; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg26961 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26961
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionStructure-specific endonuclease subunit SLX1 homolog
Genome locationCarg_Chr13:70957..73241
RNA-Seq ExpressionCarg26961
SyntenyCarg26961
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0051569 - regulation of histone H3-K4 methylation (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016593 - Cdc73/Paf1 complex (cellular component)
GO:0033557 - Slx1-Slx4 complex (cellular component)
GO:0000993 - RNA polymerase II complex binding (molecular function)
GO:0008821 - crossover junction endodeoxyribonuclease activity (molecular function)
GO:0017108 - 5'-flap endonuclease activity (molecular function)
InterPro domainsIPR000305 - GIY-YIG endonuclease
IPR027520 - Structure-specific endonuclease subunit Slx1
IPR035901 - GIY-YIG endonuclease superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583322.1 Structure-specific endonuclease subunit SLX1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-22599.48Show/hide
Query:  MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA
        MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA
Subjt:  MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA

Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW
        LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW

Query:  EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID
        EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID
Subjt:  EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID

Query:  DGEENHLEGSGTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVITGRSEIIDLTKSPTFIQL
        DGEENHLEGSGTKLQQQP RKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVITGRSEIIDLTKSPTF+QL
Subjt:  DGEENHLEGSGTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVITGRSEIIDLTKSPTFIQL

KAG7019098.1 Structure-specific endonuclease subunit SLX1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-226100Show/hide
Query:  MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA
        MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA
Subjt:  MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA

Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW
        LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW

Query:  EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID
        EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID
Subjt:  EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID

Query:  DGEENHLEGSGTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVITGRSEIIDLTKSPTFIQL
        DGEENHLEGSGTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVITGRSEIIDLTKSPTFIQL
Subjt:  DGEENHLEGSGTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVITGRSEIIDLTKSPTFIQL

XP_022964936.1 structure-specific endonuclease subunit SLX1 homolog isoform X1 [Cucurbita moschata]6.0e-21398.37Show/hide
Query:  MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA
        MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNE N FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA
Subjt:  MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA

Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW
        LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENE+DW
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW

Query:  EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID
        EYNREY+EVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQ+PHSSCTPSYIDVSVSYDLRGCDEQ+PALCAQPCIVEGRTEIIID
Subjt:  EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID

Query:  DGEENHLEGSGTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVIT
        DGEENHLEGSGTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVIT
Subjt:  DGEENHLEGSGTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVIT

XP_022964938.1 structure-specific endonuclease subunit SLX1 homolog isoform X2 [Cucurbita moschata]6.0e-21398.37Show/hide
Query:  MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA
        MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNE N FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA
Subjt:  MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA

Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW
        LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENE+DW
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW

Query:  EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID
        EYNREY+EVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQ+PHSSCTPSYIDVSVSYDLRGCDEQ+PALCAQPCIVEGRTEIIID
Subjt:  EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID

Query:  DGEENHLEGSGTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVIT
        DGEENHLEGSGTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVIT
Subjt:  DGEENHLEGSGTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVIT

XP_023519404.1 uncharacterized protein LOC111782823 isoform X2 [Cucurbita pepo subsp. pepo]3.9e-20495.11Show/hide
Query:  MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA
        MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNE NGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA
Subjt:  MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA

Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW
        LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCY EGDR VLENEDDW
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW

Query:  EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID
        EYNREYEE C S+V+ LMTEVPNEIPQ LMDYQTGTDGRPHELRGSDEELEDNEQ+PHSSCTPSYIDV VSY+LRGCDEQ+P LCAQPCIVEGRTEIIID
Subjt:  EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID

Query:  DGEENHLEGSGTKLQQQPGR-KNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVIT
        DGEEN LEGSG KLQQQPGR KNLSGIATEIS+VSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVIT
Subjt:  DGEENHLEGSGTKLQQQPGR-KNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVIT

TrEMBL top hitse value%identityAlignment
A0A1S3C574 Structure-specific endonuclease subunit SLX1 homolog6.0e-17478.8Show/hide
Query:  MRRRKEKPEIPKTMAVA---EEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTN
        MR+RKEKPEI KTMA     EEK++DDE+EERGN  NGFFSCYLLASACPR+KGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMV CIYGFPTN
Subjt:  MRRRKEKPEIPKTMAVA---EEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSG+ANK+KLAYTMLTLPAWC LNITVNYFSTK+M NAAGCPSLP HM+VQVSPIDELPCYSEGD+ VLENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENE

Query:  DDWEYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHE-LRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGC------DEQKPALCAQPCI
        DDWEY+RE EE+C  QV+  M EV NE+PQ LMDYQTGTDGRP   LRG D+ELE NEQ+P SSCTPSY+DV +SYDL  C      DE++ A C Q C 
Subjt:  DDWEYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHE-LRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGC------DEQKPALCAQPCI

Query:  VEG--RTEIIIDDGEENHLEGSGTKLQQQPGRKNL-SGIATEISEV---SYGL-PPVENEVIDVSTPSPDCRTSSYKFKRRVITGRSEIIDLTKSPTFIQ
        V G  RTEIIIDDGEEN  EGSG  LQ+QPGRKNL SGIA+EIS+V   S GL P VE EVIDVSTPSPDCRTSS++FKRRV +G+SE+IDLTKSPTFIQ
Subjt:  VEG--RTEIIIDDGEENHLEGSGTKLQQQPGRKNL-SGIATEISEV---SYGL-PPVENEVIDVSTPSPDCRTSSYKFKRRVITGRSEIIDLTKSPTFIQ

Query:  L
        L
Subjt:  L

A0A6J1HKB9 Structure-specific endonuclease subunit SLX1 homolog2.9e-21398.37Show/hide
Query:  MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA
        MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNE N FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA
Subjt:  MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA

Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW
        LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENE+DW
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW

Query:  EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID
        EYNREY+EVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQ+PHSSCTPSYIDVSVSYDLRGCDEQ+PALCAQPCIVEGRTEIIID
Subjt:  EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID

Query:  DGEENHLEGSGTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVIT
        DGEENHLEGSGTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVIT
Subjt:  DGEENHLEGSGTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVIT

A0A6J1HMD6 Structure-specific endonuclease subunit SLX1 homolog2.9e-21398.37Show/hide
Query:  MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA
        MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNE N FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA
Subjt:  MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA

Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW
        LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENE+DW
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW

Query:  EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID
        EYNREY+EVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQ+PHSSCTPSYIDVSVSYDLRGCDEQ+PALCAQPCIVEGRTEIIID
Subjt:  EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID

Query:  DGEENHLEGSGTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVIT
        DGEENHLEGSGTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVIT
Subjt:  DGEENHLEGSGTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVIT

A0A6J1HZQ2 Structure-specific endonuclease subunit SLX1 homolog2.1e-20394.29Show/hide
Query:  MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA
        MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNE NGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA
Subjt:  MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA

Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW
        LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQ+SPIDELPCYSEGDRCVLENE+DW
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW

Query:  EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID
        EYN+EYEEVC SQVH LMTEVPNEIPQTLMDY TGTDGRPHELRGSDEEL+DNEQ+PHSSCTPSYIDV VSYDLRGCDEQ+PALCAQPC VEG TEIIID
Subjt:  EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID

Query:  DGEENHLEGSGTKLQQQPGR-KNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVIT
        DGEEN LEGSG KLQQQPGR KNLSGIATEIS+VSYGLPPVE EVIDVSTPSP CRTSS+KFKRR+IT
Subjt:  DGEENHLEGSGTKLQQQPGR-KNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVIT

A0A6J1I681 Structure-specific endonuclease subunit SLX1 homolog2.1e-20394.29Show/hide
Query:  MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA
        MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNE NGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA
Subjt:  MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSA

Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW
        LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQ+SPIDELPCYSEGDRCVLENE+DW
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDW

Query:  EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID
        EYN+EYEEVC SQVH LMTEVPNEIPQTLMDY TGTDGRPHELRGSDEEL+DNEQ+PHSSCTPSYIDV VSYDLRGCDEQ+PALCAQPC VEG TEIIID
Subjt:  EYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIID

Query:  DGEENHLEGSGTKLQQQPGR-KNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVIT
        DGEEN LEGSG KLQQQPGR KNLSGIATEIS+VSYGLPPVE EVIDVSTPSP CRTSS+KFKRR+IT
Subjt:  DGEENHLEGSGTKLQQQPGR-KNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVIT

SwissProt top hitse value%identityAlignment
Q0IH86 Structure-specific endonuclease subunit slx15.2e-2638.31Show/hide
Query:  EENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVFCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGIA
        E  GF+  YLL    P+YKG  YIGFTVNP+RRI+QHN G+ + GAW+T  + PW+MV  ++GFP +++AL+FEWAWQHP+ S  +       K  S   
Subjt:  EENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVFCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGIA

Query:  NKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELP
          + +   ML +  W  L +T+ +   +Y          P HM +    +   P
Subjt:  NKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELP

Q32PI0 Structure-specific endonuclease subunit SLX11.6e-2740.69Show/hide
Query:  FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVFCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGIANKIK
        FF  YLL    PR++G  Y+GFTVNP RR++QHN G  + GAWRT  + PWEMV  ++GFP+ V+AL+FEWAWQHP  S  +       +  +  A  ++
Subjt:  FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVFCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGIANKIK

Query:  LAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSP
        +   ML  P W  L +T+ +    +  +   CP  P HM +   P
Subjt:  LAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSP

Q5PQP5 Structure-specific endonuclease subunit SLX13.0e-2939.51Show/hide
Query:  FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVFCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGIANKIK
        FF  YLL    PR++G  Y+GFTVNP RR+RQHN G  + GAWRT  + PW+MV  ++GFP+ V+AL+FEWAWQHP  S  +       +S +     ++
Subjt:  FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVFCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGIANKIK

Query:  LAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSP------IDELPCYSEGD
        +   ML +P W  L +TV +    + +    CP+ P HM +   P      + + P  SE D
Subjt:  LAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSP------IDELPCYSEGD

Q8BX32 Structure-specific endonuclease subunit SLX16.0e-3040.12Show/hide
Query:  FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVFCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGIANKIK
        FF  YLL    PR++G  Y+GFTVNP RR+RQHN G  + GAWRT  + PW+MV  I+GFP+ V+AL+FEWAWQHP  S  +       +S +  A  ++
Subjt:  FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVFCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGIANKIK

Query:  LAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSP------IDELPCYSEGD
        +   ML +P W  L +T+ +    + +    CP+ P HM +   P      + + P  SE D
Subjt:  LAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSP------IDELPCYSEGD

Q9BQ83 Structure-specific endonuclease subunit SLX11.2e-2539.31Show/hide
Query:  FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVFCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGIANKIK
        FF  YLL    PRY+G  Y+GFTVN  RR++QHN G  + GAWRT  + PWEMV  ++GFP++V+AL+FEWAWQHP+ S  +       +  +  A  ++
Subjt:  FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVFCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGIANKIK

Query:  LAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSP
        +   ML  P W  L +T+ +       +   C   P H+ +   P
Subjt:  LAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSP

Arabidopsis top hitse value%identityAlignment
AT2G30350.1 Excinuclease ABC, C subunit, N-terminal3.0e-3738.05Show/hide
Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSE-GDRCVLENEDD
        LQFEWAWQHP ES+AVR AAA FKS SG+A+KIKL YTML LPAW SLN+TVNYFS+KY ++    PSLP HM+VQV  +++L  +++  D    E+E+ 
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSE-GDRCVLENEDD

Query:  WEYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELE--------DNEQMPHSSCTPSYIDVSVSYDLRGCDEQ-----KPALCA
         E N E ++  D    +L ++  N    +  D        P  +   ++ L         D E+        S+I V     +R  +++        L +
Subjt:  WEYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDGRPHELRGSDEELE--------DNEQMPHSSCTPSYIDVSVSYDLRGCDEQ-----KPALCA

Query:  QPCIVEGRTEIIIDDGEENHLEGSGTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVITGRSEIIDLTKSPTFIQ
          C   G  EI+ D  E +H     T+  ++  RK  + I +  +E       V+ EVID+ TPSP CR  S   +RRV    SE IDLT SP FI+
Subjt:  QPCIVEGRTEIIIDDGEENHLEGSGTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVITGRSEIIDLTKSPTFIQ

AT2G30350.2 Excinuclease ABC, C subunit, N-terminal2.8e-7545.84Show/hide
Query:  EDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFK
        ED   G +  GFF+CYLL S  PR+KG TYIGFTVNP+RRIRQHNGEI  GAWRTK+KRPWEMV CIYGFPTNVSALQFEWAWQHP ES+AVR AAA FK
Subjt:  EDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFK

Query:  SLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSE-GDRCVLENEDDWEYNREYEEVCDSQVHDLMTEVPN
        S SG+A+KIKL YTML LPAW SLN+TVNYFS+KY ++    PSLP HM+VQV  +++L  +++  D    E+E+  E N E ++  D    +L ++  N
Subjt:  SLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSE-GDRCVLENEDDWEYNREYEEVCDSQVHDLMTEVPN

