCGGC
GAGTCTTCATCTCGATCAACTAACGAGTGTCTCGATGTCTTCTGGTAGTGCTGATATTTCTTCGAAGGCGATTCTTCCTCTGCTATCGCCGCTCCCTTCATCGCCACAGC
CTTTTCCTGAAACTGAGGGAAATAGAAGAGCAGCAAACGGAAATACCGTAGACGGCGGCTATGGCGATCAAAGAGGTATATGTTTTGCACCTCCTGGTGGCTGGCAACAT
CCAGCGGTGGCGACGACATTCGCCGATCCATCTACTCTGTTTACGTTCTTTCAATCGCAGTGCATCGTAAACAGTAAGACGCCGTGA
Protein sequenceShow/hide protein sequence
MNANQAFVVDFPGAAMEKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRRAANGNTVDGGYGDQRGICFAPPGGWQH
PAVATTFADPSTLFTFFQSQCIVNSKTP