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Carg26662 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26662
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionStimulator of interferon protein
Genome locationCarg_Chr17:3117663..3119093
RNA-Seq ExpressionCarg26662
SyntenyCarg26662
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575224.1 hypothetical protein SDJN03_25863, partial [Cucurbita argyrosperma subsp. sororia]6.7e-71100Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPQTATEAAGILSRSVYSGDKIKHHHEDSAA
        MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPQTATEAAGILSRSVYSGDKIKHHHEDSAA
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPQTATEAAGILSRSVYSGDKIKHHHEDSAA

Query:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
        TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
Subjt:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

XP_022959271.1 uncharacterized protein LOC111460301 [Cucurbita moschata]2.1e-6997.71Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPQTATEAAGILSRSVYSGDKIKHHHEDSAA
        MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPP TATE AGI+SRSVYSGDKIKHHHEDSAA
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPQTATEAAGILSRSVYSGDKIKHHHEDSAA

Query:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
        TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
Subjt:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

XP_023006670.1 uncharacterized protein LOC111499326 [Cucurbita maxima]6.9e-6894.66Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPQTATEAAGILSRSVYSGDKIKHHHEDSAA
        MVDLQIVCCLCGDVGFPDKLFRC+KCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPP TATEAAGI+SRSVYSGDKIKHHHED+AA
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPQTATEAAGILSRSVYSGDKIKHHHEDSAA

Query:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
         VDKGKQGGAGS  SPRPTTRRYKLLKDVMC
Subjt:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

XP_023548605.1 uncharacterized protein LOC111807219 [Cucurbita pepo subsp. pepo]4.9e-6693.94Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPQTATEAAGILSRSVYSGDKIKHHHED-SA
        MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPP TAT+ AGI+SRSVYSGDKIKHHHED +A
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPQTATEAAGILSRSVYSGDKIKHHHED-SA

Query:  ATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
        ATVDKGKQG AGSV SPRPTTRRYKLLKDVMC
Subjt:  ATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

XP_038875571.1 uncharacterized protein LOC120067983 [Benincasa hispida]4.3e-6284.73Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPQTATEAAGILSRSVYSGDKIKHHHEDSAA
        MVDLQIVCC+CGD+GFPDKLFRC KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGR+SSRSHG+SSRRPP T T AAG++SRS YSG+KIKHHH+DSA 
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPQTATEAAGILSRSVYSGDKIKHHHEDSAA

Query:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
        T++KGK GGAGS  SPRPTTRRYKLLKDVMC
Subjt:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

TrEMBL top hitse value%identityAlignment
A0A0A0KFQ0 Uncharacterized protein2.7e-5781.82Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPQTATEAAGILSRSVYSGDK-IKHHHEDSA
        MVDLQIVCC+CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+SRSHG+SSRRPP T T A GI++RS YSGDK IKHHH DS 
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPQTATEAAGILSRSVYSGDK-IKHHHEDSA

Query:  ATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
           +KGK GGAGS +SPRPTTRRYKLLKDVMC
Subjt:  ATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

A0A1S3CSH8 uncharacterized protein LOC1035044131.6e-5481.34Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS-SSRSHG-TSSRRPPQTATEAAGILSRSVYSGDK-IKHHHED
        MVDLQIVCC+CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS SSRSHG +SSRRPP T T A GI+SRS YS DK IKHHH+D
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS-SSRSHG-TSSRRPPQTATEAAGILSRSVYSGDK-IKHHHED

Query:  SAATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
        S    +KGK GGAGS  SPRPTTRRYKLLKDVMC
Subjt:  SAATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

A0A6J1E160 uncharacterized protein LOC1110249973.7e-5176.12Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRR---PPQTATEAAGILSRSVYSGDKIKHHHED
        MVDLQIVCC+CGD+GFPDKLFRC KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHG+SS++   PP  A   AGI++RS Y+  KIK H ED
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRR---PPQTATEAAGILSRSVYSGDKIKHHHED

Query:  SAATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
          A  DKGK  G G V SPRPTTRRYKLLKDVMC
Subjt:  SAATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

A0A6J1H4E1 uncharacterized protein LOC1114603011.0e-6997.71Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPQTATEAAGILSRSVYSGDKIKHHHEDSAA
        MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPP TATE AGI+SRSVYSGDKIKHHHEDSAA
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPQTATEAAGILSRSVYSGDKIKHHHEDSAA

