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Carg26738 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26738
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionFiber protein fb11
Genome locationCarg_Chr17:3596761..3600063
RNA-Seq ExpressionCarg26738
SyntenyCarg26738
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013814.1 hypothetical protein SDJN02_23983 [Cucurbita argyrosperma subsp. argyrosperma]2.1e-28100Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDVEGLSCITNHYDM
        MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDVEGLSCITNHYDM
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDVEGLSCITNHYDM
XP_022958795.1 uncharacterized protein LOC111459960 [Cucurbita moschata]3.6e-20100Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
        MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
XP_022959928.1 uncharacterized protein LOC111460833 [Cucurbita moschata]1.5e-1892.73Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
        MPVMEKLKMFVVQEPVV ASC+IGGIGLFLPAVVRPILDS+EASKQ PQPVLSDV
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
XP_023006679.1 uncharacterized protein LOC111499335 [Cucurbita maxima]4.7e-2098.18Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
        MPVMEKLKMFVVQEPVVVASCLIGG+GLFLPAVVRPILDSYEASKQAPQPVLSDV
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
XP_038875998.1 uncharacterized protein LOC120068338 [Benincasa hispida]1.2e-1894.55Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
        MPVMEKLKMFVVQEPVV ASCLIGGIGLFLPA VRPILDSYEASKQ PQPVLSDV
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
TrEMBL top hitse value%identityAlignment
A0A068UM29 Uncharacterized protein9.5e-1992.73Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
        MPVMEKLKMFVVQEPVV ASCLIGGIGLFLPAVVRPILDS+E+SKQ PQPVLSDV
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
A0A6J1H4H1 uncharacterized protein LOC1114599601.7e-20100Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
        MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
A0A6J1H9H3 uncharacterized protein LOC1114608337.3e-1992.73Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
        MPVMEKLKMFVVQEPVV ASC+IGGIGLFLPAVVRPILDS+EASKQ PQPVLSDV
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
A0A6J1L1A7 uncharacterized protein LOC1114981907.3e-1992.73Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
        MPVMEKLKMFVVQEPVV ASC+IGGIGLFLPAVVRPILDS+EASKQ PQPVLSDV
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
A0A6J1L2U6 uncharacterized protein LOC1114993352.3e-2098.18Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
        MPVMEKLKMFVVQEPVVVASCLIGG+GLFLPAVVRPILDSYEASKQAPQPVLSDV
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46540.1 unknown protein9.4e-1981.82Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV
        MPVMEKL+MFV QEPVV ASCLIGG+GLFLPAVVRPILDS EASKQ   P L+DV
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGTCATGGAGAAGCTGAAGATGTTCGTAGTTCAAGAGCCCGTAGTGGTTGCATCTTGTCTAATCGGAGGAATTGGTCTTTTCCTTCCTGCCGTCGTAAGACCAAT
TCTGGATTCATACGAAGCATCTAAGCAAGCTCCTCAGCCTGTATTAAGTGATGTTGAAGGTTTAAGTTGCATTACGAATCATTATGATATGTAG
mRNA sequenceShow/hide mRNA sequence
TAAAGATCAAAATCAGTTTGGTTCTATCGTTCTCTGGTCCGGTCCATCCAAAAACCGCAAATCTTTTCAGTCGTAAACTTTGGACTTCGAAGAATCAAGCCACGAACGTT
CAGTTCAGGAAGCGAATCAGACGAAACCTTCAAGAAAATGCCGGTCATGGAGAAGCTGAAGATGTTCGTAGTTCAAGAGCCCGTAGTGGTTGCATCTTGTCTAATCGGAG
GAATTGGTCTTTTCCTTCCTGCCGTCGTAAGACCAATTCTGGATTCATACGAAGCATCTAAGCAAGCTCCTCAGCCTGTATTAAGTGATGTTGAAGGTTTAAGTTGCATT
ACGAATCATTATGATATGTAG
Protein sequenceShow/hide protein sequence
MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDVEGLSCITNHYDM