| GenBank top hits | e value | %identity | Alignment |
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| XP_004150106.1 small nuclear ribonucleoprotein SmD1b [Cucumis sativus] | 3.0e-51 | 96.49 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNP+TMDHLSVRGN+IRYYILPDSLNLETLLVEET RVKPKKPTAG+PLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| XP_012473940.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Gossypium raimondii] | 3.9e-51 | 96.49 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLK VKLTLKGKNP+TMDHLSVRGN+IRYYILPDSLNLETLLVEET RVKPKKPTAGKPLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| XP_022931093.1 small nuclear ribonucleoprotein SmD1b [Cucurbita moschata] | 1.3e-51 | 97.37 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNP+TMDHLSVRGN+IRYYILPDSLNLETLLVEET RVKPKKPTAGKPLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| XP_022947377.1 small nuclear ribonucleoprotein SmD1b-like [Cucurbita moschata] | 9.3e-53 | 100 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| XP_022963993.1 small nuclear ribonucleoprotein SmD1b-like [Cucurbita moschata] | 2.3e-51 | 96.49 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNP+TMDHLSVRGN+IRYYILPDSLNLETLLVEET RVKPKKPTAGKP+GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1EXE6 Small nuclear ribonucleoprotein Sm D1 | 6.5e-52 | 97.37 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNP+TMDHLSVRGN+IRYYILPDSLNLETLLVEET RVKPKKPTAGKPLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| A0A6J1G6A2 Small nuclear ribonucleoprotein Sm D1 | 4.5e-53 | 100 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| A0A6J1HJI3 Small nuclear ribonucleoprotein Sm D1 | 1.1e-51 | 96.49 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNP+TMDHLSVRGN+IRYYILPDSLNLETLLVEET RVKPKKPTAGKP+GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| A0A6J1I3K7 Small nuclear ribonucleoprotein Sm D1 | 4.5e-53 | 100 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| A0A6J1K070 Small nuclear ribonucleoprotein Sm D1 | 6.5e-52 | 97.37 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNP+TMDHLSVRGN+IRYYILPDSLNLETLLVEET RVKPKKPTAGKPLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P62314 Small nuclear ribonucleoprotein Sm D1 | 2.6e-37 | 72.81 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
MKLVRFLMKL++ETV+IELKNGT VHGTITGVD+SMNTHLKAVK+TLK + P+ ++ LS+RGN+IRY+ILPDSL L+TLLV+ +VK KK A GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| Q3ZC10 Small nuclear ribonucleoprotein Sm D1 | 2.6e-37 | 72.81 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
MKLVRFLMKL++ETV+IELKNGT VHGTITGVD+SMNTHLKAVK+TLK + P+ ++ LS+RGN+IRY+ILPDSL L+TLLV+ +VK KK A GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| Q4R5F6 Small nuclear ribonucleoprotein Sm D1 | 2.6e-37 | 72.81 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
MKLVRFLMKL++ETV+IELKNGT VHGTITGVD+SMNTHLKAVK+TLK + P+ ++ LS+RGN+IRY+ILPDSL L+TLLV+ +VK KK A GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| Q9SSF1 Small nuclear ribonucleoprotein SmD1a | 2.6e-50 | 88.6 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVD+SMNTHLK VK++LKGKNP+T+DHLS+RGN+IRYYILPDSLNLETLLVE+T RVKPKKP AGK +GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| Q9SY09 Small nuclear ribonucleoprotein SmD1b | 5.3e-51 | 91.23 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGK-PLG
MKLVRFLMKLNNETVSIELKNGT+VHGTITGVD+SMNTHLKAVKLTLKGKNP+T+DHLSVRGN+IRYYILPDSLNLETLLVE+T R+KPKKPTAGK P G
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGK-PLG
Query: RGRGRGRGRGRGRG
RGRGRGRGRGRGRG
Subjt: RGRGRGRGRGRGRG
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT3G07590.1 Small nuclear ribonucleoprotein family protein | 1.9e-51 | 88.6 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVD+SMNTHLK VK++LKGKNP+T+DHLS+RGN+IRYYILPDSLNLETLLVE+T RVKPKKP AGK +GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| AT3G07590.2 Small nuclear ribonucleoprotein family protein | 1.9e-51 | 88.6 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVD+SMNTHLK VK++LKGKNP+T+DHLS+RGN+IRYYILPDSLNLETLLVE+T RVKPKKP AGK +GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 3.8e-52 | 91.23 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGK-PLG
MKLVRFLMKLNNETVSIELKNGT+VHGTITGVD+SMNTHLKAVKLTLKGKNP+T+DHLSVRGN+IRYYILPDSLNLETLLVE+T R+KPKKPTAGK P G
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGK-PLG
Query: RGRGRGRGRGRGRG
RGRGRGRGRGRGRG
Subjt: RGRGRGRGRGRGRG
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| AT4G02840.2 Small nuclear ribonucleoprotein family protein | 1.0e-49 | 83.87 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTIT----------GVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPK
MKLVRFLMKLNNETVSIELKNGT+VHGTIT GVD+SMNTHLKAVKLTLKGKNP+T+DHLSVRGN+IRYYILPDSLNLETLLVE+T R+KPK
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTIT----------GVDISMNTHLKAVKLTLKGKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPK
Query: KPTAGK-PLGRGRGRGRGRGRGRG
KPTAGK P GRGRGRGRGRGRGRG
Subjt: KPTAGK-PLGRGRGRGRGRGRGRG
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| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 1.3e-07 | 40.82 | Show/hide |
Query: IELKNGTVVHGTITGVDISMNTHLKAVKLTLK-GKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGRGRGRGRGRGRGRG
+ELKNG +G + D MN HL+ V T K G M +RGN+I+Y +PD + + EE TR K P G+ GRG G RGRGRG
Subjt: IELKNGTVVHGTITGVDISMNTHLKAVKLTLK-GKNPITMDHLSVRGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGRGRGRGRGRGRGRG
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