; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg26737 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26737
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRNA-binding KH domain-containing protein PEPPER-like
Genome locationCarg_Chr17:3604626..3612521
RNA-Seq ExpressionCarg26737
SyntenyCarg26737
Gene Ontology termsGO:0010468 - regulation of gene expression (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR004088 - K Homology domain, type 1
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575260.1 Flowering locus K-likey domain protein, partial [Cucurbita argyrosperma subsp. sororia]1.5e-133100Show/hide
Query:  MPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARY
        MPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARY
Subjt:  MPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARY

Query:  EERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHE
        EERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHE
Subjt:  EERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHE

Query:  SDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS
        SDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS
Subjt:  SDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS

KAG7013815.1 Flowering locus K-likey domain protein [Cucurbita argyrosperma subsp. argyrosperma]1.3e-145100Show/hide
Query:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAP
        TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAP
Subjt:  TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAP

Query:  NQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTSGKPILQLIM
        NQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTSGKPILQLIM
Subjt:  NQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTSGKPILQLIM

XP_022959402.1 flowering locus K homology domain-like [Cucurbita moschata]2.2e-140100Show/hide
Query:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAP
        TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAP
Subjt:  TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAP

Query:  NQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS
        NQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS
Subjt:  NQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS

XP_023006600.1 RNA-binding KH domain-containing protein PEPPER-like [Cucurbita maxima]2.1e-13899.25Show/hide
Query:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSMPLPG LLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDG-TSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILA
        TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDG TSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILA
Subjt:  TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDG-TSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILA

Query:  PNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS
        PNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS
Subjt:  PNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS

XP_023549102.1 flowering locus K homology domain-like [Cucurbita pepo subsp. pepo]1.2e-13899.25Show/hide
Query:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSM LPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAP
        TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAP
Subjt:  TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAP

Query:  NQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS
        NQLPLCASAH SDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS
Subjt:  NQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS

TrEMBL top hitse value%identityAlignment
A0A0A0KCF8 Uncharacterized protein4.8e-13394.76Show/hide
Query:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVS+ GHTVTGKRRREDDLIVSNS+A D+SAPKRQAKAHDVLFRI+VPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAP
        TIKIADAVARYEERVIIISSKD ENSVTDAEKALQ IAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGA+ITILAP
Subjt:  TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAP

Query:  NQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS
        NQLPLCASAHESDRVVQISGD+ AVLKALEEIGNQLRVNPPRQVISVSPTYNYN MHPPQSY+DPTS
Subjt:  NQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS

A0A1S3CB11 RNA-binding KH domain-containing protein PEPPER-like3.7e-13395.13Show/hide
Query:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVS+ GHTVTGKRRREDDLIVSNS+A DVSAPKRQAKAHDVLFRI+VPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAP
        TIKIADAVARYEERVIIISSKD ENSVTDAEKALQ IAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGA+ITILAP
Subjt:  TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAP

Query:  NQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS
        NQLPLCASAHESDRVVQISGD+ AVLKALEEIGNQLRVNPPRQVISVSPTYNYN MHPPQSY+DPTS
Subjt:  NQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS

A0A5A7T8H9 RNA-binding KH domain-containing protein PEPPER-like3.7e-13395.13Show/hide
Query:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVS+ GHTVTGKRRREDDLIVSNS+A DVSAPKRQAKAHDVLFRI+VPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAP
        TIKIADAVARYEERVIIISSKD ENSVTDAEKALQ IAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGA+ITILAP
Subjt:  TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAP

Query:  NQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS
        NQLPLCASAHESDRVVQISGD+ AVLKALEEIGNQLRVNPPRQVISVSPTYNYN MHPPQSY+DPTS
Subjt:  NQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS

A0A6J1H4F3 flowering locus K homology domain-like1.1e-140100Show/hide
Query:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAP
        TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAP
Subjt:  TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAP

Query:  NQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS
        NQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS
Subjt:  NQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS

A0A6J1L0K4 RNA-binding KH domain-containing protein PEPPER-like1.0e-13899.25Show/hide
Query:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSMPLPG LLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDG-TSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILA
        TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDG TSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILA
Subjt:  TIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDG-TSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILA

Query:  PNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS
        PNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS
Subjt:  PNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTS

SwissProt top hitse value%identityAlignment
F4KDN0 KH domain-containing protein HEN41.3e-1332.75Show/hide
Query:  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVI-IISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRL
        DV+F+I+  ++  G VIG  G  ++ +  ET A I + + +   EER+I + +S++ E   + A+KA+  I + + +     I    +  G  ++ T RL
Subjt:  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVI-IISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRL

Query:  LIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR
        ++  SQ G ++G  G  + ++R ++GA I IL   Q P C S  E+D+VVQI+G+ P V +A+  I ++LR
Subjt:  LIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR

P57721 Poly(rC)-binding protein 31.7e-1030.41Show/hide
Query:  RIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGS
        R+++  K++G +IGK G  ++K+REE+ A I I++      ER++ I+        TDA      + A   +ED  +       T      T+RL++  S
Subjt:  RIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGS

Query:  QAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPR
        Q GSLIG  G  I+++R S+GA + + A + LP     + ++R V ISG   A+++ +++I   +  +PP+
Subjt:  QAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPR

P58223 KH domain-containing protein At4g183751.0e-1028.14Show/hide
Query:  KRRREDDLIVSNSEAVDVSAPKRQAKAHD-------VLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIII------------SS
        +R++   +  +NSE+   +  +++  +HD       V++RI+ P   +G VIGK G  I  +R  TKA IK+ D +    +RVI I             +
Subjt:  KRRREDDLIVSNSEAVDVSAPKRQAKAHD-------VLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIII------------SS

Query:  KDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAPN-QLPLCASAHESDRVVQIS
        K     +  A+ AL  +   I+  D  +    K           RLL+  SQ+ SLIG +G+NI+++R  + A++ +++ +   P    A E D VV IS
Subjt:  KDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAPN-QLPLCASAHESDRVVQIS

Query:  GDVPAVLKALEEIGNQLRVNPPRQVISVSPT
        G+  +V +AL  +   +    PR+ I +  T
Subjt:  GDVPAVLKALEEIGNQLRVNPPRQVISVSPT

Q9SR13 Flowering locus K homology domain2.1e-1631.58Show/hide
Query:  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK-DCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRL
        + +FR++VP++++G +IG+ G  I+K+ EET+A IKI D      ER +++S K + E+S+  +   L  +   I+  DG   E  +       +   RL
Subjt:  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK-DCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRL

Query:  LIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR-------VNPPRQVISVSPTYNYNAMHPP
        L+  SQAGSLIG  G  ++ ++ +S   + +L    LP+ A   + DRVV++ G+  +V +ALE I + LR       + P  +     PT   + M PP
Subjt:  LIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR-------VNPPRQVISVSPTYNYNAMHPP

Query:  QSYIDPTSG
             P  G
Subjt:  QSYIDPTSG

Q9SZH4 RNA-binding KH domain-containing protein PEPPER4.6e-1632.75Show/hide
Query:  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDG-TSIEELKVGTGHVAANTIRL
        D +FR+IVP  ++G +IG+ G  I+K+ EET+A IK+ D      +R+++IS K  E        A+  +  +  +  G    ++  V       +++RL
Subjt:  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDG-TSIEELKVGTGHVAANTIRL

Query:  LIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR
        L+A +QA +LIG  G  I+ +  +SGA++ IL+  + P  A+  + +R+V + G+   +LKALE I   LR
Subjt:  LIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR

Arabidopsis top hitse value%identityAlignment
AT1G14170.2 RNA-binding KH domain-containing protein4.7e-1631.07Show/hide
Query:  HDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDCE--------NSVTDAEKALQHIAALIL----KEDGTSIEELKV
        HD ++R + P K+ G +IGK G   +++R ETK+ ++I +A+   EERV+ + S + E          V  A  AL  +  +++    ++DGT  +    
Subjt:  HDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDCE--------NSVTDAEKALQHIAALIL----KEDGTSIEELKV

Query:  GTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPR-QVISVSPTYNY
          G     T+R+L+   Q G +IG  GQ I+ LRN + A I ++  + LP CA     D ++ I G+   V +AL ++ + L  NP R Q + +S   + 
Subjt:  GTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPR-QVISVSPTYNY

Query:  NAMHPP
        ++MH P
Subjt:  NAMHPP

AT3G04610.1 RNA-binding KH domain-containing protein1.5e-1731.58Show/hide
Query:  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK-DCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRL
        + +FR++VP++++G +IG+ G  I+K+ EET+A IKI D      ER +++S K + E+S+  +   L  +   I+  DG   E  +       +   RL
Subjt:  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK-DCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRL

Query:  LIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR-------VNPPRQVISVSPTYNYNAMHPP
        L+  SQAGSLIG  G  ++ ++ +S   + +L    LP+ A   + DRVV++ G+  +V +ALE I + LR       + P  +     PT   + M PP
Subjt:  LIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR-------VNPPRQVISVSPTYNYNAMHPP

Query:  QSYIDPTSG
             P  G
Subjt:  QSYIDPTSG

AT4G26000.1 RNA-binding KH domain-containing protein3.3e-1732.75Show/hide
Query:  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDG-TSIEELKVGTGHVAANTIRL
        D +FR+IVP  ++G +IG+ G  I+K+ EET+A IK+ D      +R+++IS K  E        A+  +  +  +  G    ++  V       +++RL
Subjt:  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDG-TSIEELKVGTGHVAANTIRL

Query:  LIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR
        L+A +QA +LIG  G  I+ +  +SGA++ IL+  + P  A+  + +R+V + G+   +LKALE I   LR
Subjt:  LIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR

AT5G15270.1 RNA-binding KH domain-containing protein1.3e-2135.2Show/hide
Query:  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK--------DCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHV
        D +FR + P K+IG VIG+ G  ++++R +T++ I+I +A+   +ERVI I S         D E  ++ A+ AL  I   ++ +D  S E+   G   V
Subjt:  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK--------DCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHV

Query:  AANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNA
           T +LL+   Q G ++G  GQ ++ +R+ +GA I I+    +PLCA    SD ++QISG+V  V KAL +I ++L  NP R    +S +  Y A
Subjt:  AANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNA

AT5G15270.2 RNA-binding KH domain-containing protein1.3e-2135.2Show/hide
Query:  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK--------DCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHV
        D +FR + P K+IG VIG+ G  ++++R +T++ I+I +A+   +ERVI I S         D E  ++ A+ AL  I   ++ +D  S E+   G   V
Subjt:  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK--------DCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHV

Query:  AANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNA
           T +LL+   Q G ++G  GQ ++ +R+ +GA I I+    +PLCA    SD ++QISG+V  V KAL +I ++L  NP R    +S +  Y A
Subjt:  AANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACCAGGTGATATTCCTCTATACCCTTCCATGCCCGCCATGGCTCCCCTGCCTGTTTCTATGCCCTTACCCGGGACTCTCTTGGTTTCCGACTCCGGACATACCGT
CACTGGGAAACGCCGCCGTGAGGACGACCTGATTGTATCCAATTCGGAGGCCGTAGATGTATCGGCTCCCAAGAGACAGGCGAAGGCTCATGACGTGCTTTTCAGAATCA
TTGTGCCCTCGAAGCAGATCGGGAAGGTTATCGGTAAAGTTGGTTGCCGAATCCAGAAGGTTCGTGAGGAAACCAAAGCTACAATCAAGATTGCCGATGCTGTCGCGCGG
TATGAAGAACGTGTTATCATTATAAGTTCCAAGGACTGTGAGAATTCGGTTACTGATGCGGAGAAAGCACTTCAGCATATTGCAGCACTGATACTGAAGGAGGATGGCAC
CAGTATTGAGGAACTAAAAGTTGGAACGGGGCATGTGGCTGCTAATACTATTAGGCTCCTAATAGCAGGATCTCAAGCAGGGTCTTTGATTGGTGCCTCGGGTCAAAATA
TTGAGAAATTGAGGAATTCTTCTGGTGCAACAATTACGATTCTCGCCCCAAATCAATTACCTCTTTGTGCATCTGCTCATGAATCTGACAGAGTGGTGCAAATATCAGGG
GATGTTCCTGCAGTTTTGAAGGCTCTTGAGGAGATAGGCAATCAGCTAAGGGTAAATCCACCTCGGCAAGTCATTTCTGTTAGCCCAACATATAATTACAATGCAATGCA
CCCGCCACAGTCATATATTGATCCAACCTCAGGAAAACCAATCTTGCAGTTAATTATGTAA
mRNA sequenceShow/hide mRNA sequence
TGGCTATATGCTAGAGAACTAGCGCACTCGCCTTCCCACGCCCTTTGTTGGTTCTCTATGGTATCATCGGCTATTATCATCATTTCTCTTCTGCATTCACGCCTTCCCAG
CCTGATACGGCCATCTTTCATAGCCCACTGACGTGAAGATTCCTCCAAATATGCAACCAGGTGATATTCCTCTATACCCTTCCATGCCCGCCATGGCTCCCCTGCCTGTT
TCTATGCCCTTACCCGGGACTCTCTTGGTTTCCGACTCCGGACATACCGTCACTGGGAAACGCCGCCGTGAGGACGACCTGATTGTATCCAATTCGGAGGCCGTAGATGT
ATCGGCTCCCAAGAGACAGGCGAAGGCTCATGACGTGCTTTTCAGAATCATTGTGCCCTCGAAGCAGATCGGGAAGGTTATCGGTAAAGTTGGTTGCCGAATCCAGAAGG
TTCGTGAGGAAACCAAAGCTACAATCAAGATTGCCGATGCTGTCGCGCGGTATGAAGAACGTGTTATCATTATAAGTTCCAAGGACTGTGAGAATTCGGTTACTGATGCG
GAGAAAGCACTTCAGCATATTGCAGCACTGATACTGAAGGAGGATGGCACCAGTATTGAGGAACTAAAAGTTGGAACGGGGCATGTGGCTGCTAATACTATTAGGCTCCT
AATAGCAGGATCTCAAGCAGGGTCTTTGATTGGTGCCTCGGGTCAAAATATTGAGAAATTGAGGAATTCTTCTGGTGCAACAATTACGATTCTCGCCCCAAATCAATTAC
CTCTTTGTGCATCTGCTCATGAATCTGACAGAGTGGTGCAAATATCAGGGGATGTTCCTGCAGTTTTGAAGGCTCTTGAGGAGATAGGCAATCAGCTAAGGGTAAATCCA
CCTCGGCAAGTCATTTCTGTTAGCCCAACATATAATTACAATGCAATGCACCCGCCACAGTCATATATTGATCCAACCTCAGGAAAACCAATCTTGCAGTTAATTATGTA
ACCTTTGAGATGTTGATATCGGAGACGTTGGTGGGTGGGTTGATTGGGATTGGTGGCTTCAACATATCAAGAATCAGAAATGAATCTGGGGCTACTATCAAGGTTTGTGG
TGGAAGAGGTGAACAAAATTACAGGCAAATACAATTTGGTGGAAGTGCTGAACAGGTAGCACTGGCAAAGCAAAGGGTTGATGAATATATTTATTCTCAGTTGATACGAC
AAGCTGGTGTTCAACAGACAGC
Protein sequenceShow/hide protein sequence
MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVAR
YEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISG
DVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTSGKPILQLIM