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Carg26896 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26896
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLate embryogenesis abundant protein family protein
Genome locationCarg_Chr05:5522532..5523193
RNA-Seq ExpressionCarg26896
SyntenyCarg26896
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598970.1 hypothetical protein SDJN03_08748, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3597.7Show/hide
Query:  MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKNRS
        MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAK+AMEAAKDSAHRAKDTVVETT+DSKQFVKANAKTVEKCMNTKNRS
Subjt:  MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKNRS

KAG7029929.1 hypothetical protein SDJN02_08272 [Cucurbita argyrosperma subsp. argyrosperma]4.6e-36100Show/hide
Query:  MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKNRS
        MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKNRS
Subjt:  MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKNRS

XP_022933143.1 uncharacterized protein At4g13230 [Cucurbita moschata]2.3e-3597.7Show/hide
Query:  MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKNRS
        MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAK+AMEAAKDSAHRAKDTVVETT+DSKQFVKANAKTVEKCMNTKNRS
Subjt:  MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKNRS

XP_022973925.1 uncharacterized protein At4g13230 [Cucurbita maxima]2.2e-3395.4Show/hide
Query:  MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKNRS
        MT GE MMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKD+VVETT+DSKQFVKANAKTVEKCMNTKNRS
Subjt:  MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKNRS

XP_023546410.1 uncharacterized protein At4g13230 [Cucurbita pepo subsp. pepo]2.3e-3597.7Show/hide
Query:  MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKNRS
        MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAK+AMEAAKDSAHRAKDTVVETT+DSKQFVKANAKTVEKCMNTKNRS
Subjt:  MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKNRS

TrEMBL top hitse value%identityAlignment
A0A2N9J2L7 Uncharacterized protein2.3e-1258.54Show/hide
Query:  MQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQ-AMEA---AKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKN
        +++KA+STAEHV++KT+DMAGM+SA AQ+V+ KAKQ A EA   AKD+A +AKDTV+    +SK+ +K NA+TV++ MNTKN
Subjt:  MQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQ-AMEA---AKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKN

A0A5N6QS64 Uncharacterized protein4.3e-1154.88Show/hide
Query:  MQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQ----AMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKN
        ++DKA+STAEHV++KT+DMAG +SA AQ+ + KAKQ    A + AKD+A +AKDTV+     SK  +K NA+TV++ MNTKN
Subjt:  MQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQ----AMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKN

A0A6J1CSM2 uncharacterized protein At4g13230-like6.8e-1766.28Show/hide
Query:  MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKNR
        M PGE MM + AYSTA+HV EK  DM GM+ +   E+S KAKQ MEAA DSA RAKDTVVE T++SK+FVKANA++V+K MNTKNR
Subjt:  MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKNR

A0A6J1F3W7 uncharacterized protein At4g132301.1e-3597.7Show/hide
Query:  MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKNRS
        MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAK+AMEAAKDSAHRAKDTVVETT+DSKQFVKANAKTVEKCMNTKNRS
Subjt:  MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKNRS

A0A6J1ICL4 uncharacterized protein At4g132301.0e-3395.4Show/hide
Query:  MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKNRS
        MT GE MMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKD+VVETT+DSKQFVKANAKTVEKCMNTKNRS
Subjt:  MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKNRS

SwissProt top hitse value%identityAlignment
Q8LFD5 Uncharacterized protein At4g132309.8e-0541.25Show/hide
Query:  DKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAA----KDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKN
        DKA    + V++K  + A  +S  A  +  KAK   E A    KD+  + KDTV   T ++K+ +KA AKTVE+ MNTKN
Subjt:  DKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAA----KDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKN

Arabidopsis top hitse value%identityAlignment
AT4G13230.1 Late embryogenesis abundant protein (LEA) family protein6.9e-0641.25Show/hide
Query:  DKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAA----KDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKN
        DKA    + V++K  + A  +S  A  +  KAK   E A    KD+  + KDTV   T ++K+ +KA AKTVE+ MNTKN
Subjt:  DKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAA----KDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCCTGGTGAACATATGATGCAGGACAAGGCTTACTCTACTGCAGAACATGTGAGTGAGAAGACAAGGGATATGGCAGGGATGCTGAGTGCAAGAGCGCAAGAGGT
ATCAGCAAAGGCAAAGCAGGCAATGGAAGCAGCAAAGGACTCAGCCCATAGGGCAAAGGACACAGTGGTTGAGACTACCAGAGACTCCAAGCAATTTGTCAAAGCCAATG
CAAAGACTGTTGAGAAGTGCATGAACACCAAGAACCGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
CATTTTGGGGCAGCAGCCATTGCAAGGAGATCACCCACTTCCAACACTTCCCTCCTTTTCGCTTCCAACCCCAAATTTATTCACGTAAACAAATCCACCACAAGATGGGT
CAGAAGCCAAAGATGCCATAAACCCGGAGGCAAATGAAGGAATGACGCCTGGTGAACATATGATGCAGGACAAGGCTTACTCTACTGCAGAACATGTGAGTGAGAAGACA
AGGGATATGGCAGGGATGCTGAGTGCAAGAGCGCAAGAGGTATCAGCAAAGGCAAAGCAGGCAATGGAAGCAGCAAAGGACTCAGCCCATAGGGCAAAGGACACAGTGGT
TGAGACTACCAGAGACTCCAAGCAATTTGTCAAAGCCAATGCAAAGACTGTTGAGAAGTGCATGAACACCAAGAACCGTTCTTAATTTCCCCTTCTTTCTTTCTTTTTTT
TTTTT
Protein sequenceShow/hide protein sequence
MTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEAAKDSAHRAKDTVVETTRDSKQFVKANAKTVEKCMNTKNRS