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Carg26847 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26847
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein RALF-like 4
Genome locationCarg_Chr11:8800178..8800534
RNA-Seq ExpressionCarg26847
SyntenyCarg26847
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588679.1 Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. sororia]2.0e-58100Show/hide
Query:  MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI
        MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI
Subjt:  MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI

Query:  NPYRRGCAAITGCARFTD
        NPYRRGCAAITGCARFTD
Subjt:  NPYRRGCAAITGCARFTD

XP_022927736.1 rapid alkalinization factor 23-like [Cucurbita moschata]7.1e-5696.61Show/hide
Query:  MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI
        MKI LVLLLVF  VAPLSFAFHEASHSSSLLDDNS+YSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI
Subjt:  MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI

Query:  NPYRRGCAAITGCARFTD
        NPYRRGCAAITGCARFTD
Subjt:  NPYRRGCAAITGCARFTD

XP_022989015.1 protein RALF-like 4 [Cucurbita maxima]8.2e-5288.98Show/hide
Query:  MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI
        MKICL LLLVFAVVAP S AFHE S+ SSL+DDNS+YSFFGGDSSE+MTEDSRRQLFQYGF YN EARKRFL+YYALSKNNIPCGRRG+SYYDCKKRRRI
Subjt:  MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI

Query:  NPYRRGCAAITGCARFTD
        NPYRRGCAAITGCARFTD
Subjt:  NPYRRGCAAITGCARFTD

XP_023530159.1 protein RALF-like 19 [Cucurbita pepo subsp. pepo]2.8e-5294.12Show/hide
Query:  MKICLVLLLV-FAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRR
        MKICLVLLLV FAVVAPLSFAFHE SHSSSLL DNS+YSFFGGDSSEAMTEDSRRQLFQYGF YN EARKR LSYYALSKNNIPCGRRGTSYYDCKKRRR
Subjt:  MKICLVLLLV-FAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRR

Query:  INPYRRGCAAITGCARFTD
        INPYRRGCAAITGCARFTD
Subjt:  INPYRRGCAAITGCARFTD

XP_023531888.1 protein RALF-like 4 [Cucurbita pepo subsp. pepo]1.1e-5188.98Show/hide
Query:  MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI
        MK+C+ LLLVF VV P SFAFHE SHSSSLLDD S+YSFFGGDSSEAMTED+RRQLFQYGF YN EARKR LSYYALSKNNIPCGRRGTSYYDCKKRRRI
Subjt:  MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI

Query:  NPYRRGCAAITGCARFTD
        NPYRRGCAAITGCARFTD
Subjt:  NPYRRGCAAITGCARFTD

TrEMBL top hitse value%identityAlignment
A0A6J1EI16 protein RALF-like 193.1e-4983.9Show/hide
Query:  MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI
        MK+ + +LLVF V  PLSFA HE S++SSL++DN+ YSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKR+LSYYAL +NNIPCGRRGTSYYDCKKRRRI
Subjt:  MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI

Query:  NPYRRGCAAITGCARFTD
        NPYRRGCAAITGCARFTD
Subjt:  NPYRRGCAAITGCARFTD

A0A6J1EIG3 rapid alkalinization factor 23-like3.5e-5696.61Show/hide
Query:  MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI
        MKI LVLLLVF  VAPLSFAFHEASHSSSLLDDNS+YSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI
Subjt:  MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI

Query:  NPYRRGCAAITGCARFTD
        NPYRRGCAAITGCARFTD
Subjt:  NPYRRGCAAITGCARFTD

A0A6J1JIT9 protein RALF-like 46.7e-5289.17Show/hide
Query:  MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSS--EAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRR
        MKICL LLLVFA+VAPLSFAFHE SH SSL+DDNSEYSFFGG SS  EAMTEDSRRQLF+YGF YN+EARKRFL+YYALSKNNIPCGRRG SYYDCKKRR
Subjt:  MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSS--EAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRR

Query:  RINPYRRGCAAITGCARFTD
        RINPYRRGCAAITGCARFTD
Subjt:  RINPYRRGCAAITGCARFTD

A0A6J1JL71 protein RALF-like 44.0e-5288.98Show/hide
Query:  MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI
        MKICL LLLVFAVVAP S AFHE S+ SSL+DDNS+YSFFGGDSSE+MTEDSRRQLFQYGF YN EARKRFL+YYALSKNNIPCGRRG+SYYDCKKRRRI
Subjt:  MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI

Query:  NPYRRGCAAITGCARFTD
        NPYRRGCAAITGCARFTD
Subjt:  NPYRRGCAAITGCARFTD

A0A6J1JN66 protein RALF-like 43.7e-5086.44Show/hide
Query:  MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI
        MK+ + LLLVF VV PLSFA HE S++SSL+DDNSEYSFFGGDSSEAMTEDSRRQLFQYGF YNKEARKR+LSYYAL +NNIPCGRRGTSYYDCKKRR I
Subjt:  MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI

Query:  NPYRRGCAAITGCARFTD
        NPYRRGCAAITGCARFTD
Subjt:  NPYRRGCAAITGCARFTD

SwissProt top hitse value%identityAlignment
Q6NME6 Protein RALF-like 199.2e-1443.44Show/hide
Query:  MKICLVL-LLVFAVVAPLSFAFHEASHS----SSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCK
        +KI L+L LL  AVVA  + A    + S       + ++ E  +         +E +RRQL          AR+ ++SY AL KNN+PC RRG SYYDCK
Subjt:  MKICLVL-LLVFAVVAPLSFAFHEASHS----SSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCK

