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Carg26608 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26608
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein mitochondrial
Genome locationCarg_Chr15:6949995..6950586
RNA-Seq ExpressionCarg26608
SyntenyCarg26608
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605795.1 hypothetical protein SDJN03_03112, partial [Cucurbita argyrosperma subsp. sororia]3.8e-4292.86Show/hide
Query:  SKAGKNESAIAMENQST-CLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVANLPV
        SKAG N+SAIAMENQS+ CLSYEKLNGVATW+GTSVASAFFASLE CSCINLSTSDDHEDPDEAHDRPLMYCTSTSSS+IRSFEPLPPPVNDVANLPV
Subjt:  SKAGKNESAIAMENQST-CLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVANLPV
KAG7016815.1 hypothetical protein SDJN02_21926, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-48100Show/hide
Query:  MERSKAGKNESAIAMENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVANLPV
        MERSKAGKNESAIAMENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVANLPV
Subjt:  MERSKAGKNESAIAMENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVANLPV
KAG7035759.1 hypothetical protein SDJN02_02557, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-4292.86Show/hide
Query:  SKAGKNESAIAMENQST-CLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVANLPV
        SKAG N+SAIAMENQS+ CLSYEKLNGVATW+GTSVASAFFASLE CSCINLSTSDDHEDPDEAHDRPLMYCTSTSSS+IRSFEPLPPPVNDVANLPV
Subjt:  SKAGKNESAIAMENQST-CLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVANLPV
XP_011654597.1 uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus]3.2e-4187.38Show/hide
Query:  RSKAG-----KNESAIAMENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVAN
        RSKAG     K +S I MENQSTCLSYEKLNG+ATWVGTSVASAFFASLE CSCINLSTSDDHEDP+EAHDRPLMYCTSTSSS+IRSFEPLPPPVNDVAN
Subjt:  RSKAG-----KNESAIAMENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVAN

Query:  LPV
        LPV
Subjt:  LPV
XP_038875439.1 uncharacterized protein LOC120067894 [Benincasa hispida]2.5e-4192Show/hide
Query:  RSKAG-KNESAIAMENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSS-IIRSFEPLPPPVNDVANLPV
        RSKAG K +SAIAMENQSTCLSYEKLNGVA+WVGTSVASAFFASLE CSCINLSTSDDHEDP+EAHDRPLMYCTSTSSS +IRSFEPLPPPVNDVANLPV
Subjt:  RSKAG-KNESAIAMENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSS-IIRSFEPLPPPVNDVANLPV
TrEMBL top hitse value%identityAlignment
A0A0A0KLU3 Uncharacterized protein1.5e-3995.35Show/hide
Query:  MENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVANLPV
        MENQSTCLSYEKLNG+ATWVGTSVASAFFASLE CSCINLSTSDDHEDP+EAHDRPLMYCTSTSSS+IRSFEPLPPPVNDVANLPV
Subjt:  MENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVANLPV
A0A1S3AU63 uncharacterized protein LOC1034829842.3e-4087.38Show/hide
Query:  RSKAG----KNESAIAMENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSS-IIRSFEPLPPPVNDVAN
        RSKAG    K +S I MENQSTCLSYEKLNG+ATWVGTSVASAFFASLE CSCINLSTSDDHEDP+EAHDRPLMYCTSTSSS +IRSFEPLPPPVNDVAN
Subjt:  RSKAG----KNESAIAMENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSS-IIRSFEPLPPPVNDVAN

Query:  LPV
        LPV
Subjt:  LPV
A0A6J1E5Z9 uncharacterized protein LOC1114302725.9e-4198.84Show/hide
Query:  MENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVANLPV
        MENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSS+IRSFEPLPPPVNDVANLPV
Subjt:  MENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVANLPV
A0A6J1H0Y4 uncharacterized protein LOC1114594203.6e-3894.25Show/hide
Query:  MENQST-CLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVANLPV
        MENQS+ CLSYEKLNGVATW+GTSVASAFFASLE CSCINLSTSDDHEDPDEAHDRPLMYCTSTSSS+IRSFEPLPPPVNDVANLPV
Subjt:  MENQST-CLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVANLPV
A0A6J1ID63 uncharacterized protein LOC1114715011.0e-4098.84Show/hide
Query:  MENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVANLPV
        MENQSTCL+YEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVANLPV
Subjt:  MENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVANLPV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G10810.1 unknown protein3.0e-1358.73Show/hide
Query:  NESAIAMENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPL
        N +A    N ST  S EKL+  A+WV T+V SAFFASLE CSC+NLSTSDD ++ +E+H+RPL
Subjt:  NESAIAMENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPL
AT4G24026.1 unknown protein3.7e-1150.77Show/hide
Query:  NESAIAMENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTS--DDHEDPDEAHDRPL
        ++S     N ST  S EK++  A+W+  +V SAFF SLE C+C+NLSTS  DD +D DE+H RPL
Subjt:  NESAIAMENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTS--DDHEDPDEAHDRPL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGATCTAAGGCAGGCAAGAACGAATCCGCCATAGCCATGGAGAATCAGAGCACCTGCTTGTCCTATGAGAAGCTCAACGGAGTGGCGACCTGGGTAGGCACCAG
CGTCGCCTCCGCCTTCTTCGCCTCTCTCGAGAGTTGTTCCTGCATCAATCTCTCTACCTCCGACGACCACGAAGATCCCGACGAGGCTCACGATCGCCCTCTAATGTACT
GCACCTCCACTTCTTCCTCCATCATCCGCAGCTTTGAACCGCTTCCCCCGCCGGTCAACGACGTCGCCAATCTTCCTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGATCTAAGGCAGGCAAGAACGAATCCGCCATAGCCATGGAGAATCAGAGCACCTGCTTGTCCTATGAGAAGCTCAACGGAGTGGCGACCTGGGTAGGCACCAG
CGTCGCCTCCGCCTTCTTCGCCTCTCTCGAGAGTTGTTCCTGCATCAATCTCTCTACCTCCGACGACCACGAAGATCCCGACGAGGCTCACGATCGCCCTCTAATGTACT
GCACCTCCACTTCTTCCTCCATCATCCGCAGCTTTGAACCGCTTCCCCCGCCGGTCAACGACGTCGCCAATCTTCCTGTCTGA
Protein sequenceShow/hide protein sequence
MERSKAGKNESAIAMENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVANLPV