; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg26678 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26678
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionserine/arginine repetitive matrix protein 1
Genome locationCarg_Chr17:3351487..3356635
RNA-Seq ExpressionCarg26678
SyntenyCarg26678
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575245.1 hypothetical protein SDJN03_25884, partial [Cucurbita argyrosperma subsp. sororia]1.3e-6799.3Show/hide
Query:  PPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAAAVKEKNRTRQGKEQKKDGPPP
        PPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAAAVKEKNRTRQGKEQKKDGPPP
Subjt:  PPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAAAVKEKNRTRQGKEQKKDGPPP

Query:  TEGSGSDNSEVIRRVRPLRIKNDWGLRLTELEERLQEISETV
        TEGSGSDNSEVIRRVRPLRIKNDWGLRLTELE+RLQEISETV
Subjt:  TEGSGSDNSEVIRRVRPLRIKNDWGLRLTELEERLQEISETV

XP_022959476.1 uncharacterized protein LOC111460438 [Cucurbita moschata]2.8e-7896.93Show/hide
Query:  MWAAFSTSPSPSCCRLRLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA
        MW AFSTSPSPSCCRL LPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA
Subjt:  MWAAFSTSPSPSCCRLRLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA

Query:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEVIRRVRPLRIKNDWGLRLTELEERLQEISETV
        AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSE+ RRVRPLRIKNDWGLRLTELE+RLQEISETV
Subjt:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEVIRRVRPLRIKNDWGLRLTELEERLQEISETV

XP_023006674.1 uncharacterized protein LOC111499329 [Cucurbita maxima]1.5e-7493.87Show/hide
Query:  MWAAFSTSPSPSCCRLRLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA
        MWAAFSTSPSPSCCRL LPTRP PTPPVSAIYAKAQPP+TDADNATPNNS+SIKSFGHKILSAA STNPKSRSPIRKQESQLETA+ISGLDVLRALQKAA
Subjt:  MWAAFSTSPSPSCCRLRLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA

Query:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEVIRRVRPLRIKNDWGLRLTELEERLQEISETV
        AVKEKNRTRQ KEQKKDGPPPTEGSGSDNSE+ RRVRPLRIKNDWGLRLTELE+RLQEISETV
Subjt:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEVIRRVRPLRIKNDWGLRLTELEERLQEISETV

XP_023547620.1 uncharacterized protein LOC111806506 [Cucurbita pepo subsp. pepo]1.0e-7594.48Show/hide
Query:  MWAAFSTSPSPSCCRLRLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA
        MWAAFSTSPSPSCCRL LPTRPPPTPPVSAIYAKAQPPETDADNATPNNS+SIKSFGHKILSAANSTN KSRSPIRKQESQLETAQISGLDVLRALQKAA
Subjt:  MWAAFSTSPSPSCCRLRLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA

Query:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEVIRRVRPLRIKNDWGLRLTELEERLQEISETV
        AVKEKNR RQG+EQKKDGPPPTEGSGSDNSE+ RRVRPLRIKNDWGLRL ELE+RLQEISETV
Subjt:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEVIRRVRPLRIKNDWGLRLTELEERLQEISETV

XP_038906928.1 uncharacterized protein LOC120092795 [Benincasa hispida]8.9e-4869.64Show/hide
Query:  MWAAFSTSPSPSCCRLRLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSP-----IRKQESQLETAQISGLDVLRA
        MWAA ST P+PSC RL + TRP PTPPVSAIYA++QPP+TDA N TPN+S+SIKSFGHKILSA NS NPKS +P       KQE+Q E AQISG D+LRA
Subjt:  MWAAFSTSPSPSCCRLRLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSP-----IRKQESQLETAQISGLDVLRA

Query:  LQKAAAVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEVIRRVRPLRIKNDWGLRLTELEERLQEISETV
        LQKAAAVKEKNRTRQ K +KK+G P TEGS   +SE+  RVRPL+IK DWGLRL++LE+RLQE SE V
Subjt:  LQKAAAVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEVIRRVRPLRIKNDWGLRLTELEERLQEISETV

TrEMBL top hitse value%identityAlignment
A0A0A0KCJ8 Uncharacterized protein4.0e-3862.05Show/hide
Query:  MWAAFSTSPSPSCCRLRLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKS-RSPIRKQESQLETAQISGLDVLRALQKA
        MWAA STSP PSC RL + T  PPTPP+S   A +QP  TDA+N  PNNS+SIK FGHKILSA NS  PKS      K ES  E AQISG DVLRALQKA
Subjt:  MWAAFSTSPSPSCCRLRLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKS-RSPIRKQESQLETAQISGLDVLRALQKA

Query:  AAVKEKNRTRQGKEQKKDGPPPTEGSGSDN--SEVIRRVRPLRIKNDWGLRLTELEERLQEISETV
        AAVKEK RT+Q KE+KK      EG+ +++  SE+  RVRPL+I  DWGLRLT+LE+RL EIS+ V
Subjt:  AAVKEKNRTRQGKEQKKDGPPPTEGSGSDN--SEVIRRVRPLRIKNDWGLRLTELEERLQEISETV

A0A1S3CAW4 uncharacterized protein LOC1034987861.6e-3963.41Show/hide
Query:  MWAAFSTSPSPSCCRLRLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKS-RSPIRKQESQLETAQISGLDVLRALQKA
        MWAA STSPSPS  RL + T PPP  PVS  YAK+ PP+ DA+N  PNNS +IKSFGHKILSA NS  P+S      K ESQ E  QISG DVLRALQKA
Subjt:  MWAAFSTSPSPSCCRLRLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKS-RSPIRKQESQLETAQISGLDVLRALQKA

Query:  AAVKEKNRTRQGKEQKKDGPPPTEGSGSDN--SEVIRRVRPLRIKNDWGLRLTELEERLQEISE
        AAVKEKNRT+Q KE+KK      EG+ +++  SE+  RVRPL+IK DWGLRLT+LE+RL E+SE
Subjt:  AAVKEKNRTRQGKEQKKDGPPPTEGSGSDN--SEVIRRVRPLRIKNDWGLRLTELEERLQEISE

A0A5D3DMB8 Chaperone ClpB1.6e-3963.41Show/hide
Query:  MWAAFSTSPSPSCCRLRLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKS-RSPIRKQESQLETAQISGLDVLRALQKA
        MWAA STSPSPS  RL + T PPP  PVS  YAK+ PP+ DA+N  PNNS +IKSFGHKILSA NS  P+S      K ESQ E  QISG DVLRALQKA
Subjt:  MWAAFSTSPSPSCCRLRLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKS-RSPIRKQESQLETAQISGLDVLRALQKA

Query:  AAVKEKNRTRQGKEQKKDGPPPTEGSGSDN--SEVIRRVRPLRIKNDWGLRLTELEERLQEISE
        AAVKEKNRT+Q KE+KK      EG+ +++  SE+  RVRPL+IK DWGLRLT+LE+RL E+SE
Subjt:  AAVKEKNRTRQGKEQKKDGPPPTEGSGSDN--SEVIRRVRPLRIKNDWGLRLTELEERLQEISE

A0A6J1H4Y8 uncharacterized protein LOC1114604381.4e-7896.93Show/hide
Query:  MWAAFSTSPSPSCCRLRLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA
        MW AFSTSPSPSCCRL LPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA
Subjt:  MWAAFSTSPSPSCCRLRLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA

Query:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEVIRRVRPLRIKNDWGLRLTELEERLQEISETV
        AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSE+ RRVRPLRIKNDWGLRLTELE+RLQEISETV
Subjt:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEVIRRVRPLRIKNDWGLRLTELEERLQEISETV

A0A6J1L2U1 uncharacterized protein LOC1114993297.0e-7593.87Show/hide
Query:  MWAAFSTSPSPSCCRLRLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA
        MWAAFSTSPSPSCCRL LPTRP PTPPVSAIYAKAQPP+TDADNATPNNS+SIKSFGHKILSAA STNPKSRSPIRKQESQLETA+ISGLDVLRALQKAA
Subjt:  MWAAFSTSPSPSCCRLRLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA

Query:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEVIRRVRPLRIKNDWGLRLTELEERLQEISETV
        AVKEKNRTRQ KEQKKDGPPPTEGSGSDNSE+ RRVRPLRIKNDWGLRLTELE+RLQEISETV
Subjt:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEVIRRVRPLRIKNDWGLRLTELEERLQEISETV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46735.1 unknown protein5.6e-0834.38Show/hide
Query:  LPTRPPPTPPVSAIYAKAQPPETDADN---------ATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAAAVKEKNRT
        +P +    P V+   A +QPP  + D               S S+   G +IL     +NP  R PI K+       +ISG DVL A+Q+A A  ++ RT
Subjt:  LPTRPPPTPPVSAIYAKAQPPETDADN---------ATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAAAVKEKNRT

Query:  RQGKEQKKDGPPPTEGSGS------DNSEVIRRVRPLRIKNDWGLRLTELEERLQEISET
          GK++ K+     E S S      DN      V PLRIK+DWG RL E E+ L+E   T
Subjt:  RQGKEQKKDGPPPTEGSGS------DNSEVIRRVRPLRIKNDWGLRLTELEERLQEISET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGCTGCCTTCTCGACCTCACCGAGCCCGTCCTGCTGCCGCCTCCGGCTGCCAACCAGGCCGCCTCCGACGCCTCCGGTCTCCGCCATCTACGCGAAGGCTCAGCC
ACCCGAAACCGACGCCGATAACGCCACACCAAACAACAGTACCAGCATCAAAAGCTTCGGCCACAAAATTCTCTCGGCCGCGAACTCCACAAATCCCAAATCCCGCAGCC
CCATCCGAAAACAGGAATCGCAATTGGAGACTGCCCAAATTAGTGGGTTAGATGTTCTGAGGGCACTGCAGAAGGCGGCCGCCGTGAAGGAGAAAAACAGAACCCGACAA
GGGAAAGAACAGAAGAAAGACGGGCCGCCTCCCACCGAAGGGAGCGGCTCTGATAACTCTGAGGTGATCCGTAGAGTGAGGCCTCTGAGAATCAAGAACGATTGGGGCTT
GAGACTTACTGAGTTGGAGGAACGCCTTCAGGAGATCTCTGAGACGGTTTATTTTTATGGTTTTAATAATATTCCTAAACTTTCGTACGTCATTTTGTTTCAAAATAACC
CTTTTGCTAAGTTTTCAGCTAAAATGAAGGTGGAGAGAGATGCGGCACAGCGAGGACTCGCCGACCGAACTTGCTGGACAGGTCGGGATTTTGATGGGGACGGAGTGATG
GGGTTGTCTTCGCTTGTTTCCTTACATTATGGCCTCTCACCAAAGCCTGCAACTTCACCAGCCCCTTCAGTGCCCGTAGAGCCCTCCTCGCCTTCCAAAATTCAAAAGTT
AAGAAGGGTATCCATCCATTCACATTATGACAAATTTACAGAGTTGAGAGCTCACCAGATATCCTCTAAAGGCGGTTTGAATGAGAATGGCAGAGTAAGAACGGCGGTCC
AATGGAGAAGCAGGGGAAGGGCTGGTGAGGTGAAGAGGTTGTGCAGCCGGTCTGGCATGTTTGTGGTCAGTGGGGAGAGGCGGTTGGAGTGGAGGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGCTGCCTTCTCGACCTCACCGAGCCCGTCCTGCTGCCGCCTCCGGCTGCCAACCAGGCCGCCTCCGACGCCTCCGGTCTCCGCCATCTACGCGAAGGCTCAGCC
ACCCGAAACCGACGCCGATAACGCCACACCAAACAACAGTACCAGCATCAAAAGCTTCGGCCACAAAATTCTCTCGGCCGCGAACTCCACAAATCCCAAATCCCGCAGCC
CCATCCGAAAACAGGAATCGCAATTGGAGACTGCCCAAATTAGTGGGTTAGATGTTCTGAGGGCACTGCAGAAGGCGGCCGCCGTGAAGGAGAAAAACAGAACCCGACAA
GGGAAAGAACAGAAGAAAGACGGGCCGCCTCCCACCGAAGGGAGCGGCTCTGATAACTCTGAGGTGATCCGTAGAGTGAGGCCTCTGAGAATCAAGAACGATTGGGGCTT
GAGACTTACTGAGTTGGAGGAACGCCTTCAGGAGATCTCTGAGACGGTTTATTTTTATGGTTTTAATAATATTCCTAAACTTTCGTACGTCATTTTGTTTCAAAATAACC
CTTTTGCTAAGTTTTCAGCTAAAATGAAGGTGGAGAGAGATGCGGCACAGCGAGGACTCGCCGACCGAACTTGCTGGACAGGTCGGGATTTTGATGGGGACGGAGTGATG
GGGTTGTCTTCGCTTGTTTCCTTACATTATGGCCTCTCACCAAAGCCTGCAACTTCACCAGCCCCTTCAGTGCCCGTAGAGCCCTCCTCGCCTTCCAAAATTCAAAAGTT
AAGAAGGGTATCCATCCATTCACATTATGACAAATTTACAGAGTTGAGAGCTCACCAGATATCCTCTAAAGGCGGTTTGAATGAGAATGGCAGAGTAAGAACGGCGGTCC
AATGGAGAAGCAGGGGAAGGGCTGGTGAGGTGAAGAGGTTGTGCAGCCGGTCTGGCATGTTTGTGGTCAGTGGGGAGAGGCGGTTGGAGTGGAGGGAGTGACTCCGGCGG
CTGAGATGCTGGTTTTCTGAAAAGCCAGCGGCGTTTCTCCCGCCTCTGCAGAAAGTAGGATGAATGAGAAGGAGAAGAAGAAGAAGGAGATGAAAATTAAAGGGTACCTT
TTGTTCATCGTCTTTAGTGGGAGATCTGAAAGCCCTTTTGACGGCGGTGAGCCATGAGCTACCTCCTCCTTTCTTCCCCATTGAAAAGGAAAAAATGGGATGTTCAGAAG
AAAGATTTGGAAGCCATAGTTAAAGGGTCTACTGCTTCATCTGCTGCTGAAGAAGTTGAGATGCAGCCAATGAGAGTGACATAGAGACGTTAGAATTGATGTGGGAATCT
CAGACTCAACACAAAAACACACAAAATTTGAAAATATATTTTATGCAATCAGTAATTGAGCAATGAATGAGAGAGTAGTGAGTTATTATTATGATATATATTTTGATGCG
TTGGGTTTGTTGTGTTGCAGAGGGCATGGGGAAAGGGGTAACGAAGGTGTCAGAATCTGTGAGATAGATTCACCACAGATCTTTCATCCAACGG
Protein sequenceShow/hide protein sequence
MWAAFSTSPSPSCCRLRLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAAAVKEKNRTRQ
GKEQKKDGPPPTEGSGSDNSEVIRRVRPLRIKNDWGLRLTELEERLQEISETVYFYGFNNIPKLSYVILFQNNPFAKFSAKMKVERDAAQRGLADRTCWTGRDFDGDGVM
GLSSLVSLHYGLSPKPATSPAPSVPVEPSSPSKIQKLRRVSIHSHYDKFTELRAHQISSKGGLNENGRVRTAVQWRSRGRAGEVKRLCSRSGMFVVSGERRLEWRE