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Carg26950 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26950
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr11:3676327..3681783
RNA-Seq ExpressionCarg26950
SyntenyCarg26950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022020.1 hypothetical protein SDJN02_15749, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-235100Show/hide
Query:  MTNQVLRNQTENLPGSFLVLEHIVCHNITKLQHPVNTYTRERQLMRDSSYVLLTEEAIICEANHNLQMIVSASLESGVGSLDGCASDVVKQMSFQFLEKS
        MTNQVLRNQTENLPGSFLVLEHIVCHNITKLQHPVNTYTRERQLMRDSSYVLLTEEAIICEANHNLQMIVSASLESGVGSLDGCASDVVKQMSFQFLEKS
Subjt:  MTNQVLRNQTENLPGSFLVLEHIVCHNITKLQHPVNTYTRERQLMRDSSYVLLTEEAIICEANHNLQMIVSASLESGVGSLDGCASDVVKQMSFQFLEKS

Query:  EDFRVVFVGLPPSRLTQAGNLEIMSGQNERGVRSSCALFSWPVENVDYSVRWLSDIETDKNKRHEHGSLWIVVSNDQNRAIISGREIDGFQIRVYIHRAQ
        EDFRVVFVGLPPSRLTQAGNLEIMSGQNERGVRSSCALFSWPVENVDYSVRWLSDIETDKNKRHEHGSLWIVVSNDQNRAIISGREIDGFQIRVYIHRAQ
Subjt:  EDFRVVFVGLPPSRLTQAGNLEIMSGQNERGVRSSCALFSWPVENVDYSVRWLSDIETDKNKRHEHGSLWIVVSNDQNRAIISGREIDGFQIRVYIHRAQ

Query:  TIRFNRKFSMSMLDRPGTGMRVTGPWIDIEESPFLHILGAWRLLVNRCFLPFGEGSSPRWGLWMVSDAECVFACGVFPPSIAQPHCYKTYHRMEPIINSS
        TIRFNRKFSMSMLDRPGTGMRVTGPWIDIEESPFLHILGAWRLLVNRCFLPFGEGSSPRWGLWMVSDAECVFACGVFPPSIAQPHCYKTYHRMEPIINSS
Subjt:  TIRFNRKFSMSMLDRPGTGMRVTGPWIDIEESPFLHILGAWRLLVNRCFLPFGEGSSPRWGLWMVSDAECVFACGVFPPSIAQPHCYKTYHRMEPIINSS

Query:  GLLPGSLSNYQSTCVSAEYEQLKIYTSGFSSSITSEVHISPKSLGELGDYIYGADSHPLSPLSICRDEKEVVSPRIKNPSKEFLRVQIRRAELYHMLTKW
        GLLPGSLSNYQSTCVSAEYEQLKIYTSGFSSSITSEVHISPKSLGELGDYIYGADSHPLSPLSICRDEKEVVSPRIKNPSKEFLRVQIRRAELYHMLTKW
Subjt:  GLLPGSLSNYQSTCVSAEYEQLKIYTSGFSSSITSEVHISPKSLGELGDYIYGADSHPLSPLSICRDEKEVVSPRIKNPSKEFLRVQIRRAELYHMLTKW
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAACCAAGTACTTCGAAATCAGACTGAGAATCTGCCTGGGTCATTTTTAGTCCTGGAACATATTGTTTGTCACAACATCACTAAACTACAGCATCCAGTGAACAC
TTACACCCGAGAGAGGCAACTGATGAGAGATAGTTCATATGTTCTGCTAACTGAGGAGGCAATAATTTGTGAAGCCAATCATAATCTGCAAATGATTGTTTCAGCCTCAT
TGGAATCCGGGGTAGGTTCACTGGATGGTTGTGCTAGTGATGTTGTGAAACAAATGAGTTTCCAGTTCCTGGAAAAGTCTGAGGACTTTCGTGTGGTATTTGTGGGTTTG
CCCCCATCACGTCTTACTCAAGCAGGAAACCTTGAAATAATGAGTGGTCAAAATGAGAGGGGTGTTCGGAGCTCATGTGCTTTGTTTTCGTGGCCGGTGGAAAATGTAGA
TTATAGTGTGAGGTGGTTGTCGGACATAGAGACTGATAAAAATAAACGTCACGAGCATGGCAGTCTTTGGATTGTGGTCTCAAATGACCAGAATCGAGCCATAATCAGTG
GCCGAGAAATTGATGGCTTTCAAATCCGAGTTTACATCCACCGAGCTCAAACAATTCGCTTTAACAGGAAGTTTAGTATGTCTATGTTGGATCGTCCTGGGACTGGGATG
AGAGTGACAGGGCCGTGGATTGACATTGAAGAGTCTCCCTTTTTGCATATTTTGGGAGCTTGGAGACTTCTTGTGAATCGATGTTTTTTACCATTTGGGGAGGGTAGCAG
TCCGAGGTGGGGTCTATGGATGGTTTCTGATGCAGAATGCGTGTTTGCCTGTGGGGTTTTCCCTCCTTCGATAGCTCAACCCCACTGTTACAAAACATACCATAGGATGG
AGCCAATCATAAACTCCAGTGGTCTTCTTCCTGGAAGTTTGTCAAATTACCAAAGCACCTGTGTCTCGGCAGAATATGAGCAGTTGAAAATCTATACAAGTGGATTTTCT
TCATCAATTACTTCCGAAGTCCATATATCTCCTAAATCTCTCGGGGAGCTAGGAGACTACATATATGGTGCAGACAGCCACCCTCTTTCGCCACTGTCGATTTGTCGGGA
TGAGAAAGAAGTGGTATCTCCTCGAATCAAGAATCCATCAAAGGAGTTTCTAAGAGTGCAGATACGAAGAGCTGAACTATATCACATGTTGACCAAATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTAACCAAGTACTTCGAAATCAGACTGAGAATCTGCCTGGGTCATTTTTAGTCCTGGAACATATTGTTTGTCACAACATCACTAAACTACAGCATCCAGTGAACAC
TTACACCCGAGAGAGGCAACTGATGAGAGATAGTTCATATGTTCTGCTAACTGAGGAGGCAATAATTTGTGAAGCCAATCATAATCTGCAAATGATTGTTTCAGCCTCAT
TGGAATCCGGGGTAGGTTCACTGGATGGTTGTGCTAGTGATGTTGTGAAACAAATGAGTTTCCAGTTCCTGGAAAAGTCTGAGGACTTTCGTGTGGTATTTGTGGGTTTG
CCCCCATCACGTCTTACTCAAGCAGGAAACCTTGAAATAATGAGTGGTCAAAATGAGAGGGGTGTTCGGAGCTCATGTGCTTTGTTTTCGTGGCCGGTGGAAAATGTAGA
TTATAGTGTGAGGTGGTTGTCGGACATAGAGACTGATAAAAATAAACGTCACGAGCATGGCAGTCTTTGGATTGTGGTCTCAAATGACCAGAATCGAGCCATAATCAGTG
GCCGAGAAATTGATGGCTTTCAAATCCGAGTTTACATCCACCGAGCTCAAACAATTCGCTTTAACAGGAAGTTTAGTATGTCTATGTTGGATCGTCCTGGGACTGGGATG
AGAGTGACAGGGCCGTGGATTGACATTGAAGAGTCTCCCTTTTTGCATATTTTGGGAGCTTGGAGACTTCTTGTGAATCGATGTTTTTTACCATTTGGGGAGGGTAGCAG
TCCGAGGTGGGGTCTATGGATGGTTTCTGATGCAGAATGCGTGTTTGCCTGTGGGGTTTTCCCTCCTTCGATAGCTCAACCCCACTGTTACAAAACATACCATAGGATGG
AGCCAATCATAAACTCCAGTGGTCTTCTTCCTGGAAGTTTGTCAAATTACCAAAGCACCTGTGTCTCGGCAGAATATGAGCAGTTGAAAATCTATACAAGTGGATTTTCT
TCATCAATTACTTCCGAAGTCCATATATCTCCTAAATCTCTCGGGGAGCTAGGAGACTACATATATGGTGCAGACAGCCACCCTCTTTCGCCACTGTCGATTTGTCGGGA
TGAGAAAGAAGTGGTATCTCCTCGAATCAAGAATCCATCAAAGGAGTTTCTAAGAGTGCAGATACGAAGAGCTGAACTATATCACATGTTGACCAAATGGTGA
Protein sequenceShow/hide protein sequence
MTNQVLRNQTENLPGSFLVLEHIVCHNITKLQHPVNTYTRERQLMRDSSYVLLTEEAIICEANHNLQMIVSASLESGVGSLDGCASDVVKQMSFQFLEKSEDFRVVFVGL
PPSRLTQAGNLEIMSGQNERGVRSSCALFSWPVENVDYSVRWLSDIETDKNKRHEHGSLWIVVSNDQNRAIISGREIDGFQIRVYIHRAQTIRFNRKFSMSMLDRPGTGM
RVTGPWIDIEESPFLHILGAWRLLVNRCFLPFGEGSSPRWGLWMVSDAECVFACGVFPPSIAQPHCYKTYHRMEPIINSSGLLPGSLSNYQSTCVSAEYEQLKIYTSGFS
SSITSEVHISPKSLGELGDYIYGADSHPLSPLSICRDEKEVVSPRIKNPSKEFLRVQIRRAELYHMLTKW