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Carg26822 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26822
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr16:7688787..7689053
RNA-Seq ExpressionCarg26822
SyntenyCarg26822
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577526.1 hypothetical protein SDJN03_25100, partial [Cucurbita argyrosperma subsp. sororia]8.0e-36100Show/hide
Query:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPDHHLDAD
        MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPDHHLDAD
Subjt:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPDHHLDAD

KAG6596766.1 hypothetical protein SDJN03_09946, partial [Cucurbita argyrosperma subsp. sororia]2.5e-2175.86Show/hide
Query:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPDHHLDA
        MEIP KV +FRFH +AAL L L LFSL+LLAP+ LSL+A+FWPLLLSTALFLLAVLLF N SLP PDK  EGLLNYVAGH D  LDA
Subjt:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPDHHLDA

KAG7028299.1 hypothetical protein SDJN02_09480, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2177.01Show/hide
Query:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPDHHLDA
        MEIP KV KFRFH +AAL L L LFSL+LLAP+ LSL+A+FWPLLLSTALFLLAVLLF N SLP PDK  EGLLNYVAGH D  LDA
Subjt:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPDHHLDA

KGN56016.1 hypothetical protein Csa_010324 [Cucumis sativus]5.4e-2480.46Show/hide
Query:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPDHHLDA
        MEIP KV KFRFHI+  LILSL LFSL LLAP FLSLLA+FWPL LSTALFLLAVLLF NTSLP PDKAAEGLL+YVAGH  H LD+
Subjt:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPDHHLDA

XP_031404551.1 uncharacterized protein LOC116213666 [Punica granatum]1.4e-1664.63Show/hide
Query:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPD
        M IP  + K+R HI+ A+ILSL L  L+LLAP+F++LLA+FWPL LSTALFL+AV+ F  TS P PDKA EGLL+YVAG PD
Subjt:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPD

TrEMBL top hitse value%identityAlignment
A0A0A0L7E9 Uncharacterized protein2.6e-2480.46Show/hide
Query:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPDHHLDA
        MEIP KV KFRFHI+  LILSL LFSL LLAP FLSLLA+FWPL LSTALFLLAVLLF NTSLP PDKAAEGLL+YVAGH  H LD+
Subjt:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPDHHLDA

A0A218XLN4 uncharacterized protein LOC1162136666.9e-1764.63Show/hide
Query:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPD
        M IP  + K+R HI+ A+ILSL L  L+LLAP+F++LLA+FWPL LSTALFL+AV+ F  TS P PDKA EGLL+YVAG PD
Subjt:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPD

A0A314XNV4 Uncharacterized protein9.0e-1756.32Show/hide
Query:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPDHHLDA
        MEIP K+ KF+FH + ALIL L L+++ L+AP+FL++LA+FWPL LSTALFL AV++F  T+LP+ + + EGLL+YVAG P+H +++
Subjt:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPDHHLDA

A0A5E4FSR9 PREDICTED: transmembrane9.0e-1756.32Show/hide
Query:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPDHHLDA
        MEIP K+ KF+FH + ALIL L L+++ L+AP+FL++LA+FWPL LSTALFL AV++F  T+LP+ + + EGLL+YVAG P+H +++
Subjt:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPDHHLDA

M5WI68 Uncharacterized protein9.0e-1756.32Show/hide
Query:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPDHHLDA
        MEIP K+ KF+FH + ALIL L L+++ L+AP+FL++LA+FWPL LSTALFL AV++F  T+LP+ + + EGLL+YVAG P+H +++
Subjt:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPDHHLDA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13175.1 unknown protein6.1e-1044.55Show/hide
Query:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTS-LPLPDK-----------AAEGLLNYVAG--HPDHHLD
        ME   K+ KF+  IV A +LSL+  +L+  +P FL++L++FWPL LSTALFL AV  F  TS LP+              AAEG+L+YV G  H D   D
Subjt:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTS-LPLPDK-----------AAEGLLNYVAG--HPDHHLD

Query:  A
        +
Subjt:  A

AT4G16400.1 unknown protein4.0e-0940.24Show/hide
Query:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPD
        MEI  K+ ++RFH +  +++S+I+ SL+  AP+ L++LA+FWPL  STA FL   + F        +   E L++YVAG P+
Subjt:  MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTCCCAGGAAAGTAGCGAAGTTCAGATTCCACATTGTAGCAGCCCTAATCCTATCCCTAATTCTCTTCTCCCTCCTCCTCCTCGCCCCCAAATTCCTCTCCCT
CCTCGCCTTCTTCTGGCCTCTCCTCCTCTCCACCGCCCTCTTCCTTCTCGCCGTCCTCCTCTTCACCAACACCTCCCTTCCTCTGCCCGATAAAGCCGCCGAAGGCCTCC
TCAACTATGTCGCCGGCCACCCCGACCACCACCTCGACGCCGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTCCCAGGAAAGTAGCGAAGTTCAGATTCCACATTGTAGCAGCCCTAATCCTATCCCTAATTCTCTTCTCCCTCCTCCTCCTCGCCCCCAAATTCCTCTCCCT
CCTCGCCTTCTTCTGGCCTCTCCTCCTCTCCACCGCCCTCTTCCTTCTCGCCGTCCTCCTCTTCACCAACACCTCCCTTCCTCTGCCCGATAAAGCCGCCGAAGGCCTCC
TCAACTATGTCGCCGGCCACCCCGACCACCACCTCGACGCCGATTAA
Protein sequenceShow/hide protein sequence
MEIPRKVAKFRFHIVAALILSLILFSLLLLAPKFLSLLAFFWPLLLSTALFLLAVLLFTNTSLPLPDKAAEGLLNYVAGHPDHHLDAD