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Carg26879 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26879
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGDT1 family protein
Genome locationCarg_Chr15:4955305..4955644
RNA-Seq ExpressionCarg26879
SyntenyCarg26879
Gene Ontology termsGO:0032468 - Golgi calcium ion homeostasis (biological process)
GO:0032472 - Golgi calcium ion transport (biological process)
GO:0070588 - calcium ion transmembrane transport (biological process)
GO:0071421 - manganese ion transmembrane transport (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005384 - manganese ion transmembrane transporter activity (molecular function)
GO:0015085 - calcium ion transmembrane transporter activity (molecular function)
InterPro domainsIPR001727 - Gdt1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016715.1 GDT1-like protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-32100Show/hide
Query:  MIIVLDVNGKQHSYLPVFLVGSVTNNFPFRGQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
        MIIVLDVNGKQHSYLPVFLVGSVTNNFPFRGQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
Subjt:  MIIVLDVNGKQHSYLPVFLVGSVTNNFPFRGQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
KAG7032513.1 GDT1-like protein 4 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-1497.87Show/hide
Query:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
        GQALCTTAAVLGGRSLASQISEKIVALSGG+LFIVFGIQSFLSTVEP
Subjt:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
XP_022938546.1 GDT1-like protein 4 [Cucurbita moschata]1.2e-14100Show/hide
Query:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
        GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
Subjt:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
XP_022994046.1 GDT1-like protein 4 [Cucurbita maxima]1.2e-14100Show/hide
Query:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
        GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
Subjt:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
XP_023551269.1 GDT1-like protein 4 [Cucurbita pepo subsp. pepo]1.2e-14100Show/hide
Query:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
        GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
Subjt:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
TrEMBL top hitse value%identityAlignment
A0A6J1CDK4 GDT1 family protein2.1e-1495.74Show/hide
Query:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
        GQALCTTAAV+GGRSLASQISEKIVALSGGVLFIVFGIQSFLSTV+P
Subjt:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
A0A6J1FDG2 GDT1 family protein5.6e-15100Show/hide
Query:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
        GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
Subjt:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
A0A6J1HLC7 GDT1 family protein7.3e-1597.87Show/hide
Query:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
        GQALCTTAAVLGGRSLASQISEKIVALSGG+LFIVFGIQSFLSTVEP
Subjt:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
A0A6J1I9I8 GDT1 family protein1.3e-1497.87Show/hide
Query:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
        GQALCTTAAVLGGRSLASQISEKIVALSGG+LFIVFGIQSFLSTVEP
Subjt:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
A0A6J1JY15 GDT1 family protein5.6e-15100Show/hide
Query:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
        GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
Subjt:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP
SwissProt top hitse value%identityAlignment
A2ZE50 GDT1-like protein 33.3e-0451.22Show/hide
Query:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSF
        G  +CT+ AV+GG  LAS+IS++ VA  GGVLF+ F + S+
Subjt:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSF
B9G125 GDT1-like protein 58.1e-1175.56Show/hide
Query:  QALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVE
        QALCTTAAV+GG+SLASQISEK+V LS GVLF++FGI S+LS  E
Subjt:  QALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVE
Q2R4J1 GDT1-like protein 33.3e-0451.22Show/hide
Query:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSF
        G  +CT+ AV+GG  LAS+IS++ VA  GGVLF+ F + S+
Subjt:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSF
Q9C6M1 GDT1-like protein 41.1e-1280Show/hide
Query:  QALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVE
        Q LCTTAAV+GG+SLASQISE+IVALSGG+LFI+FGIQS+L++VE
Subjt:  QALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVE
Q9SX28 GDT1-like protein 53.3e-1280Show/hide
Query:  QALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVE
        Q LCTTAAVLGG+SLASQISE+IVALSGG+LFI+FGIQS L+ V+
Subjt:  QALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVE
Arabidopsis top hitse value%identityAlignment
AT1G25520.1 Uncharacterized protein family (UPF0016)8.0e-1480Show/hide
Query:  QALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVE
        Q LCTTAAV+GG+SLASQISE+IVALSGG+LFI+FGIQS+L++VE
Subjt:  QALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVE
AT1G68650.1 Uncharacterized protein family (UPF0016)2.3e-1380Show/hide
Query:  QALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVE
        Q LCTTAAVLGG+SLASQISE+IVALSGG+LFI+FGIQS L+ V+
Subjt:  QALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVE
AT5G36290.1 Uncharacterized protein family (UPF0016)6.8e-0548.78Show/hide
Query:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSF
        G  +CT+ AV+GG  LAS+IS++ VA  GG+LF+ F + S+
Subjt:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSF
AT5G36290.2 Uncharacterized protein family (UPF0016)6.8e-0548.78Show/hide
Query:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSF
        G  +CT+ AV+GG  LAS+IS++ VA  GG+LF+ F + S+
Subjt:  GQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAATCGTATTGGATGTGAATGGAAAACAACACAGTTACCTACCTGTTTTTCTAGTTGGAAGTGTCACTAATAACTTTCCTTTCAGGGGACAGGCATTGTGTACAAC
TGCTGCAGTCCTTGGAGGAAGGAGCTTGGCGTCACAAATCTCTGAGAAAATTGTTGCTCTCTCAGGTGGGGTTCTGTTCATTGTTTTTGGAATCCAGTCGTTCCTCTCAA
CTGTCGAGCCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAATCGTATTGGATGTGAATGGAAAACAACACAGTTACCTACCTGTTTTTCTAGTTGGAAGTGTCACTAATAACTTTCCTTTCAGGGGACAGGCATTGTGTACAAC
TGCTGCAGTCCTTGGAGGAAGGAGCTTGGCGTCACAAATCTCTGAGAAAATTGTTGCTCTCTCAGGTGGGGTTCTGTTCATTGTTTTTGGAATCCAGTCGTTCCTCTCAA
CTGTCGAGCCGTAA
Protein sequenceShow/hide protein sequence
MIIVLDVNGKQHSYLPVFLVGSVTNNFPFRGQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVEP