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Carg26711 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26711
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionagamous-like MADS-box protein AGL62
Genome locationCarg_Chr17:3066071..3066396
RNA-Seq ExpressionCarg26711
SyntenyCarg26711
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574839.1 Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2568.22Show/hide
Query:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPND-------------------------KPAENFVPVTEFNRDFADLVL
        KTLGRQKIEIKKLEKKSSKQVTFSKRRA LFKK GELSVLCGAEVAII FSPND                         KPAE++VPV EFNRDFADLVL
Subjt:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPND-------------------------KPAENFVPVTEFNRDFADLVL

Query:  KFEVAKK
        +FE  KK
Subjt:  KFEVAKK

KAG7013413.1 Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2568.22Show/hide
Query:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPND-------------------------KPAENFVPVTEFNRDFADLVL
        KTLGRQKIEIKKLEKKSSKQVTFSKRRA LFKK GELSVLCGAEVAII FSPND                         KPAE++VPV EFNRDFADLVL
Subjt:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPND-------------------------KPAENFVPVTEFNRDFADLVL

Query:  KFEVAKK
        +FE  KK
Subjt:  KFEVAKK

KAG7013790.1 Agamous-like MADS-box protein AGL61, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-35100Show/hide
Query:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDKPAENFVPVTEFNRDFADLVLKFEVAKK
        KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDKPAENFVPVTEFNRDFADLVLKFEVAKK
Subjt:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDKPAENFVPVTEFNRDFADLVLKFEVAKK

XP_023006252.1 agamous-like MADS-box protein AGL62 [Cucurbita maxima]1.6e-2568.22Show/hide
Query:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPND-------------------------KPAENFVPVTEFNRDFADLVL
        KTLGRQKIEIKKLEKKSSKQVTFSKRRA LFKK GELSVLCGAEVAII FSPND                         KPAE++VPV EFNRDFADLVL
Subjt:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPND-------------------------KPAENFVPVTEFNRDFADLVL

Query:  KFEVAKK
        +FE  KK
Subjt:  KFEVAKK

XP_023549141.1 agamous-like MADS-box protein AGL62 [Cucurbita pepo subsp. pepo]1.6e-2568.22Show/hide
Query:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPND-------------------------KPAENFVPVTEFNRDFADLVL
        KTLGRQKIEIKKLEKKSSKQVTFSKRRA LFKK GELSVLCGAEVAII FSPND                         KPAE++VPV EFNRDFADLVL
Subjt:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPND-------------------------KPAENFVPVTEFNRDFADLVL

Query:  KFEVAKK
        +FE  KK
Subjt:  KFEVAKK

TrEMBL top hitse value%identityAlignment
A0A0A0LE01 MADS-box domain-containing protein1.1e-2465.42Show/hide
Query:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPND-------------------------KPAENFVPVTEFNRDFADLVL
        KTLGRQKIEIKKLEKKSSKQVTFSKRRA LFKK GELSVLCGAEVAII FSPND                         KPAE+++PV EFNRDFAD  L
Subjt:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPND-------------------------KPAENFVPVTEFNRDFADLVL

Query:  KFEVAKK
        +FE  KK
Subjt:  KFEVAKK

A0A1S3CRI8 agamous-like MADS-box protein AGL628.3e-2565.42Show/hide
Query:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPND-------------------------KPAENFVPVTEFNRDFADLVL
        KTLGRQKIEIKKLEKKSSKQVTFSKRRA LFKK GELSVLCGAEVAII FSPND                         KPAE+++PV EFNRDFAD  L
Subjt:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPND-------------------------KPAENFVPVTEFNRDFADLVL

Query:  KFEVAKK
        +FE  KK
Subjt:  KFEVAKK

A0A5D3D807 Agamous-like MADS-box protein AGL628.3e-2565.42Show/hide
Query:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPND-------------------------KPAENFVPVTEFNRDFADLVL
        KTLGRQKIEIKKLEKKSSKQVTFSKRRA LFKK GELSVLCGAEVAII FSPND                         KPAE+++PV EFNRDFAD  L
Subjt:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPND-------------------------KPAENFVPVTEFNRDFADLVL

Query:  KFEVAKK
        +FE  KK
Subjt:  KFEVAKK

A0A6J1H4M6 agamous-like MADS-box protein AGL627.5e-2668.22Show/hide
Query:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPND-------------------------KPAENFVPVTEFNRDFADLVL
        KTLGRQKIEIKKLEKKSSKQVTFSKRRA LFKK GELSVLCGAEVAII FSPND                         KPAE++VPV EFNRDFADLVL
Subjt:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPND-------------------------KPAENFVPVTEFNRDFADLVL

Query:  KFEVAKK
        +FE  KK
Subjt:  KFEVAKK

A0A6J1KVC9 agamous-like MADS-box protein AGL627.5e-2668.22Show/hide
Query:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPND-------------------------KPAENFVPVTEFNRDFADLVL
        KTLGRQKIEIKKLEKKSSKQVTFSKRRA LFKK GELSVLCGAEVAII FSPND                         KPAE++VPV EFNRDFADLVL
Subjt:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPND-------------------------KPAENFVPVTEFNRDFADLVL

Query:  KFEVAKK
        +FE  KK
Subjt:  KFEVAKK

SwissProt top hitse value%identityAlignment
O80807 Agamous-like MADS-box protein AGL231.6e-0960Show/hide
Query:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDK
        KTLGR+K+EI K+ K+S+ QVTFSKR+A LFKK  E   LC A++A+I FSP  K
Subjt:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDK

Q38847 Agamous-like MADS-box protein AGL151.2e-0964.15Show/hide
Query:  LGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDK
        +GR KIEIK++E  +S+QVTFSKRR+ L KK  ELSVLC AEVA+I FS + K
Subjt:  LGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDK

Q39295 Agamous-like MADS-box protein AGL155.6e-1066.04Show/hide
Query:  LGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDK
        +GR KIEIK++E  +S+QVTFSKRRA L KK  ELSVLC AEVA+I FS + K
Subjt:  LGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDK

Q4PSU4 Agamous-like MADS-box protein AGL613.9e-1162.5Show/hide
Query:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDKP
        +++GRQKI + K++K+S +QVTFSKRRA LFKK  EL  LCGAE+ II FSP  KP
Subjt:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDKP

Q9FKK2 Agamous-like MADS-box protein AGL621.9e-1063.64Show/hide
Query:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDK
        K+ GRQKIE+ K++ +S+ QVTFSKRR+ LFKK  EL  LCGAEVAI+ FSP  K
Subjt:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDK

Arabidopsis top hitse value%identityAlignment
AT1G17310.1 MADS-box transcription factor family protein1.4e-1164.81Show/hide
Query:  TLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDK
        T GRQKIEIKK+E+++ +QVTFSKRR  LFKK  ELSVL GA++A+I FS  D+
Subjt:  TLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDK

AT1G72350.1 MADS-box transcription factor family protein4.0e-1162.96Show/hide
Query:  TLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDK
        T GRQKIEIK++  ++ +QVTFSKRR+ LFKK  ELSVLCGA++ II FS  D+
Subjt:  TLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDK

AT2G24840.1 AGAMOUS-like 612.7e-1262.5Show/hide
Query:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDKP
        +++GRQKI + K++K+S +QVTFSKRRA LFKK  EL  LCGAE+ II FSP  KP
Subjt:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDKP

AT3G66656.1 AGAMOUS-like 913.0e-1148Show/hide
Query:  LGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDKP----AENFVPVTE-FNRDFAD
        +GR+KI+++K++  ++KQVTFSKRR  LFKK  EL+ LC AEV I+ FSP +KP      NF  + E F  +F +
Subjt:  LGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDKP----AENFVPVTE-FNRDFAD

AT5G60440.1 AGAMOUS-like 621.4e-1163.64Show/hide
Query:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDK
        K+ GRQKIE+ K++ +S+ QVTFSKRR+ LFKK  EL  LCGAEVAI+ FSP  K
Subjt:  KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAACTCTTGGCCGTCAAAAGATCGAAATCAAGAAGTTAGAGAAGAAGAGCAGCAAACAAGTGACCTTTTCGAAGCGTCGTGCCCGACTTTTCAAGAAGGTCGGTGAGCT
TTCTGTGCTTTGCGGAGCAGAGGTTGCCATCATTGGCTTCTCTCCGAACGATAAGCCGGCGGAGAATTTCGTTCCTGTAACTGAGTTTAATCGCGATTTCGCCGATTTAG
TGTTGAAGTTCGAAGTGGCGAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
AAAACTCTTGGCCGTCAAAAGATCGAAATCAAGAAGTTAGAGAAGAAGAGCAGCAAACAAGTGACCTTTTCGAAGCGTCGTGCCCGACTTTTCAAGAAGGTCGGTGAGCT
TTCTGTGCTTTGCGGAGCAGAGGTTGCCATCATTGGCTTCTCTCCGAACGATAAGCCGGCGGAGAATTTCGTTCCTGTAACTGAGTTTAATCGCGATTTCGCCGATTTAG
TGTTGAAGTTCGAAGTGGCGAAGAAGTGA
Protein sequenceShow/hide protein sequence
KTLGRQKIEIKKLEKKSSKQVTFSKRRARLFKKVGELSVLCGAEVAIIGFSPNDKPAENFVPVTEFNRDFADLVLKFEVAKK