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Carg26688 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26688
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:385560..392808
RNA-Seq ExpressionCarg26688
SyntenyCarg26688
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585236.1 hypothetical protein SDJN03_17969, partial [Cucurbita argyrosperma subsp. sororia]3.2e-0768.85Show/hide
Query:  QDLSINAVIALGDPKDATTRVQHALNIEQYEIGRELRTKLTEF---SSNLATSLLFTVTLA
        QDLS+NAVIALGDPK       HALNIEQYEIGRELRTKLTEF   S N+  S LF   LA
Subjt:  QDLSINAVIALGDPKDATTRVQHALNIEQYEIGRELRTKLTEF---SSNLATSLLFTVTLA

KAG7020158.1 hypothetical protein SDJN02_16840, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-176100Show/hide
Query:  MASEPDTGRCANLLVVLRRDLQMVSESDTGRCANLPKGEGKSASKDAGPRRGWIVMSHRGSVPVKTLGPKGGEIWGSVPHRSEERKECHGGREYDVVRWG
        MASEPDTGRCANLLVVLRRDLQMVSESDTGRCANLPKGEGKSASKDAGPRRGWIVMSHRGSVPVKTLGPKGGEIWGSVPHRSEERKECHGGREYDVVRWG
Subjt:  MASEPDTGRCANLLVVLRRDLQMVSESDTGRCANLPKGEGKSASKDAGPRRGWIVMSHRGSVPVKTLGPKGGEIWGSVPHRSEERKECHGGREYDVVRWG

Query:  PSRRLELTFHLFCLQKSASHRFSGGGQDLSINAVIALGDPKDATTRVQHALNIEQYEIGRELRTKLTEFSSNLATSLLFTVTLASTWFTSAAKVAPQWNS
        PSRRLELTFHLFCLQKSASHRFSGGGQDLSINAVIALGDPKDATTRVQHALNIEQYEIGRELRTKLTEFSSNLATSLLFTVTLASTWFTSAAKVAPQWNS
Subjt:  PSRRLELTFHLFCLQKSASHRFSGGGQDLSINAVIALGDPKDATTRVQHALNIEQYEIGRELRTKLTEFSSNLATSLLFTVTLASTWFTSAAKVAPQWNS

Query:  QDSDDFDWWFAPISGLLCCIDFCRLVALSLLRGDFLNTEFSMWTLWVSLETFHFICDFFEAKSLSRLACFGVHCHMFSMVPLWIEFPFSEFTGCIADVVL
        QDSDDFDWWFAPISGLLCCIDFCRLVALSLLRGDFLNTEFSMWTLWVSLETFHFICDFFEAKSLSRLACFGVHCHMFSMVPLWIEFPFSEFTGCIADVVL
Subjt:  QDSDDFDWWFAPISGLLCCIDFCRLVALSLLRGDFLNTEFSMWTLWVSLETFHFICDFFEAKSLSRLACFGVHCHMFSMVPLWIEFPFSEFTGCIADVVL

Query:  SL
        SL
Subjt:  SL

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCAGAGCCAGACACCGGACGATGTGCCAACCTTCTCGTTGTTCTCCGAAGGGATTTACAAATGGTATCAGAGTCAGACACTGGACGATGTGCCAACCTTCCGAA
GGGGGAAGGAAAGAGTGCCAGCAAGGACGCTGGGCCCCGAAGGGGGTGGATTGTGATGTCCCATAGAGGCAGTGTGCCAGTAAAAACGTTGGGCCCTAAAGGGGGTGAAA
TTTGGGGGTCGGTCCCACATCGATCGGAGGAAAGGAAAGAGTGCCACGGAGGACGTGAATACGACGTCGTTAGATGGGGCCCTTCCCGCCGCTTGGAACTCACTTTTCAC
CTCTTCTGCTTGCAAAAAAGTGCTTCTCATCGCTTCTCCGGCGGCGGTCAGGATTTGTCAATAAACGCTGTGATTGCCTTGGGAGATCCTAAGGACGCGACAACACGAGT
ACAGCACGCGTTGAACATTGAGCAGTATGAAATTGGCCGGGAATTGAGAACGAAGCTAACTGAGTTCAGTTCTAATTTGGCTACATCACTTTTGTTCACAGTTACTCTTG
CTTCAACTTGGTTTACATCGGCAGCCAAAGTTGCACCGCAGTGGAATTCACAGGATTCTGATGATTTTGATTGGTGGTTTGCGCCAATATCTGGGTTGCTTTGTTGTATT
GACTTTTGTAGACTTGTTGCTTTGTCTTTACTGAGAGGAGACTTCTTAAACACTGAATTTTCCATGTGGACTTTGTGGGTATCTCTGGAGACCTTCCATTTTATCTGTGA
TTTCTTTGAGGCAAAAAGCTTGAGCAGATTGGCCTGCTTTGGAGTTCATTGTCACATGTTCTCTATGGTTCCTCTTTGGATTGAATTTCCATTTTCTGAGTTCACTGGTT
GTATTGCTGATGTTGTACTCTCGTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCAGAGCCAGACACCGGACGATGTGCCAACCTTCTCGTTGTTCTCCGAAGGGATTTACAAATGGTATCAGAGTCAGACACTGGACGATGTGCCAACCTTCCGAA
GGGGGAAGGAAAGAGTGCCAGCAAGGACGCTGGGCCCCGAAGGGGGTGGATTGTGATGTCCCATAGAGGCAGTGTGCCAGTAAAAACGTTGGGCCCTAAAGGGGGTGAAA
TTTGGGGGTCGGTCCCACATCGATCGGAGGAAAGGAAAGAGTGCCACGGAGGACGTGAATACGACGTCGTTAGATGGGGCCCTTCCCGCCGCTTGGAACTCACTTTTCAC
CTCTTCTGCTTGCAAAAAAGTGCTTCTCATCGCTTCTCCGGCGGCGGTCAGGATTTGTCAATAAACGCTGTGATTGCCTTGGGAGATCCTAAGGACGCGACAACACGAGT
ACAGCACGCGTTGAACATTGAGCAGTATGAAATTGGCCGGGAATTGAGAACGAAGCTAACTGAGTTCAGTTCTAATTTGGCTACATCACTTTTGTTCACAGTTACTCTTG
CTTCAACTTGGTTTACATCGGCAGCCAAAGTTGCACCGCAGTGGAATTCACAGGATTCTGATGATTTTGATTGGTGGTTTGCGCCAATATCTGGGTTGCTTTGTTGTATT
GACTTTTGTAGACTTGTTGCTTTGTCTTTACTGAGAGGAGACTTCTTAAACACTGAATTTTCCATGTGGACTTTGTGGGTATCTCTGGAGACCTTCCATTTTATCTGTGA
TTTCTTTGAGGCAAAAAGCTTGAGCAGATTGGCCTGCTTTGGAGTTCATTGTCACATGTTCTCTATGGTTCCTCTTTGGATTGAATTTCCATTTTCTGAGTTCACTGGTT
GTATTGCTGATGTTGTACTCTCGTTATGA
Protein sequenceShow/hide protein sequence
MASEPDTGRCANLLVVLRRDLQMVSESDTGRCANLPKGEGKSASKDAGPRRGWIVMSHRGSVPVKTLGPKGGEIWGSVPHRSEERKECHGGREYDVVRWGPSRRLELTFH
LFCLQKSASHRFSGGGQDLSINAVIALGDPKDATTRVQHALNIEQYEIGRELRTKLTEFSSNLATSLLFTVTLASTWFTSAAKVAPQWNSQDSDDFDWWFAPISGLLCCI
DFCRLVALSLLRGDFLNTEFSMWTLWVSLETFHFICDFFEAKSLSRLACFGVHCHMFSMVPLWIEFPFSEFTGCIADVVLSL