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Carg26760 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26760
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr05:10114626..10115139
RNA-Seq ExpressionCarg26760
SyntenyCarg26760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030230.1 hypothetical protein SDJN02_08577, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-46100Show/hide
Query:  MRQEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSISNWENCHPVRLTSRPFWGLVSSSSRNLVLAGYWVGPDVDDGWGYIEAFVDRIT
        MRQEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSISNWENCHPVRLTSRPFWGLVSSSSRNLVLAGYWVGPDVDDGWGYIEAFVDRIT
Subjt:  MRQEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSISNWENCHPVRLTSRPFWGLVSSSSRNLVLAGYWVGPDVDDGWGYIEAFVDRIT

XP_022946526.1 uncharacterized protein LOC111450562 [Cucurbita moschata]2.3e-4395.4Show/hide
Query:  QEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSISNWENCHPVRLTSRPFWGLVSSSSRNLVLAGYWVGPDVDDGWGYIEAFVDRIT
        +EMPPWKLAKVTVVPRRAGTASK VLSCC+NKSISNWENCHPVRLTSRPFWG+VSSSSRNLVLAGYWVGPDVDDGWGYIEAFVDRIT
Subjt:  QEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSISNWENCHPVRLTSRPFWGLVSSSSRNLVLAGYWVGPDVDDGWGYIEAFVDRIT

XP_022999037.1 uncharacterized protein LOC111493548 [Cucurbita maxima]2.4e-4093.18Show/hide
Query:  QEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSIS-NWENCHPVRLTSRPFWGLVSSSSRNLVLAGYWVGPDVDDGWGYIEAFVDRIT
        +EMPPWKLAKVTVVPRRAGTASK VLSCCSNKSIS NWENC PVRLTSRPFWG+VSSSSRNLVLAGYWVGPDVDDGWGYIEA VDRIT
Subjt:  QEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSIS-NWENCHPVRLTSRPFWGLVSSSSRNLVLAGYWVGPDVDDGWGYIEAFVDRIT

XP_023545344.1 uncharacterized protein LOC111804783 isoform X1 [Cucurbita pepo subsp. pepo]1.3e-4194.32Show/hide
Query:  QEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSIS-NWENCHPVRLTSRPFWGLVSSSSRNLVLAGYWVGPDVDDGWGYIEAFVDRIT
        +EMPPWKLAKVTVVPRRAGTAS  VLSCCSNKSIS NWENCHPVRLTSRPFWG+VSSSSRNLVLAGYWVGPDVDDGWGYIEAFVDRIT
Subjt:  QEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSIS-NWENCHPVRLTSRPFWGLVSSSSRNLVLAGYWVGPDVDDGWGYIEAFVDRIT

XP_038890542.1 uncharacterized protein LOC120080060 [Benincasa hispida]2.9e-3380.9Show/hide
Query:  QEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSIS-NWENCHPVRLTSRPFWGLVSSSSRNLV-LAGYWVGPDVDDGWGYIEAFVDRIT
        +E+PP KL++VTVV  RAGTASKLVLSCCSN SIS NW+NCHPVRLT RPFWG+VSSSSR +V L+GYWVGPDVDDGWGYIEAF+DRIT
Subjt:  QEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSIS-NWENCHPVRLTSRPFWGLVSSSSRNLV-LAGYWVGPDVDDGWGYIEAFVDRIT

TrEMBL top hitse value%identityAlignment
A0A0A0LJQ7 Uncharacterized protein4.2e-3078.65Show/hide
Query:  QEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSIS-NWENCHPVRLTSRPFWGLVSSSSRNLV-LAGYWVGPDVDDGWGYIEAFVDRIT
        +E+PP KLAK T+V RRAGTASKLVL   S KSIS NWEN   VRLTSRPFWG+VSSSSRN+V L GYWVGPDVDDGWGYIEAF+DRIT
Subjt:  QEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSIS-NWENCHPVRLTSRPFWGLVSSSSRNLV-LAGYWVGPDVDDGWGYIEAFVDRIT

A0A5A7U1B8 Uncharacterized protein2.4e-3382.02Show/hide
Query:  QEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSIS-NWENCHPVRLTSRPFWGLVSSSSRNLV-LAGYWVGPDVDDGWGYIEAFVDRIT
        +E+PPWKLAK TVV RRAGTASKLVL C S KSIS NWEN   VRLTSRPFWG+VSSSSRN+V L GYWVGPDVDDGWGYIEAF+DRIT
Subjt:  QEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSIS-NWENCHPVRLTSRPFWGLVSSSSRNLV-LAGYWVGPDVDDGWGYIEAFVDRIT

A0A5D3CPK7 Uncharacterized protein1.2e-3280.9Show/hide
Query:  QEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSIS-NWENCHPVRLTSRPFWGLVSSSSRNLV-LAGYWVGPDVDDGWGYIEAFVDRIT
        +E+PPWKLAK TVV RRAGTA KLVL C S KSIS NWEN   VRLTSRPFWG+VSSSSRN+V L GYWVGPDVDDGWGYIEAF+DRIT
Subjt:  QEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSIS-NWENCHPVRLTSRPFWGLVSSSSRNLV-LAGYWVGPDVDDGWGYIEAFVDRIT

A0A6J1G3X3 uncharacterized protein LOC1114505621.1e-4395.4Show/hide
Query:  QEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSISNWENCHPVRLTSRPFWGLVSSSSRNLVLAGYWVGPDVDDGWGYIEAFVDRIT
        +EMPPWKLAKVTVVPRRAGTASK VLSCC+NKSISNWENCHPVRLTSRPFWG+VSSSSRNLVLAGYWVGPDVDDGWGYIEAFVDRIT
Subjt:  QEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSISNWENCHPVRLTSRPFWGLVSSSSRNLVLAGYWVGPDVDDGWGYIEAFVDRIT

A0A6J1K9Q0 uncharacterized protein LOC1114935481.2e-4093.18Show/hide
Query:  QEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSIS-NWENCHPVRLTSRPFWGLVSSSSRNLVLAGYWVGPDVDDGWGYIEAFVDRIT
        +EMPPWKLAKVTVVPRRAGTASK VLSCCSNKSIS NWENC PVRLTSRPFWG+VSSSSRNLVLAGYWVGPDVDDGWGYIEA VDRIT
Subjt:  QEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSIS-NWENCHPVRLTSRPFWGLVSSSSRNLVLAGYWVGPDVDDGWGYIEAFVDRIT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCAGGAAATGCCACCATGGAAACTGGCTAAAGTCACAGTAGTTCCAAGGCGAGCTGGAACAGCTTCGAAGCTTGTGCTATCCTGTTGCTCAAATAAATCCATATC
TAATTGGGAAAACTGCCATCCTGTACGGTTAACTTCAAGACCATTTTGGGGATTAGTTTCTTCTAGTTCCAGGAATTTGGTATTAGCTGGCTACTGGGTAGGACCTGATG
TTGATGACGGATGGGGATATATAGAAGCTTTTGTCGATCGGATTACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGTCAGGAAATGCCACCATGGAAACTGGCTAAAGTCACAGTAGTTCCAAGGCGAGCTGGAACAGCTTCGAAGCTTGTGCTATCCTGTTGCTCAAATAAATCCATATC
TAATTGGGAAAACTGCCATCCTGTACGGTTAACTTCAAGACCATTTTGGGGATTAGTTTCTTCTAGTTCCAGGAATTTGGTATTAGCTGGCTACTGGGTAGGACCTGATG
TTGATGACGGATGGGGATATATAGAAGCTTTTGTCGATCGGATTACTTAA
Protein sequenceShow/hide protein sequence
MRQEMPPWKLAKVTVVPRRAGTASKLVLSCCSNKSISNWENCHPVRLTSRPFWGLVSSSSRNLVLAGYWVGPDVDDGWGYIEAFVDRIT