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Carg26702 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26702
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPLATZ transcription factor family protein
Genome locationCarg_Chr17:2965165..2966109
RNA-Seq ExpressionCarg26702
SyntenyCarg26702
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger
IPR006734 - PLATZ transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575216.1 Vesicle-associated protein 1-3, partial [Cucurbita argyrosperma subsp. sororia]1.7e-71100Show/hide
Query:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT
        MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT
Subjt:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT

Query:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK
        RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK
Subjt:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK

KAG7013781.1 hypothetical protein SDJN02_23948, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-71100Show/hide
Query:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT
        MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT
Subjt:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT

Query:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK
        RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK
Subjt:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK

XP_022959264.1 uncharacterized protein LOC111460295 [Cucurbita moschata]1.7e-71100Show/hide
Query:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT
        MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT
Subjt:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT

Query:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK
        RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK
Subjt:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK

XP_023006650.1 uncharacterized protein LOC111499311 [Cucurbita maxima]7.3e-7098.46Show/hide
Query:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT
        MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCA VQSYTTNSAKVVFL QRPQT
Subjt:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT

Query:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK
        RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK
Subjt:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK

XP_023548824.1 uncharacterized protein LOC111807359 [Cucurbita pepo subsp. pepo]8.7e-7199.23Show/hide
Query:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT
        MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFL QRPQT
Subjt:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT

Query:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK
        RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK
Subjt:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK

TrEMBL top hitse value%identityAlignment
A0A0A0KCM1 B box-type domain-containing protein3.7e-6795.38Show/hide
Query:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT
        M SLPIWLQALLT KFFNACV+HE AKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFL QRPQT
Subjt:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT

Query:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK
        RNFRGSSGNLCSTCDRSLQDPYLFCS+SCK
Subjt:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK

A0A1S3C8E3 uncharacterized protein LOC1034976633.7e-6795.38Show/hide
Query:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT
        M SLPIWLQALLT KFFNACV+HE AKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFL QRPQT
Subjt:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT

Query:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK
        RNFRGSSGNLCSTCDRSLQDPYLFCS+SCK
Subjt:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK

A0A6J1H7K0 uncharacterized protein LOC1114602958.4e-72100Show/hide
Query:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT
        MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT
Subjt:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT

Query:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK
        RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK
Subjt:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK

A0A6J1KHE0 uncharacterized protein LOC1114943931.2e-6593.08Show/hide
Query:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT
        M++LPIWLQALL+ KFFNACVLHE AKKNEKNIFCFDCSLGICPHCLSSH SHKLLQIRRYVYHDVIRLDDA KLIDCAFVQSYTTNSAKVVFL QRPQT
Subjt:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT

Query:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK
        RNFRGSSGNLCSTCDRSLQDPY FCSLSCK
Subjt:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK

A0A6J1L0Q7 uncharacterized protein LOC1114993113.5e-7098.46Show/hide
Query:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT
        MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCA VQSYTTNSAKVVFL QRPQT
Subjt:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT

Query:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK
        RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK
Subjt:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK

SwissProt top hitse value%identityAlignment
Q1G3Q4 Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 15.0e-4562.7Show/hide
Query:  PIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFR
        P WL AL   KFF  C  HE AKKNE+N+ C DC   +CPHC+ SH  H+LLQ+RRYVYHDV+RL+D  KLIDC+ VQ+YT NSAKVVF+ +RPQ R F+
Subjt:  PIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFR

Query:  GSSGNLCSTCDRSLQDPYLFCSLSCK
        G +GN C++CDRSLQ+PY+ CSL CK
Subjt:  GSSGNLCSTCDRSLQDPYLFCSLSCK

Arabidopsis top hitse value%identityAlignment
AT1G31040.1 PLATZ transcription factor family protein4.3e-4460Show/hide
Query:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT
        M + P WL+ L+   FF++C +HE  +K+EKN+FC  C L +CPHCL SH SH LLQ+RRYVYHDV+RL D  KLIDC++VQ YT N AKV+FLNQR Q+
Subjt:  MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQT

Query:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK
        R     S N+C TCDR LQ+P+ FCSLSCK
Subjt:  RNFRGSSGNLCSTCDRSLQDPYLFCSLSCK

AT1G32700.1 PLATZ transcription factor family protein5.5e-3151.97Show/hide
Query:  PIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLG-ICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNF
        P WL+ LL  KFF  C LH  + K+E N++C DC+ G +C  CLS H  H  +QIRR  YHDVIR+ +  K +D   VQ+Y  NSAKVVFLN+RPQ R  
Subjt:  PIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLG-ICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNF

Query:  RGSSGNLCSTCDRSLQDPYLFCSLSCK
        +G   N C  C RSL D + FCSL CK
Subjt:  RGSSGNLCSTCDRSLQDPYLFCSLSCK

AT2G01818.1 PLATZ transcription factor family protein1.2e-3046.27Show/hide
Query:  IWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLS----SHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTR
        +W++ LL  +FF  C+ H++ +KNEKN+FC DC++ IC HC +    SH  H+ LQI +YVY DVIRL +     DC+ +Q+Y  N  K + LN RPQ +
Subjt:  IWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLS----SHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTR

Query:  NFRGS----SGNLCSTCDRSLQD-PYLFCSLSCK
        + R S    +G  C TC R +QD P LFCS+SCK
Subjt:  NFRGS----SGNLCSTCDRSLQD-PYLFCSLSCK

AT2G12646.1 PLATZ transcription factor family protein3.5e-4662.7Show/hide
Query:  PIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFR
        P WL AL   KFF  C  HE AKKNE+N+ C DC   +CPHC+ SH  H+LLQ+RRYVYHDV+RL+D  KLIDC+ VQ+YT NSAKVVF+ +RPQ R F+
Subjt:  PIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFR

Query:  GSSGNLCSTCDRSLQDPYLFCSLSCK
        G +GN C++CDRSLQ+PY+ CSL CK
Subjt:  GSSGNLCSTCDRSLQDPYLFCSLSCK

AT3G60670.1 PLATZ transcription factor family protein3.3e-5271.43Show/hide
Query:  PIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFR
        P WL+ LL  KFFNAC+ HE  KKNEKNI C DC L ICPHCLSSH+SH+LLQIRRYVY DV+R++D +KL+DC+ +Q YTTNS+KVVF+N+RPQ+R FR
Subjt:  PIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFR

Query:  GSSGNLCSTCDRSLQDPYLFCSLSCK
        G SGN+C TCDRSLQ PYLFC LSCK
Subjt:  GSSGNLCSTCDRSLQDPYLFCSLSCK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTCTCTACCCATCTGGCTCCAAGCGCTCCTCACCCACAAGTTCTTCAACGCCTGTGTTCTTCACGAACACGCCAAAAAGAACGAAAAAAACATCTTCTGTTTCGA
CTGTTCTCTCGGCATTTGCCCTCACTGCCTCTCCTCCCATTCTTCCCACAAACTCCTCCAGATTAGGCGTTATGTGTACCACGATGTGATTCGATTGGATGATGCTACTA
AACTCATCGACTGCGCTTTTGTTCAATCTTACACTACGAATAGTGCGAAAGTGGTGTTTCTGAACCAAAGGCCACAGACCAGAAACTTCCGAGGCTCCTCCGGCAACCTC
TGCAGCACCTGCGATAGAAGCCTTCAAGATCCTTATCTCTTTTGCTCTCTTTCCTGCAAG
mRNA sequenceShow/hide mRNA sequence
ATGCACTCTCTACCCATCTGGCTCCAAGCGCTCCTCACCCACAAGTTCTTCAACGCCTGTGTTCTTCACGAACACGCCAAAAAGAACGAAAAAAACATCTTCTGTTTCGA
CTGTTCTCTCGGCATTTGCCCTCACTGCCTCTCCTCCCATTCTTCCCACAAACTCCTCCAGATTAGGCGTTATGTGTACCACGATGTGATTCGATTGGATGATGCTACTA
AACTCATCGACTGCGCTTTTGTTCAATCTTACACTACGAATAGTGCGAAAGTGGTGTTTCTGAACCAAAGGCCACAGACCAGAAACTTCCGAGGCTCCTCCGGCAACCTC
TGCAGCACCTGCGATAGAAGCCTTCAAGATCCTTATCTCTTTTGCTCTCTTTCCTGCAAG
Protein sequenceShow/hide protein sequence
MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNL
CSTCDRSLQDPYLFCSLSCK