| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7022471.1 DNA-directed RNA polymerases II, IV and V subunit 3 [Cucurbita argyrosperma subsp. argyrosperma] | 6.4e-190 | 100 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
Query: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Subjt: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Query: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
Subjt: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
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| XP_004138895.1 DNA-directed RNA polymerases II, IV and V subunit 3 [Cucumis sativus] | 2.1e-164 | 89.24 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSDSAAA GEALDT +GIIIVKLRRGQELRLRAIARKGIGK
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
Query: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEK +WVES PT+VFELD VTHQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGA
Subjt: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Query: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
Subjt: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
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| XP_008441761.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like [Cucumis melo] | 7.2e-165 | 89.24 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSDSAAA GEALDT +GIIIVKLRRGQELRLRAIARKGIGK
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
Query: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEK +WVES PT+VFELDPVTHQV+VV+PEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGA
Subjt: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Query: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
Subjt: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
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| XP_022147788.1 DNA-directed RNA polymerases II, IV and V subunit 3-like [Momordica charantia] | 8.8e-163 | 88.37 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
FCSVEFHLRAKCHSDQTLDV+SKDL SSDHTVVPVDF+DSAAA+GE LDT +GIIIVKLRRGQELRLRAIARKGIGK
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
Query: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
DHAKWSPAATVTFMYEPSIHINEDLMETLTLEE+ +WVES PT+VFE+DP THQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Subjt: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Query: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
Subjt: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
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| XP_022927752.1 DNA-directed RNA polymerases II, IV and V subunit 3-like [Cucurbita moschata] | 1.9e-170 | 92.73 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDT +GIIIVKLRRGQELRLRAIARKGIGK
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
Query: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Subjt: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Query: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
Subjt: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LHS1 RPOLD domain-containing protein | 1.0e-164 | 89.24 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSDSAAA GEALDT +GIIIVKLRRGQELRLRAIARKGIGK
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
Query: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEK +WVES PT+VFELD VTHQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGA
Subjt: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Query: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
Subjt: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
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| A0A1S3B3P9 LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like | 3.5e-165 | 89.24 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSDSAAA GEALDT +GIIIVKLRRGQELRLRAIARKGIGK
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
Query: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEK +WVES PT+VFELDPVTHQV+VV+PEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGA
Subjt: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Query: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
Subjt: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
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| A0A6J1D221 DNA-directed RNA polymerases II, IV and V subunit 3-like | 4.2e-163 | 88.37 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
FCSVEFHLRAKCHSDQTLDV+SKDL SSDHTVVPVDF+DSAAA+GE LDT +GIIIVKLRRGQELRLRAIARKGIGK
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
Query: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
DHAKWSPAATVTFMYEPSIHINEDLMETLTLEE+ +WVES PT+VFE+DP THQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Subjt: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Query: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
Subjt: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
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| A0A6J1ELW4 DNA-directed RNA polymerases II, IV and V subunit 3-like | 9.4e-171 | 92.73 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDT +GIIIVKLRRGQELRLRAIARKGIGK
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
Query: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Subjt: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Query: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
Subjt: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
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| A0A6J1JIE7 DNA-directed RNA polymerases II, IV and V subunit 3-like | 9.4e-171 | 92.73 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDT +GIIIVKLRRGQELRLRAIARKGIGK
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
Query: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Subjt: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Query: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
Subjt: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P97760 DNA-directed RNA polymerase II subunit RPB3 | 1.3e-44 | 37.26 | Show/hide |
Query: YQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Y P V+I EL ++ KF + +TD+++AN++RRV IAEVP IAID V+I+ NSSVL+DEFIAHRLGLIPLTS+ + +++SRDC + C CSV
Subjt: YQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Query: EFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGKDHAK
EF L +C+ DQT V+S+DL S+ V+PV T + + I+IVKLR+GQELRLRA A+KG GK+HAK
Subjt: EFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGKDHAK
Query: WSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKAS
W+P A V F Y+P ++ + + W +S +++ E D YD K + F + VES G+++
Subjt: WSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKAS
Query: QLILNAIDILKQKL
++L+A+ LK+KL
Subjt: QLILNAIDILKQKL
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| Q39211 DNA-directed RNA polymerases II, IV and V subunit 3 | 1.9e-144 | 76.45 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+GA+YQRFPK+KIREL+DDYAKFEL +TDVSMANALRRVMI+EVPT+AIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
FCSVEF L +KC +DQTLDV+S+DLYS+D TV PVDF+ ++ + + +GIIIVKLRRGQEL+LRAIARKGIGK
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
Query: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
DHAKWSPAATVTFMYEP I INED+M+TL+ EEK +ESSPTKVF +DPVT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I+ K+DSFIFTVESTGA
Subjt: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Query: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
+KASQL+LNAID+LKQKLDAVRLSDDTVEADDQFGELGAHMRGG
Subjt: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
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| Q39212 DNA-directed RNA polymerases IV and V subunit 3B | 1.7e-132 | 71.22 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G +YQRFP VKIREL+DDYAKFEL +TDVSMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD CE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
FCSVEF L AKC +DQTLDV+S+DLYS+D TV PVDF+ +++ + + +GIII KLRRGQEL+L+A+ARKGIGK
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
Query: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
DHAKWSPAATVT+MYEP I INE++M TLT EEK +ESSPTKVF +DPVT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I K DSF+FTVESTGA
Subjt: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Query: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
+KASQL+LNAIDILKQKLDA+RLSD+TVEADDQFGELGAHMR G
Subjt: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
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| Q3T0Q3 DNA-directed RNA polymerase II subunit RPB3 | 4.5e-45 | 37.58 | Show/hide |
Query: YQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Y P V+I EL D+ KF + +TD+++AN++RRV IAEVP IAID V+I+ NSSVL+DEFIAHRLGLIPLTS+ + +++SRDC + C CSV
Subjt: YQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Query: EFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGKDHAK
EF L +C+ DQT V+S+DL S+ V+PV T + + I+IVKLR+GQELRLRA A+KG GK+HAK
Subjt: EFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGKDHAK
Query: WSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKAS
W+P A V F Y+P ++ + + W +S +++ E D YD K + F + VES G+++
Subjt: WSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKAS
Query: QLILNAIDILKQKL
++L+A+ LK+KL
Subjt: QLILNAIDILKQKL
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| Q54DH7 DNA-directed RNA polymerase II subunit rpb3 | 2.7e-66 | 45.6 | Show/hide |
Query: RFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFH
R P+++I E+++D F L +TD+S+ANALRRVMIAEVPT+ IDLVE E N+SVL DEFIAHRLGLIPL S+ ++RDC D +C+ CSVE
Subjt: RFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFH
Query: LRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNG-RGIIIVKLRRGQELRLRAIARKGIGKDHAKWS
L KC ++ DV+S DL S + V+PV +S + +N + I IVKLRRGQE++LRAIA+KG+GK+HAKWS
Subjt: LRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNG-RGIIIVKLRRGQELRLRAIARKGIGKDHAKWS
Query: PAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDP--VTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKAS
P+ T+ ++P I +N++ ++ LT ++K WV S PTKV+ P T QV + DP Y E KKAE+ GK LV + K+D FIFTVES+GA+K
Subjt: PAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDP--VTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKAS
Query: QLILNAIDILKQKLDAVR
++L AI I+K+KL ++
Subjt: QLILNAIDILKQKLDAVR
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G60850.1 DNA-directed RNA polymerase family protein | 2.8e-26 | 29.34 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
G Y F KV + L +F++ D + ANA RR++IAEVP++AI+ V I N+SV+ DE +AHR+GLIP+ ++ + S + D E
Subjt: GASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQ-TLDVSSKDL-----------YSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRL
++ F L KC ++ L V + DL S + T P ++ S + + ++L + C + I+I KL GQE+ L
Subjt: SVEFHLRAKCHSDQ-TLDVSSKDL-----------YSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRL
Query: RAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPV---THQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAK
A A KGIGK HAKWSP T + P + + ++ + L V P VF+++ + + V P T E ++ + + VD+ +
Subjt: RAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPV---THQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAK
Query: EDSFIFTVESTGAIKASQLILNAIDILKQKLDAV
++ FIF +ESTG++ L A+ IL+ K +A+
Subjt: EDSFIFTVESTGAIKASQLILNAIDILKQKLDAV
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| AT1G60850.2 DNA-directed RNA polymerase family protein | 2.8e-26 | 29.34 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
G Y F KV + L +F++ D + ANA RR++IAEVP++AI+ V I N+SV+ DE +AHR+GLIP+ ++ + S + D E
Subjt: GASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQ-TLDVSSKDL-----------YSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRL
++ F L KC ++ L V + DL S + T P ++ S + + ++L + C + I+I KL GQE+ L
Subjt: SVEFHLRAKCHSDQ-TLDVSSKDL-----------YSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRL
Query: RAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPV---THQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAK
A A KGIGK HAKWSP T + P + + ++ + L V P VF+++ + + V P T E ++ + + VD+ +
Subjt: RAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPV---THQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAK
Query: EDSFIFTVESTGAIKASQLILNAIDILKQKLDAV
++ FIF +ESTG++ L A+ IL+ K +A+
Subjt: EDSFIFTVESTGAIKASQLILNAIDILKQKLDAV
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| AT2G15400.1 DNA-directed RNA polymerase family protein | 1.2e-133 | 71.22 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G +YQRFP VKIREL+DDYAKFEL +TDVSMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD CE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
FCSVEF L AKC +DQTLDV+S+DLYS+D TV PVDF+ +++ + + +GIII KLRRGQEL+L+A+ARKGIGK
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
Query: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
DHAKWSPAATVT+MYEP I INE++M TLT EEK +ESSPTKVF +DPVT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I K DSF+FTVESTGA
Subjt: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Query: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
+KASQL+LNAIDILKQKLDA+RLSD+TVEADDQFGELGAHMR G
Subjt: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
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| AT2G15400.2 DNA-directed RNA polymerase family protein | 1.4e-89 | 66.67 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G +YQRFP VKIREL+DDYAKFEL +TDVSMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD CE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
FCSVEF L AKC +DQTLDV+S+DLYS+D TV PVDF+ +++ + + +GIII KLRRGQEL+L+A+ARKGIGK
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
Query: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQV
DHAKWSPAATVT+MYEP I INE++M TLT EEK +ESSPTKVF +DPVT QV
Subjt: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQV
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| AT2G15430.1 DNA-directed RNA polymerase family protein | 1.4e-145 | 76.45 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+GA+YQRFPK+KIREL+DDYAKFEL +TDVSMANALRRVMI+EVPT+AIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
FCSVEF L +KC +DQTLDV+S+DLYS+D TV PVDF+ ++ + + +GIIIVKLRRGQEL+LRAIARKGIGK
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTNWVDLFVVCTVKYATTSAIRFTNGRGIIIVKLRRGQELRLRAIARKGIGK
Query: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
DHAKWSPAATVTFMYEP I INED+M+TL+ EEK +ESSPTKVF +DPVT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I+ K+DSFIFTVESTGA
Subjt: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Query: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
+KASQL+LNAID+LKQKLDAVRLSDDTVEADDQFGELGAHMRGG
Subjt: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
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