Query:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
        TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
Subjt:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

A0A6J1L0S8 uncharacterized protein LOC1114993263.3e-6894.66Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPQTATEAAGILSRSVYSGDKIKHHHEDSAA
        MVDLQIVCCLCGDVGFPDKLFRC+KCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPP TATEAAGI+SRSVYSGDKIKHHHED+AA
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPQTATEAAGILSRSVYSGDKIKHHHEDSAA

Query:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
         VDKGKQGGAGS  SPRPTTRRYKLLKDVMC
Subjt:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02070.1 unknown protein6.5e-3252.27Show/hide
Query:  LQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS---RSHGTSSRRPPQTATEAAGILSRSVYS-GDKIKHHHEDSA
        ++ VCC+CGDVGF DKLF C  C  RFQHSYCSNYY + AEP E+CDWC+ + R  S   R  G+SS++P  +        +RS YS G +IKH++ +  
Subjt:  LQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS---RSHGTSSRRPPQTATEAAGILSRSVYS-GDKIKHHHEDSA

Query:  ATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
          V KG  G  G V SP+  TRRYKLLKDVMC
Subjt:  ATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

AT3G60520.1 unknown protein3.2e-3149.29Show/hide
Query:  MVDLQ-IVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS-SSRSHGTSSRRPPQTATEAAGILSRSVYSGDKIKHH----
        MVDL+  VCC+CGDVGF DKLF C KC NRFQHSYCS+YY E A+PI++CDWCQCE +S +   HG +            G   RS  S     HH    
Subjt:  MVDLQ-IVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS-SSRSHGTSSRRPPQTATEAAGILSRSVYSGDKIKHH----

Query:  ---HEDSAATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
           ++ +++++      G   V SPRP TRRYKLLKDVMC
Subjt:  ---HEDSAATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATCTTCAGATCGTTTGCTGCTTGTGCGGCGACGTCGGCTTCCCTGACAAGCTCTTCCGCTGTATCAAGTGCTCCAACCGCTTCCAACACTCGTACTGCAGCAA
CTACTATAGCGAATCGGCGGAGCCAATTGAGGTGTGTGATTGGTGCCAGTGTGAAGGCCGGAGCTCCTCCAGATCACACGGAACCTCCTCCAGAAGACCGCCACAGACCG
CTACCGAAGCCGCCGGAATCCTGAGCCGCTCCGTTTACTCCGGCGACAAAATCAAACACCATCATGAAGATTCCGCCGCCACCGTCGACAAGGGCAAACAAGGCGGCGCC
GGCAGCGTCGCATCGCCGAGGCCCACCACGCGGAGGTATAAGCTTCTCAAGGACGTAATGTGCTGA
mRNA sequenceShow/hide mRNA sequence
GTTTTATATTTAAGTCATTCTCTTTGTTTTGTCTCTCATCATCTTCATCTTCTTCATCTTGGTTGTTCTGGTGTTGTTTGTTGTTGGATATAAATTTAAGAATGGTGGAT
CTTCAGATCGTTTGCTGCTTGTGCGGCGACGTCGGCTTCCCTGACAAGCTCTTCCGCTGTATCAAGTGCTCCAACCGCTTCCAACACTCGTACTGCAGCAACTACTATAG
CGAATCGGCGGAGCCAATTGAGGTGTGTGATTGGTGCCAGTGTGAAGGCCGGAGCTCCTCCAGATCACACGGAACCTCCTCCAGAAGACCGCCACAGACCGCTACCGAAG
CCGCCGGAATCCTGAGCCGCTCCGTTTACTCCGGCGACAAAATCAAACACCATCATGAAGATTCCGCCGCCACCGTCGACAAGGGCAAACAAGGCGGCGCCGGCAGCGTC
GCATCGCCGAGGCCCACCACGCGGAGGTATAAGCTTCTCAAGGACGTAATGTGCTGATAAAACGCAGCGTTTCGATATGCCCGAACAGGGTTGGTTTTATTTTCTCTTTT
TTTTTCTCAAATGTTAATTATTAATAAAATAACAATAATATTATTATTATGTAACAAAAAACGTATATATATATATATATATATA
Protein sequenceShow/hide protein sequence
MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPQTATEAAGILSRSVYSGDKIKHHHEDSAATVDKGKQGGA
GSVASPRPTTRRYKLLKDVMC