Query:  KRRRINPYRRGCAAITGCARFT
        KR+R NPYRRGC+ IT C R T
Subjt:  KRRRINPYRRGCAAITGCARFT

Q8L9P8 Protein RALF-like 338.0e-1053.06Show/hide
Query:  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR
        A  +++SY AL +N +PC RRG SYY+C++  + NPY RGC+AIT C R
Subjt:  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR

Q945T0 Rapid alkalinization factor9.5e-1159.57Show/hide
Query:  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGC
        A K+++SY AL KN++PC RRG SYY+CK   + NPY RGC+AIT C
Subjt:  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGC

Q9FZA0 Protein RALF-like 45.9e-1342.86Show/hide
Query:  MKICLVL-LLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAM--TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR
        +K+ L+  LL+ A+VA    A +  + S      N +      D  E++  +E +RRQL +          +R++ Y AL KNN+PC RRG SYYDCKKR
Subjt:  MKICLVL-LLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAM--TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR

Query:  RRINPYRRGCAAITGCARF
        RR NPYRRGC+AIT C R+
Subjt:  RRINPYRRGCAAITGCARF

Q9LUS7 Rapid alkalinization factor 233.3e-1142.86Show/hide
Query:  SSLLDDNSEYSFFGGDSSEAMTEDS---RRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR
        S+ L D  +  + GG+  E    DS   RR L          A +R++SY AL +N IPC RRG SYY+C++  + NPY RGC+AIT C R
Subjt:  SSLLDDNSEYSFFGGDSSEAMTEDS---RRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR

Arabidopsis top hitse value%identityAlignment
AT1G28270.1 ralf-like 44.2e-1442.86Show/hide
Query:  MKICLVL-LLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAM--TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR
        +K+ L+  LL+ A+VA    A +  + S      N +      D  E++  +E +RRQL +          +R++ Y AL KNN+PC RRG SYYDCKKR
Subjt:  MKICLVL-LLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAM--TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR

Query:  RRINPYRRGCAAITGCARF
        RR NPYRRGC+AIT C R+
Subjt:  RRINPYRRGCAAITGCARF

AT2G33775.1 ralf-like 196.5e-1543.44Show/hide
Query:  MKICLVL-LLVFAVVAPLSFAFHEASHS----SSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCK
        +KI L+L LL  AVVA  + A    + S       + ++ E  +         +E +RRQL          AR+ ++SY AL KNN+PC RRG SYYDCK
Subjt:  MKICLVL-LLVFAVVAPLSFAFHEASHS----SSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCK

Query:  KRRRINPYRRGCAAITGCARFT
        KR+R NPYRRGC+ IT C R T
Subjt:  KRRRINPYRRGCAAITGCARFT

AT3G05490.1 ralf-like 222.8e-1031.58Show/hide
Query:  VFAVVAPLSFAFHEASHSSSLLD--------DNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRIN
        ++AV+A L+        +    D         +S +S   G  +E + E+   + F         A+K+++SY A+ +N++PC RRG SYY+C++  + N
Subjt:  VFAVVAPLSFAFHEASHSSSLLD--------DNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRIN

Query:  PYRRGCAAITGCAR
        PY RGC+ IT C R
Subjt:  PYRRGCAAITGCAR

AT3G16570.1 rapid alkalinization factor 232.3e-1242.86Show/hide
Query:  SSLLDDNSEYSFFGGDSSEAMTEDS---RRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR
        S+ L D  +  + GG+  E    DS   RR L          A +R++SY AL +N IPC RRG SYY+C++  + NPY RGC+AIT C R
Subjt:  SSLLDDNSEYSFFGGDSSEAMTEDS---RRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR

AT4G15800.1 ralf-like 335.7e-1153.06Show/hide
Query:  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR
        A  +++SY AL +N +PC RRG SYY+C++  + NPY RGC+AIT C R
Subjt:  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATCTGCCTCGTTCTCCTCCTCGTCTTTGCGGTCGTTGCTCCGCTCTCCTTTGCCTTCCATGAAGCCTCCCACAGTTCATCCCTCCTCGATGATAATTCTGAATA
TAGCTTCTTTGGCGGAGACTCCTCCGAAGCTATGACTGAAGATAGTCGACGACAACTTTTTCAATATGGATTCGTCTATAATAAGGAAGCTCGCAAGAGGTTTTTGAGCT
ACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTACCTCCTACTATGATTGCAAGAAGCGTAGAAGGATTAATCCTTATCGTCGCGGTTGCGCCGCCATC
ACTGGATGTGCTCGATTCACCGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATCTGCCTCGTTCTCCTCCTCGTCTTTGCGGTCGTTGCTCCGCTCTCCTTTGCCTTCCATGAAGCCTCCCACAGTTCATCCCTCCTCGATGATAATTCTGAATA
TAGCTTCTTTGGCGGAGACTCCTCCGAAGCTATGACTGAAGATAGTCGACGACAACTTTTTCAATATGGATTCGTCTATAATAAGGAAGCTCGCAAGAGGTTTTTGAGCT
ACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTACCTCCTACTATGATTGCAAGAAGCGTAGAAGGATTAATCCTTATCGTCGCGGTTGCGCCGCCATC
ACTGGATGTGCTCGATTCACCGATTAA
Protein sequenceShow/hide protein sequence
MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAI
TGCARFTD