CuGenDBv2

Gene ID	Carg26820
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic
Genome location	Carg_Chr18:11243696..11246751
RNA-Seq Expression	Carg26820
Synteny	Carg26820
Gene Ontology terms	GO:0010190 - cytochrome b6f complex assembly (biological process)
InterPro domains	IPR021325 - Cofactor assembly of complex C subunit B, CCB2/CCB4 IPR044970 - COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6574156.1 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

2.0e-160

99.66

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Query:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA
        MSCTILSPDPLIRLSSTHRFR KNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA
Subjt:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGGSE
        LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGGSE
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGGSE

KAG7013210.1 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

5.3e-161

100

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Query:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA
        MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA
Subjt:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGGSE
        LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGGSE
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGGSE

XP_022945332.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata]

8.0e-157

97.94

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Query:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA
        MSCTILSPDPLIRLSST RFR KNGSKSP+ITARLDDSKNSP+RQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+SAAPITSAQLRTEA
Subjt:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGGS
        LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGD+SGGS
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGGS

XP_022968395.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2 [Cucurbita maxima]

4.8e-154

96.56

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Query:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA
        MSCTILSPDPLIRLSST RFR KNGSKSP+ITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+SAAPITSAQLRTEA
Subjt:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQ+VSDNVKDDLAWATYILLRNTNSISVLI IQGELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGGS
        LQSIGLSALND+LYFPQISESGLWQML KGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGD+S GS
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGGS

XP_023542853.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo]

2.5e-158

98.28

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Query:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA
        MSCTILSPDPLIRLSSTHRFR KNGSKSP+ITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA
Subjt:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQ+VSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISG DLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGGS
        LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGD+SGGS
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGGS

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DSW9 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

9.6e-132

85.56

Show/hide

Query:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA
        M  +I SP PL +L+S   FR K+  K+P I+ARLDDSKNS N+QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAA  T AQLRTEA
Subjt:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSIALPYLGKFL+GAVPSGEATLPEG EQIF+LSQ VSDN+K+D+AWATYILLRNTNSISVLIQ QG LCVRGYWNSPNDIS ADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDN
        LQSIGLSAL DA+YFPQISESGLWQMLPKGTRSVLVQPV QNL QSGNEMEK+GGFIL+ASSLSYAFSDKDRAWIRALA KFD+
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDN

A0A5A7SUJ0 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2

9.6e-132

85.56

Show/hide

Query:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA
        M  +I SP PL +L+S   FR K+  K+P I+ARLDDSKNS N+QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAA  T AQLRTEA
Subjt:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSIALPYLGKFL+GAVPSGEATLPEG EQIF+LSQ VSDN+K+D+AWATYILLRNTNSISVLIQ QG LCVRGYWNSPNDIS ADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDN
        LQSIGLSAL DA+YFPQISESGLWQMLPKGTRSVLVQPV QNL QSGNEMEK+GGFIL+ASSLSYAFSDKDRAWIRALA KFD+
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDN

A0A6J1G0N4 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

3.9e-157

97.94

Show/hide

Query:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA
        MSCTILSPDPLIRLSST RFR KNGSKSP+ITARLDDSKNSP+RQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+SAAPITSAQLRTEA
Subjt:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGGS
        LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGD+SGGS
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGGS

A0A6J1HX31 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2

2.3e-154

96.56

Show/hide

Query:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA
        MSCTILSPDPLIRLSST RFR KNGSKSP+ITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+SAAPITSAQLRTEA
Subjt:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQ+VSDNVKDDLAWATYILLRNTNSISVLI IQGELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGGS
        LQSIGLSALND+LYFPQISESGLWQML KGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGD+S GS
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGGS

A0A6J1HXW3 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

5.2e-154

96.55

Show/hide

Query:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA
        MSCTILSPDPLIRLSST RFR KNGSKSP+ITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+SAAPITSAQLRTEA
Subjt:  MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQ+VSDNVKDDLAWATYILLRNTNSISVLI IQGELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGG
        LQSIGLSALND+LYFPQISESGLWQML KGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGD+S G
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGG

SwissProt top hits

e value

%identity

Alignment

Q9FJ81 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

1.1e-81

58.85

Show/hide

Query:  KSPLITARLDD---SKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAV
        +S  I AR ++      + ++QLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   +++API+ +Q+R+EALG+SLAAFSIALPY+GKFL+G+V
Subjt:  KSPLITARLDD---SKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAV

Query:  PSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDALYFPQISESGL
           + +LPE  EQ+FV+S ++ D++K+DLAWATY+LLRNT++I+VLI +QGELCVRGYWN P+ +S A L  WF++++  IGL+ + + LYFPQ + S L
Subjt:  PSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDALYFPQISESGL

Query:  -WQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKF
           +LP GTRS+ VQP+ QN     NE +K+ GF+LVAS+  YA+SDKDRAWI A+A KF
Subjt:  -WQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKF

Arabidopsis top hits

e value

%identity

Alignment

AT5G52110.1 Protein of unknown function (DUF2930)

8.1e-83

58.85

Show/hide

Query:  KSPLITARLDD---SKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAV
        +S  I AR ++      + ++QLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   +++API+ +Q+R+EALG+SLAAFSIALPY+GKFL+G+V
Subjt:  KSPLITARLDD---SKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAV

Query:  PSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDALYFPQISESGL
           + +LPE  EQ+FV+S ++ D++K+DLAWATY+LLRNT++I+VLI +QGELCVRGYWN P+ +S A L  WF++++  IGL+ + + LYFPQ + S L
Subjt:  PSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDALYFPQISESGL

Query:  -WQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKF
           +LP GTRS+ VQP+ QN     NE +K+ GF+LVAS+  YA+SDKDRAWI A+A KF
Subjt:  -WQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKF

AT5G52110.2 Protein of unknown function (DUF2930)

8.1e-83

58.85

Show/hide

Query:  KSPLITARLDD---SKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAV
        +S  I AR ++      + ++QLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   +++API+ +Q+R+EALG+SLAAFSIALPY+GKFL+G+V
Subjt:  KSPLITARLDD---SKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAV

Query:  PSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDALYFPQISESGL
           + +LPE  EQ+FV+S ++ D++K+DLAWATY+LLRNT++I+VLI +QGELCVRGYWN P+ +S A L  WF++++  IGL+ + + LYFPQ + S L
Subjt:  PSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDALYFPQISESGL

Query:  -WQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKF
           +LP GTRS+ VQP+ QN     NE +K+ GF+LVAS+  YA+SDKDRAWI A+A KF
Subjt:  -WQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGCTGCACAATTCTCTCTCCCGACCCGTTAATTCGGTTGTCATCCACTCACCGATTTCGCACTAAAAATGGGTCGAAGAGTCCATTGATTACTGCTCGTCTTGACGA
TTCTAAGAACTCGCCCAATCGCCAACTCAATCTCTCTGTTCTTCGCTTCACACTTGGGATTCCTGGATTGGATGAGTCTTACTTACCCAGATGGATTGGTTATGGATTTG
GTTCGCTTCTGCTCTTGAATCACTTTGTTGGTTCGAATTCAGCTGCTCCCATCACCTCAGCACAGTTAAGAACTGAGGCTTTAGGCATTTCCTTGGCTGCATTTTCTATT
GCACTCCCCTACTTGGGAAAGTTTCTTGAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGGTGCCGAGCAAATATTTGTCTTGTCACAAAGTGTATCGGATAA
TGTGAAGGATGACTTGGCTTGGGCAACATACATCTTGCTGCGCAATACAAACAGTATATCAGTGTTAATACAGATTCAAGGGGAGTTATGCGTTCGAGGATACTGGAATA
GTCCAAATGATATATCAGGAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTATCTGCATTAAATGATGCCCTCTATTTTCCTCAGATTTCAGAA
TCTGGACTTTGGCAAATGCTGCCTAAGGGCACTCGCTCAGTTTTGGTACAGCCAGTGGCTCAAAATCTAAACCAAAGTGGCAATGAGATGGAAAAGATTGGAGGGTTCAT
ATTGGTGGCTTCAAGTTTAAGTTATGCATTTAGTGATAAAGATAGAGCCTGGATAAGAGCTCTTGCTACCAAGTTTGATAATGGGGACCTATCGGGGGGAAGTGAGTAA

mRNA sequence

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ATTGCCAAACGGGGAAAGATAATGAGCTGCACAATTCTCTCTCCCGACCCGTTAATTCGGTTGTCATCCACTCACCGATTTCGCACTAAAAATGGGTCGAAGAGTCCATT
GATTACTGCTCGTCTTGACGATTCTAAGAACTCGCCCAATCGCCAACTCAATCTCTCTGTTCTTCGCTTCACACTTGGGATTCCTGGATTGGATGAGTCTTACTTACCCA
GATGGATTGGTTATGGATTTGGTTCGCTTCTGCTCTTGAATCACTTTGTTGGTTCGAATTCAGCTGCTCCCATCACCTCAGCACAGTTAAGAACTGAGGCTTTAGGCATT
TCCTTGGCTGCATTTTCTATTGCACTCCCCTACTTGGGAAAGTTTCTTGAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGGTGCCGAGCAAATATTTGTCTT
GTCACAAAGTGTATCGGATAATGTGAAGGATGACTTGGCTTGGGCAACATACATCTTGCTGCGCAATACAAACAGTATATCAGTGTTAATACAGATTCAAGGGGAGTTAT
GCGTTCGAGGATACTGGAATAGTCCAAATGATATATCAGGAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTATCTGCATTAAATGATGCCCTC
TATTTTCCTCAGATTTCAGAATCTGGACTTTGGCAAATGCTGCCTAAGGGCACTCGCTCAGTTTTGGTACAGCCAGTGGCTCAAAATCTAAACCAAAGTGGCAATGAGAT
GGAAAAGATTGGAGGGTTCATATTGGTGGCTTCAAGTTTAAGTTATGCATTTAGTGATAAAGATAGAGCCTGGATAAGAGCTCTTGCTACCAAGTTTGATAATGGGGACC
TATCGGGGGGAAGTGAGTAATAAATCTCCAATATATTTTTTGGTTATTGACGTGCCTTTCTCAGAAGTCATGAGCATGGTACTGATACTCATTTTTGCCAATAAAATAGA
GAATATTACTATTTTTTTAGTTCAACGATCTTATTGACGCCCATTTCTTAGAGCTCACTAAGCTTTGCATTGATTGACGTACAAAAATTACTTTTTGATGCAACTGTTTC
GAGCAAGACATGGAAAGAACAGAAACGTGACGCTGTGGATTTACTTAGAAACTTAGGAAAGGGATATAATCTCTATTTCAATGCCTTTTCTTATTTCTTCGGTCTTTGGG
CCAAAATCCATGAGAGGTGCTTGTAATTTTCCC

Protein sequence

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MSCTILSPDPLIRLSSTHRFRTKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEALGISLAAFSI
ALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDALYFPQISE
SGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGGSE

Carg26820 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome