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Carg26780 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26780
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAuxin responsive SAUR protein
Genome locationCarg_Chr15:6696450..6698600
RNA-Seq ExpressionCarg26780
SyntenyCarg26780
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605808.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]7.9e-4279.28Show/hide
Query:  KHQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGIIHHDHHPH
        KHQHL  LN  FH+HLPHF   HHR+K +TPKGCLA+LVGQ+QERFVIPVIYVNHPLF +LLK+AEDEYGFDQKGPI+IPCPVDDFRTLQGIIHHD   H
Subjt:  KHQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGIIHHDHHPH

Query:  HLLPISCFRDS
        H L ISCFR S
Subjt:  HLLPISCFRDS

KAG7016800.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-89100Show/hide
Query:  MGFGGSGGGGDKHQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTL
        MGFGGSGGGGDKHQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTL
Subjt:  MGFGGSGGGGDKHQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTL

Query:  QGIIHHDHHPHHLLPISCFRDSKDYKELGGEMGKNAIHGTSSFLFMFLNRMALFYSVF
        QGIIHHDHHPHHLLPISCFRDSKDYKELGGEMGKNAIHGTSSFLFMFLNRMALFYSVF
Subjt:  QGIIHHDHHPHHLLPISCFRDSKDYKELGGEMGKNAIHGTSSFLFMFLNRMALFYSVF

KGN49830.1 hypothetical protein Csa_000428 [Cucumis sativus]7.1e-5183.9Show/hide
Query:  GGGGDK--HQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGII
        G GGDK  HQHLLHLNFHFH+H PHF  +HHRNKVETPKGCLAILVGQ+Q+RF IPVIYVNHPLF +LLK+AEDEYGFDQKGPI+IPCPVDDFRTLQGII
Subjt:  GGGGDK--HQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGII

Query:  HHDHHPHHLLPISCFRDS
        +HDHH HH LP+SCFRDS
Subjt:  HHDHHPHHLLPISCFRDS

XP_022974339.1 auxin-responsive protein SAUR32-like [Cucurbita maxima]3.0e-6597.52Show/hide
Query:  GFGGSGGGGDKHQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQ
        G GG GGGGDKHQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFA+LLKEAEDEYGFDQKGPIAIPCPVDDFRTLQ
Subjt:  GFGGSGGGGDKHQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQ

Query:  GIIHHDHHPHHLLPISCFRDS
        GIIHHDHHPHHLLPISCFRDS
Subjt:  GIIHHDHHPHHLLPISCFRDS

XP_023549648.1 auxin-responsive protein SAUR32 [Cucurbita pepo subsp. pepo]1.0e-6598.35Show/hide
Query:  GFGGSGGGGDKHQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQ
        G GG GGGGDKHQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQ
Subjt:  GFGGSGGGGDKHQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQ

Query:  GIIHHDHHPHHLLPISCFRDS
        GIIHHDHHPHHLLPISCFRDS
Subjt:  GIIHHDHHPHHLLPISCFRDS

TrEMBL top hitse value%identityAlignment
A0A0A0KJC7 Uncharacterized protein3.4e-5183.9Show/hide
Query:  GGGGDK--HQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGII
        G GGDK  HQHLLHLNFHFH+H PHF  +HHRNKVETPKGCLAILVGQ+Q+RF IPVIYVNHPLF +LLK+AEDEYGFDQKGPI+IPCPVDDFRTLQGII
Subjt:  GGGGDK--HQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGII

Query:  HHDHHPHHLLPISCFRDS
        +HDHH HH LP+SCFRDS
Subjt:  HHDHHPHHLLPISCFRDS

A0A2P5DFD6 Small auxin-up RNA3.2e-3361.29Show/hide
Query:  SGGGGDKHQHLLHLNFHFHIHLPHFHHHHHRNK----VETPKGCLAILVG---QQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFR
        SG   +KH    H+NFH HI   HFHHHH +NK     + PKGCLA++VG   +Q++RFVIPVIY+NHPLF +LLKEAE+EYGFDQKGPIAIPC VD FR
Subjt:  SGGGGDKHQHLLHLNFHFHIHLPHFHHHHHRNK----VETPKGCLAILVG---QQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFR

Query:  TLQGII----------HHDHHPHH
        T+QGII          H DHHPHH
Subjt:  TLQGII----------HHDHHPHH

A0A2P5E6P5 Small auxin-up RNA9.4e-3355.24Show/hide
Query:  SGGGGDKHQHLLHLNFHFHIHLPHFHHHHHRNKVE---------TPKGCLAILVG---QQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCP
        SG   +KH    H+NFH HI   HFHHHHH +  E          PKGCLA++VG   +Q++RFVIPVIY+NHPLF +LLKEAE+EYGFDQKGPIAIPC 
Subjt:  SGGGGDKHQHLLHLNFHFHIHLPHFHHHHHRNKVE---------TPKGCLAILVG---QQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCP

Query:  VDDFRTLQGII----------------HHDHHPHHLLPISCFR
        VD FRT+QGII                HH HH HH   I CFR
Subjt:  VDDFRTLQGII----------------HHDHHPHHLLPISCFR

A0A6J1AA25 auxin-responsive protein SAUR324.7e-3261.79Show/hide
Query:  GGGDKHQHLLHLNFHFHI-HLPHFHHHHHRNKVETPKGCLAILVGQ--QQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGII
        G GDKH    H+NFH H  HL  FHHH  ++  + PKGCLAILVGQ  +Q+RFVIPVIY+NHPLF +LLKEAE+EYGFDQKGPI IPC V++FR +QG I
Subjt:  GGGDKHQHLLHLNFHFHI-HLPHFHHHHHRNKVETPKGCLAILVGQ--QQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGII

Query:  -------HHDHHPHHLLPISCFR
               HH HH HH   I CFR
Subjt:  -------HHDHHPHHLLPISCFR

A0A6J1IHB8 auxin-responsive protein SAUR32-like1.4e-6597.52Show/hide
Query:  GFGGSGGGGDKHQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQ
        G GG GGGGDKHQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFA+LLKEAEDEYGFDQKGPIAIPCPVDDFRTLQ
Subjt:  GFGGSGGGGDKHQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQ

Query:  GIIHHDHHPHHLLPISCFRDS
        GIIHHDHHPHHLLPISCFRDS
Subjt:  GIIHHDHHPHHLLPISCFRDS

SwissProt top hitse value%identityAlignment
O22150 Auxin-responsive protein SAUR361.4e-1247.14Show/hide
Query:  HRNKVETPKGCLAILVGQQQ---ERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQ
        H+     P+G LAI VGQ+     R ++P++Y NHPLF  LL+EAE EYGF  +G I IPC   DF  ++
Subjt:  HRNKVETPKGCLAILVGQQQ---ERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQ

P33080 Auxin-induced protein X10A1.1e-1149.21Show/hide
Query:  VETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQ-KGPIAIPCPVDDFRTL
        VE PKG L + VG +  RF+IPV Y+N P F  LL +AE+E+G+D   G + IPC  D+F T+
Subjt:  VETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQ-KGPIAIPCPVDDFRTL

P33081 Auxin-induced protein 15A3.3e-1144.78Show/hide
Query:  ETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQ-KGPIAIPCPVDDFRTLQGIIH
        + PKG LA+ VG++ +RFVIPV Y+N P F  LL +AE+E+G+D   G + IPC  D F+ +   ++
Subjt:  ETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQ-KGPIAIPCPVDDFRTLQGIIH

P33082 Auxin-induced protein X151.1e-1147.69Show/hide
Query:  NKVETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQ-KGPIAIPCPVDDFRTL
        N V+ PKG LA+ VG++ +RFVIPV Y+N P F  LL +AE+E+G+D   G + IPC  + F+ +
Subjt:  NKVETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQ-KGPIAIPCPVDDFRTL

Q9ZUZ3 Auxin-responsive protein SAUR321.4e-2254Show/hide
Query:  ETPKGCLAILVGQQ---QERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGII-----------HHDHHP-----HHLLPISCFR
        + PKGCLAI VG Q   Q+RF++PV+Y NHPLF +LLKEAEDEYGFDQKG I IPC V++FR +Q +I           HH  H      HHL  + CFR
Subjt:  ETPKGCLAILVGQQ---QERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGII-----------HHDHHP-----HHLLPISCFR

Arabidopsis top hitse value%identityAlignment
AT2G46690.1 SAUR-like auxin-responsive protein family1.0e-2354Show/hide
Query:  ETPKGCLAILVGQQ---QERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGII-----------HHDHHP-----HHLLPISCFR
        + PKGCLAI VG Q   Q+RF++PV+Y NHPLF +LLKEAEDEYGFDQKG I IPC V++FR +Q +I           HH  H      HHL  + CFR
Subjt:  ETPKGCLAILVGQQ---QERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGII-----------HHDHHP-----HHLLPISCFR

AT3G60690.1 SAUR-like auxin-responsive protein family5.1e-1549.21Show/hide
Query:  PKGCLAILVGQQQ---ERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQ
        PKG  A+ +G++    +R ++P++Y NHPLF  LL+EAE+E+GF Q+G I IPCP  DF+ +Q
Subjt:  PKGCLAILVGQQQ---ERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQ

AT3G61900.1 SAUR-like auxin-responsive protein family5.3e-2059.15Show/hide
Query:  ETPKGCLAILVGQQQE---RFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGIIHHD
        + PKGCLAI VG ++E   RFV+PV Y NHPLF +LL+EAE+EYGF+QKG I IPC V+ FR +Q +I+ +
Subjt:  ETPKGCLAILVGQQQE---RFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGIIHHD

AT4G00880.1 SAUR-like auxin-responsive protein family2.4e-2851.16Show/hide
Query:  GGGDKHQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQ--QQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGII-
        G GDK      +  H+  H+P  HHH H ++ + PKGCLA+ VGQ  +QERFVIPV+Y NHPLF +LLKEAE+E+GF QKG I IPC V++FR +QG+I 
Subjt:  GGGDKHQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQ--QQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGII-

Query:  -------------HHDHHPHHLLPISCFR
                     HH HH +HL  I CFR
Subjt:  -------------HHDHHPHHLLPISCFR

AT5G53590.1 SAUR-like auxin-responsive protein family9.9e-2744.44Show/hide
Query:  HLLHLNFHFHIHLPHFH---HHHHRNKVETPKGCLAILVGQQQE-----RFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGIIH-
        H+ H+ F FH H+PH H   HHHH +  + PKGC+AI+VG + +     RFV+P+++++HPLF  LLKEAE EYGF   GPI IPC VD+F+ +Q +I  
Subjt:  HLLHLNFHFHIHLPHFH---HHHHRNKVETPKGCLAILVGQQQE-----RFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGIIH-

Query:  ------------HDHHPHHLLPISCF
                    H++H HH   + CF
Subjt:  ------------HDHHPHHLLPISCF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTTGGCGGCAGTGGCGGCGGTGGCGACAAGCATCAGCACCTCCTGCATCTGAATTTCCATTTCCATATTCATTTGCCTCACTTTCACCACCATCATCATCGGAA
CAAGGTGGAGACTCCCAAGGGGTGTTTGGCAATTCTCGTCGGCCAACAGCAAGAGCGGTTCGTGATTCCTGTCATTTATGTTAACCATCCTTTGTTCGCTCGGCTCTTGA
AGGAGGCCGAAGACGAGTATGGCTTCGACCAGAAAGGACCTATCGCCATCCCTTGCCCTGTCGACGACTTCCGTACTCTCCAGGGCATAATTCATCACGATCATCACCCC
CATCATCTTCTTCCCATCTCCTGTTTTAGGGATTCGAAGGATTATAAAGAACTGGGCGGTGAAATGGGAAAGAATGCAATACATGGTACATCCTCGTTTCTTTTTATGTT
TCTCAATCGCATGGCCCTCTTTTATTCAGTGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTTGGCGGCAGTGGCGGCGGTGGCGACAAGCATCAGCACCTCCTGCATCTGAATTTCCATTTCCATATTCATTTGCCTCACTTTCACCACCATCATCATCGGAA
CAAGGTGGAGACTCCCAAGGGGTGTTTGGCAATTCTCGTCGGCCAACAGCAAGAGCGGTTCGTGATTCCTGTCATTTATGTTAACCATCCTTTGTTCGCTCGGCTCTTGA
AGGAGGCCGAAGACGAGTATGGCTTCGACCAGAAAGGACCTATCGCCATCCCTTGCCCTGTCGACGACTTCCGTACTCTCCAGGGCATAATTCATCACGATCATCACCCC
CATCATCTTCTTCCCATCTCCTGTTTTAGGGATTCGAAGGATTATAAAGAACTGGGCGGTGAAATGGGAAAGAATGCAATACATGGTACATCCTCGTTTCTTTTTATGTT
TCTCAATCGCATGGCCCTCTTTTATTCAGTGTTTTGAAGCTGCTAGGAATCAAATTGATAATACAATAAGGAGGAAAAATGAATCAAGTGTACAGCTATTGAACTATCTG
CTTCTTCTGTGTGTTAATGTCTTGTATTAGAGTAGCGGATTGTAACACCATGTAGAAATCTTGTATATCCGAAAAAACTGAGTTTCCCATCAGAACTTCTTGTCCAATTC
TGGAGAAAAGAATGAGCTATAGGACCCAGATTCATTTCCTGAACACATTTTAAACTTGCACTTCAATTCACTGTTGTTAGTTGTGTAAAATGTAGTAATTCCAAGCGTCG
AATTGTTTCTTACCTGAACTAACTCATGTACTGAAATGACTCGATTTCCATCCTGCTCGAAATACTCGAAAGCTCGGGTGGCGATGCTTTCCCATCCTGCTACAGCCTCC
AGCTGATATACACTGATTGCAGCTGCGCAGAACTCCTCAAAGCCCATTCTTTTGTTAGCGAGAGGTTCCATCTAAATACAAGTTGGAAATGTTAGTGAAAAAGAATATCA
ACCACGGCCGGAGAGCATTATGCCAAAGTTGCAGAGAATGTAACTTGATTTTGGTATATGCATAAAAGGTGTAACAACCAAGCCCACTGCTAGCAGGTATTGTCATCTTT
GGACTTCCCTTTATAGGGAGAGGTTTCCACACCCTTATAAAGGGTATTTCGTTCTCCTCCCCAATCGACGTGGATCTAACAATCCACC
Protein sequenceShow/hide protein sequence
MGFGGSGGGGDKHQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFARLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGIIHHDHHP
HHLLPISCFRDSKDYKELGGEMGKNAIHGTSSFLFMFLNRMALFYSVF