; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg26745 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26745
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionU3 small nucleolar ribonucleoprotein protein IMP3
Genome locationCarg_Chr14:8735885..8738045
RNA-Seq ExpressionCarg26745
SyntenyCarg26745
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005840 - ribosome (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0034457 - Mpp10 complex (cellular component)
GO:0019843 - rRNA binding (molecular function)
GO:0030515 - snoRNA binding (molecular function)
InterPro domainsIPR001912 - Ribosomal protein S4/S9, N-terminal
IPR002942 - RNA-binding S4 domain
IPR022801 - Ribosomal protein S4/S9
IPR036986 - RNA-binding S4 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041194.1 U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. makuwa]2.4e-9596.17Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRE QVMHRYHITGRDDYKKYSS+CRGVQKLV+MLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETV DPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDD+DA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC

XP_004153543.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Cucumis sativus]3.2e-9595.63Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRE QVMHRYHITGRDDYKKYSS+CRGVQKLV+MLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETV DPAFLVTRNMEDFITWVDSSKIKRK+LQYND+LDD+DA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC

XP_022955364.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Cucurbita moschata]1.8e-98100Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC

XP_022980729.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Cucurbita maxima]6.9e-9899.45Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLV MLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC

XP_038880355.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Benincasa hispida]9.3e-9595.08Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRE QVMHRYHITGRDDYKKYSS+CRGVQKLV+MLKKMN+KDPFRLE+TEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETV DPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDD+DA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC

TrEMBL top hitse value%identityAlignment
A0A0A0KZG3 S4 RNA-binding domain-containing protein1.5e-9595.63Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRE QVMHRYHITGRDDYKKYSS+CRGVQKLV+MLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETV DPAFLVTRNMEDFITWVDSSKIKRK+LQYND+LDD+DA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC

A0A5D3BRX0 U3 small nucleolar ribonucleoprotein IMP3-like isoform X11.2e-9596.17Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRE QVMHRYHITGRDDYKKYSS+CRGVQKLV+MLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETV DPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDD+DA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC

A0A5D3DJI4 U3 small nucleolar ribonucleoprotein IMP3-like isoform X15.9e-9595.63Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRE QVMHRYHITGRDDYKKYSS+CRGVQKLV+MLKKMNEKDPFR ELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETV DPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDD+DA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC

A0A6J1GW22 U3 small nucleolar ribonucleoprotein protein IMP38.7e-99100Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC

A0A6J1J025 U3 small nucleolar ribonucleoprotein protein IMP33.3e-9899.45Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLV MLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC

SwissProt top hitse value%identityAlignment
O13835 U3 small nucleolar ribonucleoprotein protein imp31.5e-4748.63Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKR-EGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSL-NLCDR
        MR LK HEQKLL+KV+FL +K  +  HR+  VM RYHI+ R++Y+KY+ IC   ++L   L  ++  DPFRL+    LLEKL++MG++P++  + ++ ++
Subjt:  MRKLKFHEQKLLKKVNFLEWKR-EGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSL-NLCDR

Query:  LSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAM
         +VS+ CRRRL  ++ +L+ ++ + EA   IEQGH+RVGP  + DPA+LVTR++EDF+TW D+SKIKR + +YNDKLDD+D +
Subjt:  LSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAM

P32899 U3 small nucleolar ribonucleoprotein protein IMP32.2e-5455.56Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSL-NLCDRL
        +RKLK HEQKLLKKV+FLEWK++ GHR+TQVM  YHI  R+DY KY+ IC  +++L + L  +   DPFR +  + LL+KLY MGV+ T+  + +L +++
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSL-NLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFD
        +VS+ CRRRL  ++ RLK AE +++AV +IEQGH+RVGP  +NDPA+LVTRNMED++TWVD+SKIK+ +L+Y +++DDFD
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFD

Q3T0M3 U3 small nucleolar ribonucleoprotein protein IMP34.4e-5556.67Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWK-REGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRL
        +RKLKFHEQKLLK+V+FL W+  +    E +V+ RY +  R+DY +Y+ + R V++L   L+ + E+DPFR+  +  LL+KLY +G++PTR S  LCD +
Subjt:  MRKLKFHEQKLLKKVNFLEWK-REGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFD
        + SSFCRRRL TVL++L+ A+HL+ AV ++EQGH+RVGP+ V DPAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DDFD
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFD

Q921Y2 U3 small nucleolar ribonucleoprotein protein IMP35.2e-5657.22Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWK-REGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRL
        +RKLKFHEQKLLK+V+FL W+  +    E +V+ RY +  R++Y +Y+ + R V++L   L+ + E+DPFR+  +  LL+KLY MG++PTR SL LCD +
Subjt:  MRKLKFHEQKLLKKVNFLEWK-REGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFD
        S SSFCRRRL T+L++L+ A+HL+ AV ++EQGH+RVGP+ V DPAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DDFD
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFD

Q9NV31 U3 small nucleolar ribonucleoprotein protein IMP35.7e-5556.67Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWK-REGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRL
        +RKLKFHEQKLLK+V+FL W+  +    E +V+ RY +  R+DY +Y+ + R V++L   L+ + E+D FR+  +  LL+KLY +G++PTR SL LCD +
Subjt:  MRKLKFHEQKLLKKVNFLEWK-REGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFD
        + SSFCRRRL TVL++L+ A+HL+ AV ++EQGH+RVGP+ V DPAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DDFD
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFD

Arabidopsis top hitse value%identityAlignment
AT5G15200.1 Ribosomal protein S42.0e-0725Show/hide
Query:  WKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQS-LNLCDRLSVSSFCRRRLSTVLVRLKF
        +++E    E +++  Y +  + +  +       ++     L  ++EK P R+   E LL ++   G++   Q+ L+    L+V +F  RRL T++ +   
Subjt:  WKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQS-LNLCDRLSVSSFCRRRLSTVLVRLKF

Query:  AEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSS
        A+ +  +   I Q HIRVG + VN P+F+V  + +  I +  +S
Subjt:  AEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSS

AT5G15750.1 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein2.0e-7976.24Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLK+HE+KL+KKVNFLEWKREG HRE ++ +RYH+  RDDYKKYS +CR VQKL +++K+M+  DPFR+++T+ LLEKLYNMGVIPTR+SL L +RLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAM
        VSSFCRRRLSTVLV LKFAEH +EAVTYIEQGH+RVGPET+ DPAFLVTRNMEDFITWVDSSKIKRKVL+YND LDD+D +
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAM

AT5G39850.1 Ribosomal protein S41.6e-0726.92Show/hide
Query:  WKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVI-PTRQSLNLCDRLSVSSFCRRRLSTVLVRLKF
        +++E    E +++  Y +  + +  +       ++     L  ++EK+P R+   E LL ++   G++  T+  L+    L+V +F  RRL T++ +   
Subjt:  WKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVI-PTRQSLNLCDRLSVSSFCRRRLSTVLVRLKF

Query:  AEHLREAVTYIEQGHIRVGPETVNDPAFLV
        A+ +  A   I Q HIRVG + VN P+F+V
Subjt:  AEHLREAVTYIEQGHIRVGPETVNDPAFLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAGCTTAAGTTTCACGAGCAGAAGCTTTTGAAGAAGGTCAACTTCTTAGAATGGAAGAGAGAAGGAGGTCATAGAGAAACCCAAGTCATGCATCGCTATCACAT
CACCGGTCGGGATGATTACAAGAAGTATTCGAGCATATGCCGGGGCGTCCAGAAGCTGGTTAGCATGTTGAAGAAGATGAACGAGAAAGACCCTTTCCGATTGGAATTAA
CCGAGAAACTCCTCGAAAAGCTGTACAATATGGGTGTGATACCAACCCGACAGAGCTTGAATTTATGCGATCGCCTGTCAGTGTCATCCTTTTGCAGACGGAGGCTGTCG
ACAGTACTGGTACGTTTGAAATTCGCAGAGCACTTGAGGGAAGCTGTTACATACATTGAGCAAGGGCATATTAGAGTTGGTCCAGAGACAGTTAATGACCCAGCATTTCT
AGTTACAAGGAACATGGAGGACTTCATAACATGGGTTGATTCATCGAAGATAAAGAGAAAGGTTCTACAATACAACGATAAGTTGGATGATTTCGATGCAATGAACTGTT
GA
mRNA sequenceShow/hide mRNA sequence
ATCTATCTCTGCCGTCGCCCACAATCTTTTCCTTGCCACTCCCTCGTCTCTTCTCCCACGTTCCCTTCTCCGCTGAGACTCCCGTTTGTTCGACACCAAGACCTTCCTCG
GTTGCCAAGTGTTTTGAGGTGAAACAGAGGAGCCGATGAGGAAGCTTAAGTTTCACGAGCAGAAGCTTTTGAAGAAGGTCAACTTCTTAGAATGGAAGAGAGAAGGAGGT
CATAGAGAAACCCAAGTCATGCATCGCTATCACATCACCGGTCGGGATGATTACAAGAAGTATTCGAGCATATGCCGGGGCGTCCAGAAGCTGGTTAGCATGTTGAAGAA
GATGAACGAGAAAGACCCTTTCCGATTGGAATTAACCGAGAAACTCCTCGAAAAGCTGTACAATATGGGTGTGATACCAACCCGACAGAGCTTGAATTTATGCGATCGCC
TGTCAGTGTCATCCTTTTGCAGACGGAGGCTGTCGACAGTACTGGTACGTTTGAAATTCGCAGAGCACTTGAGGGAAGCTGTTACATACATTGAGCAAGGGCATATTAGA
GTTGGTCCAGAGACAGTTAATGACCCAGCATTTCTAGTTACAAGGAACATGGAGGACTTCATAACATGGGTTGATTCATCGAAGATAAAGAGAAAGGTTCTACAATACAA
CGATAAGTTGGATGATTTCGATGCAATGAACTGTTGAGAGATGAGTAGTTCTATCCAAGTTTTGGTTCCTTTTTTTGAGCACCTCATCTTGTATGAATCCTTTCTCTCCC
ACCCTTATTGAATTGGCTAATTAATATAGCATTGAGTGTTCTTCCATTTCCTTTTCTCATACCATATATAATTTACATTGTTTTATGTTACGAGCCTCATATCTCAGCTT
CATCGATATTGCATAGCATGTAAGGTTGAATTCTTTTCTACCATTTTATATCTAATTGTGATATGTAGGGCTGTATTGATATATTTGATATCTATTTCTATTTGTTATAA
ACTTCATTAATTACAACAATTGTAATGATGAATTTATTAGGAACCTTCTATGTATTTTGGTCATTCTATGAAGACTATATATTTTTTTAAAAAATAACCAATCTTATTTA
CC
Protein sequenceShow/hide protein sequence
MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLSVSSFCRRRLS
TVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC