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Carg26605 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26605
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionhistone-lysine N-methyltransferase ATXR6-like
Genome locationCarg_Chr15:6933845..6934602
RNA-Seq ExpressionCarg26605
SyntenyCarg26605
Gene Ontology termsGO:0032259 - methylation (biological process)
GO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0003712 - transcription coregulator activity (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0042393 - histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001965 - Zinc finger, PHD-type
IPR011011 - Zinc finger, FYVE/PHD-type
IPR019786 - Zinc finger, PHD-type, conserved site
IPR019787 - Zinc finger, PHD-finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579312.1 Histone-lysine N-methyltransferase ATXR6, partial [Cucurbita argyrosperma subsp. sororia]3.2e-5799.07Show/hide
Query:  MMQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV
        MMQKRRTLALKPSSRHDFA DHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV
Subjt:  MMQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV

Query:  DSQMDLNQ
        DSQMDLNQ
Subjt:  DSQMDLNQ

KAG7016812.1 Histone-lysine N-methyltransferase ATXR6, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-71100Show/hide
Query:  DFSFSQSESISPSAKMMQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPL
        DFSFSQSESISPSAKMMQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPL
Subjt:  DFSFSQSESISPSAKMMQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPL

Query:  VQTKIVDFFRIQRPVDSQMDLNQGRKVLPLEI
        VQTKIVDFFRIQRPVDSQMDLNQGRKVLPLEI
Subjt:  VQTKIVDFFRIQRPVDSQMDLNQGRKVLPLEI

XP_022922129.1 histone-lysine N-methyltransferase ATXR6-like [Cucurbita moschata]8.0e-5696.3Show/hide
Query:  MMQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV
        MMQKRRTLALKPSSRHDFA DHEEYDD+SCQKCGSG+SPAELLLCDKCDRGYHLFCL PILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV
Subjt:  MMQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV

Query:  DSQMDLNQ
        DSQMDLNQ
Subjt:  DSQMDLNQ

XP_022973019.1 histone-lysine N-methyltransferase ATXR6-like [Cucurbita maxima]2.1e-5697.22Show/hide
Query:  MMQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV
        MMQKRRTLALKPSSRHDFA DHEEYDD+SCQKCGSGDSPAELLLCDKCDRGYHLFCL PILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV
Subjt:  MMQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV

Query:  DSQMDLNQ
        DSQMDLNQ
Subjt:  DSQMDLNQ

XP_023521519.1 histone-lysine N-methyltransferase ATXR6-like [Cucurbita pepo subsp. pepo]1.0e-5596.3Show/hide
Query:  MMQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV
        MMQKRRTLALKPSSRHDFA DHEEYDD+SCQKCGSGDSPAELLLCDKCDRGYHLFCL PILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV
Subjt:  MMQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV

Query:  DSQMDLNQ
        DSQ DLNQ
Subjt:  DSQMDLNQ

TrEMBL top hitse value%identityAlignment
A0A5D3C3I0 Histone-lysine N-methyltransferase ATXR61.8e-4582.86Show/hide
Query:  MMQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV
        M+ KRRTLA KPSS H F  DH++YDDI CQKCGSGDSPA+LLLCDKCDRGYHLFCL PIL SVPKGSWFC TCSNHKKL+SFPLVQTKIVDFFRIQRP 
Subjt:  MMQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV

Query:  DSQMD
        DS+ D
Subjt:  DSQMD

A0A6J1C8I4 histone-lysine N-methyltransferase ATXR65.6e-4781.65Show/hide
Query:  MMQKRRTLALKPS--SRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQR
        M++KRRTLA KP+  +RHDF +D ++YDD+SCQKCGSGDSPA+LLLCDKCD GYHLFCL PILVSVPKGSWFCPTCSNHKKL+SFPLVQTKIVDFFRIQR
Subjt:  MMQKRRTLALKPS--SRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQR

Query:  PVDSQMDLN
        P DSQ DL+
Subjt:  PVDSQMDLN

A0A6J1E2H6 histone-lysine N-methyltransferase ATXR6-like3.9e-5696.3Show/hide
Query:  MMQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV
        MMQKRRTLALKPSSRHDFA DHEEYDD+SCQKCGSG+SPAELLLCDKCDRGYHLFCL PILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV
Subjt:  MMQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV

Query:  DSQMDLNQ
        DSQMDLNQ
Subjt:  DSQMDLNQ

A0A6J1H2I8 histone-lysine N-methyltransferase ATXR6-like5.6e-4784.76Show/hide
Query:  MQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPVD
        M KRRTLA KP++  DFA D +EYDD+SCQKC SGDSPAELLLCDKCDRGYHLFCL PIL SVPKGSWFCPTCSNHKKL+SFPLVQTKIVDFFRIQRP D
Subjt:  MQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPVD

Query:  SQMDL
        SQ DL
Subjt:  SQMDL

A0A6J1IDB0 histone-lysine N-methyltransferase ATXR6-like1.0e-5697.22Show/hide
Query:  MMQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV
        MMQKRRTLALKPSSRHDFA DHEEYDD+SCQKCGSGDSPAELLLCDKCDRGYHLFCL PILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV
Subjt:  MMQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQRPV

Query:  DSQMDLNQ
        DSQMDLNQ
Subjt:  DSQMDLNQ

SwissProt top hitse value%identityAlignment
B9RU15 Probable Histone-lysine N-methyltransferase ATXR51.7e-2153.16Show/hide
Query:  LDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQR
        ++  +Y D+SC +CGSG+   ELLLCDKCD+G+H+ C+ PI+V VP GSW CP CS  ++++   L Q KI+DFFRIQ+
Subjt:  LDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQR

Q8VZJ1 Histone-lysine N-methyltransferase ATXR51.6e-1942.99Show/hide
Query:  SISPSAKMMQKRRTLALK--PSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIV
        S SP  + M+    +  K  P    +   D + Y +++C+KCGSG+   ELLLCDKCDRG+H+ CL PI+V VP G+W C  CS+ + ++   L Q KI+
Subjt:  SISPSAKMMQKRRTLALK--PSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIV

Query:  DFFRIQR
         FFRI++
Subjt:  DFFRIQR

Q96T23 Remodeling and spacing factor 15.6e-1254.55Show/hide
Query:  DDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKL
        DD  C+KCG  + P  +LLCD CD GYH  CL P L+ +P G WFCP C  HK L
Subjt:  DDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKL

Q9FNE9 Histone-lysine N-methyltransferase ATXR69.2e-3159.62Show/hide
Query:  MQKRRTLALKPSS---RHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQR
        +++RRT A  P S   +H    D +   D  C++C SG  PA+LLLCDKCD+G+HLFCL PILVSVPKGSWFCP+CS H+  +SFPL+QTKI+DFFRI+R
Subjt:  MQKRRTLALKPSS---RHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQR

Query:  PVDS
          DS
Subjt:  PVDS

Q9QX66 Zinc finger protein neuro-d43.6e-1149.02Show/hide
Query:  SCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKK
        SC  CG+ ++  +LL CD CDRGYH++CL P +   P+GSW C  C  H K
Subjt:  SCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKK

Arabidopsis top hitse value%identityAlignment
AT1G77250.1 RING/FYVE/PHD-type zinc finger family protein3.0e-0842.22Show/hide
Query:  CQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTC
        C+ C +     +++LCD CD  YH++C+ P   SVP G WFC  C
Subjt:  CQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTC

AT3G01460.1 methyl-CPG-binding domain 91.3e-1138.81Show/hide
Query:  YDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIV
        +D+  C+ CG       +LLCD CD  YH +CL P L+ +P G+W+CP+C   K++    L   K+V
Subjt:  YDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIV

AT5G09790.1 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 51.6e-1742.22Show/hide
Query:  SISPSAKMMQKRRTLALK--PSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQ
        S SP  + M+    +  K  P    +   D + Y +++C+KCGSG+   ELLLCDKCDRG+H+ CL PI+V VP G+W C  CS+ + ++
Subjt:  SISPSAKMMQKRRTLALK--PSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQ

AT5G09790.2 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 51.2e-2042.99Show/hide
Query:  SISPSAKMMQKRRTLALK--PSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIV
        S SP  + M+    +  K  P    +   D + Y +++C+KCGSG+   ELLLCDKCDRG+H+ CL PI+V VP G+W C  CS+ + ++   L Q KI+
Subjt:  SISPSAKMMQKRRTLALK--PSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIV

Query:  DFFRIQR
         FFRI++
Subjt:  DFFRIQR

AT5G24330.1 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 66.6e-3259.62Show/hide
Query:  MQKRRTLALKPSS---RHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQR
        +++RRT A  P S   +H    D +   D  C++C SG  PA+LLLCDKCD+G+HLFCL PILVSVPKGSWFCP+CS H+  +SFPL+QTKI+DFFRI+R
Subjt:  MQKRRTLALKPSS---RHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFRIQR

Query:  PVDS
          DS
Subjt:  PVDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATTTCTCCTTCTCCCAATCTGAATCCATTTCCCCATCCGCCAAAATGATGCAGAAACGAAGAACTCTCGCTCTGAAACCCTCAAGCCGCCATGATTTTGCATTAGATCA
CGAGGAATACGACGACATTTCCTGTCAGAAATGCGGCTCCGGCGACTCTCCGGCTGAGCTTCTTCTCTGCGACAAATGTGATAGAGGGTATCATCTCTTTTGTCTTATGC
CCATCCTCGTTTCCGTCCCCAAGGGATCGTGGTTCTGCCCGACTTGCTCCAACCACAAGAAGCTCCAATCCTTCCCTCTTGTTCAAACTAAAATTGTTGATTTTTTCCGC
ATCCAACGACCTGTTGACTCTCAAATGGACTTAAACCAAGGTAGAAAAGTCCTACCACTGGAGATTTGA
mRNA sequenceShow/hide mRNA sequence
GATTTCTCCTTCTCCCAATCTGAATCCATTTCCCCATCCGCCAAAATGATGCAGAAACGAAGAACTCTCGCTCTGAAACCCTCAAGCCGCCATGATTTTGCATTAGATCA
CGAGGAATACGACGACATTTCCTGTCAGAAATGCGGCTCCGGCGACTCTCCGGCTGAGCTTCTTCTCTGCGACAAATGTGATAGAGGGTATCATCTCTTTTGTCTTATGC
CCATCCTCGTTTCCGTCCCCAAGGGATCGTGGTTCTGCCCGACTTGCTCCAACCACAAGAAGCTCCAATCCTTCCCTCTTGTTCAAACTAAAATTGTTGATTTTTTCCGC
ATCCAACGACCTGTTGACTCTCAAATGGACTTAAACCAAGGTAGAAAAGTCCTACCACTGGAGATTTGA
Protein sequenceShow/hide protein sequence
DFSFSQSESISPSAKMMQKRRTLALKPSSRHDFALDHEEYDDISCQKCGSGDSPAELLLCDKCDRGYHLFCLMPILVSVPKGSWFCPTCSNHKKLQSFPLVQTKIVDFFR
IQRPVDSQMDLNQGRKVLPLEI