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Carg26703 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26703
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionB box-type domain-containing protein
Genome locationCarg_Chr17:2965772..2966519
RNA-Seq ExpressionCarg26703
SyntenyCarg26703
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013782.1 hypothetical protein SDJN02_23949 [Cucurbita argyrosperma subsp. argyrosperma]2.3e-53100Show/hide
Query:  MKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEGGRSVVVSTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK
        MKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEGGRSVVVSTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK
Subjt:  MKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEGGRSVVVSTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK

Query:  GTPQRAPLY
        GTPQRAPLY
Subjt:  GTPQRAPLY

XP_011656872.1 uncharacterized protein LOC101214475 [Cucumis sativus]4.3e-3976.92Show/hide
Query:  MKTEGGVSRNLLECNF-----SAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEGGRSVVVSTATTEFVKKKRSSLT---AAYRAACRPACWPGTISETS
        +KT+GG+S++LLECNF       WDDGLMMTPDSVLE  GSN++SSGSDGGG EG    +VSTATTEFVKKKRSSLT   AAYRAACRP CWPGTISETS
Subjt:  MKTEGGVSRNLLECNF-----SAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEGGRSVVVSTATTEFVKKKRSSLT---AAYRAACRPACWPGTISETS

Query:  GSLLSRRKGTPQRAPLY
        GSL+SRRKGTPQRAPLY
Subjt:  GSLLSRRKGTPQRAPLY

XP_022959264.1 uncharacterized protein LOC111460295 [Cucurbita moschata]6.8e-5399.08Show/hide
Query:  MKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEGGRSVVVSTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK
        MKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEGGRSVV STATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK
Subjt:  MKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEGGRSVVVSTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK

Query:  GTPQRAPLY
        GTPQRAPLY
Subjt:  GTPQRAPLY

XP_023006650.1 uncharacterized protein LOC111499311 [Cucurbita maxima]1.2e-4994.55Show/hide
Query:  MKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGV-EGGRSVVVSTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRR
        MKTEGGVSRN+LECNFSAWDDGLMMTPDSVLE GGSNQTSSGSDG GV EGGRSVV STATT+FVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRR
Subjt:  MKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGV-EGGRSVVVSTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRR

Query:  KGTPQRAPLY
        KGTPQRAPLY
Subjt:  KGTPQRAPLY

XP_023548824.1 uncharacterized protein LOC111807359 [Cucurbita pepo subsp. pepo]1.7e-5198.18Show/hide
Query:  MKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGV-EGGRSVVVSTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRR
        MKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGV EGGRSVV STATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRR
Subjt:  MKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGV-EGGRSVVVSTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRR

Query:  KGTPQRAPLY
        KGTPQRAPLY
Subjt:  KGTPQRAPLY

TrEMBL top hitse value%identityAlignment
A0A0A0KCM1 B box-type domain-containing protein2.1e-3976.92Show/hide
Query:  MKTEGGVSRNLLECNF-----SAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEGGRSVVVSTATTEFVKKKRSSLT---AAYRAACRPACWPGTISETS
        +KT+GG+S++LLECNF       WDDGLMMTPDSVLE  GSN++SSGSDGGG EG    +VSTATTEFVKKKRSSLT   AAYRAACRP CWPGTISETS
Subjt:  MKTEGGVSRNLLECNF-----SAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEGGRSVVVSTATTEFVKKKRSSLT---AAYRAACRPACWPGTISETS

Query:  GSLLSRRKGTPQRAPLY
        GSL+SRRKGTPQRAPLY
Subjt:  GSLLSRRKGTPQRAPLY

A0A1S3C8E3 uncharacterized protein LOC1034976634.6e-3978.26Show/hide
Query:  MKTEGGVSRNLLECNF-----SAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEGGRSVVVSTATTEFVKKKRSSLT-AAYRAACRPACWPGTISETSGS
        +KT+GG+S+ LLECNF       WDDGLMMTPDSVLE  GS +TSSGSDGGG EG    +VSTATTEFVKKKRSSLT AAYRAACRP CWPGTISETSGS
Subjt:  MKTEGGVSRNLLECNF-----SAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEGGRSVVVSTATTEFVKKKRSSLT-AAYRAACRPACWPGTISETSGS

Query:  LLSRRKGTPQRAPLY
        L+SRRKGTPQRAPLY
Subjt:  LLSRRKGTPQRAPLY

A0A6J1H7K0 uncharacterized protein LOC1114602953.3e-5399.08Show/hide
Query:  MKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEGGRSVVVSTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK
        MKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEGGRSVV STATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK
Subjt:  MKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEGGRSVVVSTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK

Query:  GTPQRAPLY
        GTPQRAPLY
Subjt:  GTPQRAPLY

A0A6J1HHL3 uncharacterized protein LOC1114643904.2e-3267.52Show/hide
Query:  MKTEGGVSRNLLECNF-----SAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEGGRSVVVSTATTEFVKKKRSSLT---AAYRAACRPACWPGTISETS
        +K +GGVSR+LLECNF       WDDG++MTPDSVLE  GS +TSS SDGG V   R+ + STATT+FVKKKRSSLT   AAYR  CRPAC   T+SETS
Subjt:  MKTEGGVSRNLLECNF-----SAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEGGRSVVVSTATTEFVKKKRSSLT---AAYRAACRPACWPGTISETS

Query:  GSLLSRRKGTPQRAPLY
        GSL+SRRK TPQRAPLY
Subjt:  GSLLSRRKGTPQRAPLY

A0A6J1L0Q7 uncharacterized protein LOC1114993115.8e-5094.55Show/hide
Query:  MKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGV-EGGRSVVVSTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRR
        MKTEGGVSRN+LECNFSAWDDGLMMTPDSVLE GGSNQTSSGSDG GV EGGRSVV STATT+FVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRR
Subjt:  MKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGV-EGGRSVVVSTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRR

Query:  KGTPQRAPLY
        KGTPQRAPLY
Subjt:  KGTPQRAPLY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G60670.1 PLATZ transcription factor family protein2.9e-0942.99Show/hide
Query:  GVSRNLLECN-FSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEG--GRSVVVSTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGT
        G+S  L  CN     D+    TP S LE  GSN+TSS S G   E       +  TATTE V+KKRSSL+   R          T  E   + L+RRK  
Subjt:  GVSRNLLECN-FSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEG--GRSVVVSTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGT

Query:  PQRAPLY
        PQRAPLY
Subjt:  PQRAPLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACGGAAGGTGGCGTTTCGAGGAATCTCTTGGAGTGTAATTTCTCGGCATGGGACGACGGGCTCATGATGACACCAGACTCTGTTCTCGAACTCGGTGGTTCGAA
CCAAACCTCCTCCGGTTCCGACGGCGGTGGTGTAGAAGGAGGGAGGAGTGTAGTAGTGTCGACGGCAACGACGGAGTTCGTGAAGAAAAAGAGAAGTAGCTTGACGGCGG
CGTATAGGGCAGCGTGCCGGCCGGCTTGCTGGCCAGGGACGATTTCCGAGACGTCTGGGAGTTTATTGAGCCGGAGAAAAGGTACCCCACAGCGGGCCCCACTCTATTGA
mRNA sequenceShow/hide mRNA sequence
AACTTTGTTGTTCATCTTAATTGGATTTGCAGAAACAGAGTAATTTTGTTGTTCATCTTAATTGGGTTTGCAGAAACAGAGTAACTTTGTTGTTCATCTTAATTGGGTTT
GAAGAAACAGAGTAATTTTGTTGTTCATCTTAATTGGGTTTGCAGAAACAGAGTAATTTTGTTGTTTTTGGTTGGTTGATTTAGTCTTACACTACGAATAGTGCGAAAGT
GGTGTTTCTGAACCAAAGGCCACAGACCAGAAACTTCCGAGGCTCCTCCGGCAACCTCTGCAGCACCTGCGATAGAAGCCTTCAAGATCCTTATCTCTTTTGCTCTCTTT
CCTGCAAGATTGATTTTCTAATGAAGACGGAAGGTGGCGTTTCGAGGAATCTCTTGGAGTGTAATTTCTCGGCATGGGACGACGGGCTCATGATGACACCAGACTCTGTT
CTCGAACTCGGTGGTTCGAACCAAACCTCCTCCGGTTCCGACGGCGGTGGTGTAGAAGGAGGGAGGAGTGTAGTAGTGTCGACGGCAACGACGGAGTTCGTGAAGAAAAA
GAGAAGTAGCTTGACGGCGGCGTATAGGGCAGCGTGCCGGCCGGCTTGCTGGCCAGGGACGATTTCCGAGACGTCTGGGAGTTTATTGAGCCGGAGAAAAGGTACCCCAC
AGCGGGCCCCACTCTATTGA
Protein sequenceShow/hide protein sequence
MKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEGGRSVVVSTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGTPQRAPLY