CuGenDBv2

Gene ID	Carg26712
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	PAP_fibrillin domain-containing protein
Genome location	Carg_Chr17:3066859..3069475
RNA-Seq Expression	Carg26712
Synteny	Carg26712
Gene Ontology terms	NA
InterPro domains	IPR006843 - Plastid lipid-associated protein/fibrillin conserved domain IPR039633 - Plastid-lipid-associated protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6575222.1 putative plastid-lipid-associated protein 11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

9.9e-91

85.51

Show/hide

Query:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE
        MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASL+RNSVTTDDSLSATWRLLWTTE
Subjt:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQH
        KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG    ++  +   +   ++ 
Subjt:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQH

Query:  HCLFCSSKESWTWE
          L    +  +TW+
Subjt:  HCLFCSSKESWTWE

KAG7013791.1 putative plastid-lipid-associated protein 11, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.3e-119

100

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Query:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE
        MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE
Subjt:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQH
        KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQH
Subjt:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQH

Query:  HCLFCSSKESWTWENGSSILFTAC
        HCLFCSSKESWTWENGSSILFTAC
Subjt:  HCLFCSSKESWTWENGSSILFTAC

XP_022974289.1 probable plastid-lipid-associated protein 11, chloroplastic isoform X1 [Cucurbita maxima]

3.3e-110

95.98

Show/hide

Query:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE
        MAKSLSLPSRPFNSPSSSIGT  SQ PKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLA NSVTTDDSLSATWRLLWTTE
Subjt:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQH
        KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSS QH
Subjt:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQH

Query:  HCLFCSSKESWTWENGSSILFTAC
        HCLF SSKES T EN SSILFTAC
Subjt:  HCLFCSSKESWTWENGSSILFTAC

XP_023006655.1 probable plastid-lipid-associated protein 11, chloroplastic isoform X1 [Cucurbita maxima]

2.1e-109

95.54

Show/hide

Query:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE
        MAKSLSLPSRPFNSPSSSIGT  SQ PKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLA NSVTTDDSLSATWRLLWTTE
Subjt:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQH
        KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSS QH
Subjt:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQH

Query:  HCLFCSSKESWTWENGSSILFTAC
        HCLF SSKES T EN SSI FTAC
Subjt:  HCLFCSSKESWTWENGSSILFTAC

XP_023547718.1 probable plastid-lipid-associated protein 11, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]

2.2e-90

95.72

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Query:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE
        MAKSLSLPSRPFNSPSSSIGT  SQLPKISCSSISIQSQSP+DQLLALISDQERGLKTQKSPQKLASIVKSIDALASL RNSVTTDDSLSATWRLLWTTE
Subjt:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLF
        KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGC +  F
Subjt:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLF

TrEMBL top hits

e value

%identity

Alignment

A0A6J1H3N2 probable plastid-lipid-associated protein 11, chloroplastic isoform X1

1.4e-90

85.51

Show/hide

Query:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE
        MAKSLSLPSRPFNSPSSSIGTR SQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE
Subjt:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQH
        KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG    ++  +   +   ++ 
Subjt:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQH

Query:  HCLFCSSKESWTWE
          L    +  +TW+
Subjt:  HCLFCSSKESWTWE

A0A6J1H509 probable plastid-lipid-associated protein 11, chloroplastic isoform X2

1.1e-90

99.45

Show/hide

Query:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE
        MAKSLSLPSRPFNSPSSSIGTR SQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE
Subjt:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG
        KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG
Subjt:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG

A0A6J1IDK6 probable plastid-lipid-associated protein 11, chloroplastic isoform X2

5.3e-90

88.78

Show/hide

Query:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE
        MAKSLSLPSRPFNSPSSSIGT  SQ PKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLA NSVTTDDSLSATWRLLWTTE
Subjt:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLF--QKNQYYLPSSL
        KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGC +  F   KN  ++ + +
Subjt:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLF--QKNQYYLPSSL

Query:  QHHCL
        + + L
Subjt:  QHHCL

A0A6J1IH64 probable plastid-lipid-associated protein 11, chloroplastic isoform X1

1.6e-110

95.98

Show/hide

Query:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE
        MAKSLSLPSRPFNSPSSSIGT  SQ PKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLA NSVTTDDSLSATWRLLWTTE
Subjt:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQH
        KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSS QH
Subjt:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQH

Query:  HCLFCSSKESWTWENGSSILFTAC
        HCLF SSKES T EN SSILFTAC
Subjt:  HCLFCSSKESWTWENGSSILFTAC

A0A6J1L0R0 probable plastid-lipid-associated protein 11, chloroplastic isoform X1

1.0e-109

95.54

Show/hide

Query:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE
        MAKSLSLPSRPFNSPSSSIGT  SQ PKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLA NSVTTDDSLSATWRLLWTTE
Subjt:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQH
        KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSS QH
Subjt:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQH

Query:  HCLFCSSKESWTWENGSSILFTAC
        HCLF SSKES T EN SSI FTAC
Subjt:  HCLFCSSKESWTWENGSSILFTAC

SwissProt top hits

e value

%identity

Alignment

O81304 Probable plastid-lipid-associated protein 11, chloroplastic

1.3e-56

56.81

Show/hide

Query:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE
        +A SLS  S P         TRR+   + SCS  +  +Q  K +LL LIS+++RGL+TQK P+K   IV +I+++  + R+S+TTDDSLSATWRLLWTTE
Subjt:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQH
        KEQLFIIEKA LFGT AGDVLQVIDV K+ LNNVITFPPDGVFFVRS I++AS QRVNFRF SAVLRGKNWE+PLPPFG+G    ++   +  +   ++ 
Subjt:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQH

Query:  HCLFCS-SKESWT
          L    +  +WT
Subjt:  HCLFCS-SKESWT

Arabidopsis top hits

e value

%identity

Alignment

AT4G00030.1 Plastid-lipid associated protein PAP / fibrillin family protein

9.0e-58

56.81

Show/hide

Query:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE
        +A SLS  S P         TRR+   + SCS  +  +Q  K +LL LIS+++RGL+TQK P+K   IV +I+++  + R+S+TTDDSLSATWRLLWTTE
Subjt:  MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQH
        KEQLFIIEKA LFGT AGDVLQVIDV K+ LNNVITFPPDGVFFVRS I++AS QRVNFRF SAVLRGKNWE+PLPPFG+G    ++   +  +   ++ 
Subjt:  KEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQH

Query:  HCLFCS-SKESWT
          L    +  +WT
Subjt:  HCLFCS-SKESWT

Sequences

Show/hide sequences

CDS sequence

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mRNA sequence

Show/hide mRNA sequence

ATGGCCAAATCCCTCTCTCTTCCATCGCGTCCCTTCAATTCCCCTTCTTCTTCCATTGGAACCCGTCGCTCTCAACTCCCCAAAATCTCTTGTTCTTCCATATCCATTCA
ATCTCAATCACCCAAAGACCAACTCCTCGCCCTAATCTCCGACCAAGAAAGAGGTCTCAAGACCCAGAAAAGCCCTCAGAAACTTGCTTCAATTGTGAAATCAATCGACG
CCTTGGCGTCTCTTGCTCGAAATTCTGTCACAACGGACGATTCACTTTCTGCGACATGGCGTCTTCTATGGACCACTGAGAAAGAGCAGCTGTTCATCATTGAGAAGGCT
CACTTGTTTGGTACTCAAGCTGGGGATGTTTTGCAGGTGATTGATGTCAAGAAAAAGAGTCTTAATAATGTCATCACTTTTCCTCCAGATGGGGTTTTCTTCGTTCGATC
CAGCATTGAAGTTGCTTCCTCTCAGAGAGTGAATTTTAGATTTACAAGTGCTGTTCTGCGAGGAAAAAACTGGGAAATTCCTTTGCCACCATTCGGACAGGGCTGCTTGT
TGAGGTTATTCCAAAAGAACCAATACTACTTACCAAGCAGCCTACAGCACCATTGCCTCTTTTGTTCCTCCAAAGAATCATGGACATGGGAAAACGGGAGTTCGATTCTA
TTTACGGCATGTTGATAGATGTCTTGTCCTCTAATGCCTCCAGTTAGAATAAGAGAGCTCAACGACTTCTACTTCTATTACAGTGAATGGTTCGAGACGGTATACCTCGA
TGATGATATCCGGGTTGTAAAAGATATCCGAGATGATTATTTGATCGTTGAACGTGCTCCCTACACTTGGAAAGAATGAAAAGCTAGATCACTGGTTTTCACTGCTGCTA
TAGAAACACGATGCAGTAGATTGTATTAGTGTTAGTCTTCTAAATTGATCCCCAGTACGTCTATCCTTCTGGATTCTGTGTCATTATTCAACACTCAGTGCTGCTGCGCT
CACTGTTTAGGTATTATTGTTGTAAACCTTGATTACCATTATTTGGGCTAACAATTGATAATGGGGTAATATTCATGTCAAAAGTTAAAAGGTTCAAATGTTCGTATCCA
AGCTTCATATTTACGGGTTGATAAATATATGTAGGCACAGGTATCCATTCATCTGTAGTCCATCCAAATGTTTGAAGTCCATCCAAATGTTTTTAGTATAATATCCGTGA
GATTCCACATCTGTGAGGGGAAGCTCGAAAGGAAAATTCTGAAGAGGATTATCTACTAGCGGTGAGTTTGGATCGTAACAAATGGTGGGCTTGGGTTATTACAATATTAT
TTCATAAAAATATCTATATCGGTATGTGAAATCTTGATTTTTTTT

Protein sequence

Show/hide protein sequence

MAKSLSLPSRPFNSPSSSIGTRRSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTEKEQLFIIEKA
HLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGCLLRLFQKNQYYLPSSLQHHCLFCSSKESWTWENGSSIL
FTAC

Carg26712 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome