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Carg26672 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26672
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr17:3208035..3208259
RNA-Seq ExpressionCarg26672
SyntenyCarg26672
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY90175.1 hypothetical protein Acr_07g0003720 [Actinidia rufa]1.1e-0644.44Show/hide
Query:  MGNWIGKRRVIHPIEGHEGLRS-------CSRPLRIKVVMTRNQLKELMAMAD---LSLCDDLASLILQECCRGKFDARLL
        MGNW+GK++V+HP+ GHE LR+        +  +RIKV M+  +LKE MA  D   L+  + L  LILQEC RG++  R++
Subjt:  MGNWIGKRRVIHPIEGHEGLRS-------CSRPLRIKVVMTRNQLKELMAMAD---LSLCDDLASLILQECCRGKFDARLL

KAE7999293.1 hypothetical protein FH972_003740 [Carpinus fangiana]7.2e-0650.7Show/hide
Query:  MGNWIGKRRVIHPIEGHEGLRSCSRPLRIKVVMTRNQLKELMAMADLSLCD-DLASLILQECCRGKFDARL
        MGNW G+++V+HP+   E   SC   LR+KV MT+ QL+ELM   DLS  D +L  LILQEC  G+  AR+
Subjt:  MGNWIGKRRVIHPIEGHEGLRSCSRPLRIKVVMTRNQLKELMAMADLSLCD-DLASLILQECCRGKFDARL

KAF3963623.1 hypothetical protein CMV_012006 [Castanea mollissima]1.5e-0643.06Show/hide
Query:  MGNWIGKRRVIHPIEGHEGLRSCSRPLRIKVVMTRNQLKELMAMADLSLCD-DLASLILQECCRGKFDARLL
        MGN  G+++ +HP++  +G+R  S  LRI+V M++ +LKE+M   DL+  + DL  LI+QEC  G+ +AR L
Subjt:  MGNWIGKRRVIHPIEGHEGLRSCSRPLRIKVVMTRNQLKELMAMADLSLCD-DLASLILQECCRGKFDARLL

KAG7013803.1 hypothetical protein SDJN02_23970, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-33100Show/hide
Query:  MGNWIGKRRVIHPIEGHEGLRSCSRPLRIKVVMTRNQLKELMAMADLSLCDDLASLILQECCRGKFDARLLTSV
        MGNWIGKRRVIHPIEGHEGLRSCSRPLRIKVVMTRNQLKELMAMADLSLCDDLASLILQECCRGKFDARLLTSV
Subjt:  MGNWIGKRRVIHPIEGHEGLRSCSRPLRIKVVMTRNQLKELMAMADLSLCDDLASLILQECCRGKFDARLLTSV

XP_024197720.1 uncharacterized protein LOC112200945 [Rosa chinensis]2.3e-0742.86Show/hide
Query:  MGNWIGKRRVIHPIEGHEGLR--SCSRPLRIKVVMTRNQLKELMAMADLS----LCDDLASLILQECCRGKFDARLL
        MGNW+GK R +HP++  EGL     +  +RIK+ MT+ +LKELMA  D++      ++L  LIL+EC  G+  AR++
Subjt:  MGNWIGKRRVIHPIEGHEGLR--SCSRPLRIKVVMTRNQLKELMAMADLS----LCDDLASLILQECCRGKFDARLL

TrEMBL top hitse value%identityAlignment
A0A5E4FCA7 PREDICTED: POPTR_0014s10080g7.8e-0643.9Show/hide
Query:  MGNWIGKRRVIHPIEGHEGLR----SCSRPLRIKVVMTRNQLKELMAMADLSLCDD----LASLILQECCRGKFDARLLTSV
        MGNW+G+ + +HP E     R    S S  LRIKV MT  Q KELMA  D +   D    L  LIL+EC  G+  AR++ +V
Subjt:  MGNWIGKRRVIHPIEGHEGLR----SCSRPLRIKVVMTRNQLKELMAMADLSLCDD----LASLILQECCRGKFDARLLTSV

A0A5N5EYT1 Uncharacterized protein1.0e-0545.95Show/hide
Query:  MGNWIGKRRVIHPIE--GHEGLRSCSRPLRIKVVMTRNQLKELMAMADLSLC----DDLASLILQECCRGKFDA
        MGNWIG+ + +H  E  G  G R+ S  LR+KV MT  QLKELMA  D++      ++L  +ILQEC  G+  A
Subjt:  MGNWIGKRRVIHPIE--GHEGLRSCSRPLRIKVVMTRNQLKELMAMADLSLC----DDLASLILQECCRGKFDA

A0A5N6QMG2 Uncharacterized protein3.5e-0650.7Show/hide
Query:  MGNWIGKRRVIHPIEGHEGLRSCSRPLRIKVVMTRNQLKELMAMADLSLCD-DLASLILQECCRGKFDARL
        MGNW G+++V+HP+   E   SC   LR+KV MT+ QL+ELM   DLS  D +L  LILQEC  G+  AR+
Subjt:  MGNWIGKRRVIHPIEGHEGLRSCSRPLRIKVVMTRNQLKELMAMADLSLCD-DLASLILQECCRGKFDARL

A0A7J0EUJ9 Uncharacterized protein5.4e-0744.44Show/hide
Query:  MGNWIGKRRVIHPIEGHEGLRS-------CSRPLRIKVVMTRNQLKELMAMAD---LSLCDDLASLILQECCRGKFDARLL
        MGNW+GK++V+HP+ GHE LR+        +  +RIKV M+  +LKE MA  D   L+  + L  LILQEC RG++  R++
Subjt:  MGNWIGKRRVIHPIEGHEGLRS-------CSRPLRIKVVMTRNQLKELMAMAD---LSLCDDLASLILQECCRGKFDARLL

A0A7N2MCT3 Uncharacterized protein6.4e-0844.44Show/hide
Query:  MGNWIGKRRVIHPIEGHEGLRSCSRPLRIKVVMTRNQLKELMAMADLSLCD-DLASLILQECCRGKFDARLL
        MGN+ G+++ +HP++  +G+R  S  LRI+V M++ +LKE+MA  DL+  + DL  LI+QEC  G+ +AR L
Subjt:  MGNWIGKRRVIHPIEGHEGLRSCSRPLRIKVVMTRNQLKELMAMADLSLCD-DLASLILQECCRGKFDARLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G61930.1 unknown protein5.5e-0435.29Show/hide
Query:  MGNWIGKRRVIHPIEGHEGL-RSCSRP-------LRIKVVMTRNQLKELMAMADLSLCDD----LASLILQECCRGKFDARLLTS
        MGN++ +   +HP  G  G  R    P       +RIKV M R+QL+EL+ +A      D    +  LIL+EC  G+  A +L S
Subjt:  MGNWIGKRRVIHPIEGHEGL-RSCSRP-------LRIKVVMTRNQLKELMAMADLSLCDD----LASLILQECCRGKFDARLLTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATTGGATTGGAAAGAGAAGAGTGATACACCCAATTGAAGGCCACGAAGGACTGAGAAGCTGTTCGAGGCCTTTAAGGATCAAAGTAGTGATGACTCGAAACCA
GCTGAAGGAGCTCATGGCTATGGCTGACCTCAGTTTATGTGATGATTTAGCCAGCTTGATCTTGCAAGAATGCTGCCGAGGTAAATTCGATGCTCGTCTTCTCACTTCTG
TTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAATTGGATTGGAAAGAGAAGAGTGATACACCCAATTGAAGGCCACGAAGGACTGAGAAGCTGTTCGAGGCCTTTAAGGATCAAAGTAGTGATGACTCGAAACCA
GCTGAAGGAGCTCATGGCTATGGCTGACCTCAGTTTATGTGATGATTTAGCCAGCTTGATCTTGCAAGAATGCTGCCGAGGTAAATTCGATGCTCGTCTTCTCACTTCTG
TTTGA
Protein sequenceShow/hide protein sequence
MGNWIGKRRVIHPIEGHEGLRSCSRPLRIKVVMTRNQLKELMAMADLSLCDDLASLILQECCRGKFDARLLTSV