Query:  EIPQTLMDYQTGTDGRPHELRGSDEELE--------DNEQMPHSSCTPSYIDVSVSYDLRGCDEQ-----KPALCAQPCIVEGRTEIIIDDGEENHLEGS
            +  D        P  +   ++ L         D E+        S+I V     +R  +++        L +  C   G  EI+ D  E +H    
Subjt:  EIPQTLMDYQTGTDGRPHELRGSDEELE--------DNEQMPHSSCTPSYIDVSVSYDLRGCDEQ-----KPALCAQPCIVEGRTEIIIDDGEENHLEGS

Query:  GTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVITGRSEIIDLTKSPTFIQ
         T+  ++  RK  + I +  +E       V+ EVID+ TPSP CR  S   +RRV    SE IDLT SP FI+
Subjt:  GTKLQQQPGRKNLSGIATEISEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVITGRSEIIDLTKSPTFIQ

AT5G43210.1 Excinuclease ABC, C subunit, N-terminal8.6e-0841.67Show/hide
Query:  FSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSALQFEWAWQ
        +S YL+ S     K  TY+G T +  RR++QHNGEIR GA  +   RPW     I GF     A  FE  W+
Subjt:  FSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSALQFEWAWQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGAGGAGGAAAGAGAAGCCGGAAATCCCTAAAACCATGGCTGTTGCAGAGGAGAAGAAGGAAGACGATGAAGATGAAGAAAGGGGTAACGAAGAGAACGGTTTCTT
TTCGTGCTATCTCTTGGCCTCTGCGTGCCCTCGTTACAAAGGCCATACCTATATTGGATTCACAGTGAACCCTAAACGTAGAATCAGACAGCACAACGGCGAAATTAGAT
GCGGTGCGTGGCGAACTAAGAGGAAGAGACCTTGGGAGATGGTGTTCTGCATCTACGGCTTCCCCACCAATGTCTCTGCTCTTCAGTTTGAATGGGCCTGGCAGCATCCT
AATGAGTCATTGGCCGTAAGAAGTGCTGCTGCAACTTTCAAGTCTCTATCTGGAATTGCCAACAAAATTAAACTTGCATACACAATGCTCACACTTCCAGCTTGGTGTAG
TTTGAATATTACTGTAAACTACTTCTCAACAAAGTACATGAATAATGCGGCTGGTTGCCCAAGTTTGCCAGGGCATATGAGGGTCCAAGTTTCCCCCATCGATGAGCTCC
CATGCTATTCCGAAGGAGATCGATGTGTGCTTGAAAATGAAGATGACTGGGAGTATAATAGAGAATATGAAGAAGTTTGTGATTCTCAAGTACATGATTTGATGACTGAA
GTTCCAAATGAAATTCCTCAAACGTTGATGGATTACCAGACAGGTACAGATGGAAGACCTCATGAATTGCGTGGATCCGATGAAGAACTAGAGGACAATGAACAAATGCC
ACATTCTTCGTGTACTCCTTCTTATATTGATGTCAGTGTGTCTTATGACTTGCGTGGATGTGATGAACAAAAGCCAGCTTTGTGTGCTCAGCCTTGTATTGTAGAAGGTA
GGACTGAAATCATCATCGATGATGGAGAGGAAAACCATTTAGAAGGGAGTGGTACGAAATTGCAGCAGCAACCTGGTAGGAAGAACTTATCAGGAATAGCTACTGAAATC
AGCGAAGTTTCATATGGGCTTCCTCCTGTTGAGAATGAGGTTATAGACGTGTCTACCCCGTCTCCCGACTGCAGAACAAGTTCGTATAAATTCAAGAGAAGAGTTATTAC
TGGTAGGTCTGAGATTATTGACTTGACTAAATCTCCTACGTTTATCCAATTATAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGAGGAGGAAAGAGAAGCCGGAAATCCCTAAAACCATGGCTGTTGCAGAGGAGAAGAAGGAAGACGATGAAGATGAAGAAAGGGGTAACGAAGAGAACGGTTTCTT
TTCGTGCTATCTCTTGGCCTCTGCGTGCCCTCGTTACAAAGGCCATACCTATATTGGATTCACAGTGAACCCTAAACGTAGAATCAGACAGCACAACGGCGAAATTAGAT
GCGGTGCGTGGCGAACTAAGAGGAAGAGACCTTGGGAGATGGTGTTCTGCATCTACGGCTTCCCCACCAATGTCTCTGCTCTTCAGTTTGAATGGGCCTGGCAGCATCCT
AATGAGTCATTGGCCGTAAGAAGTGCTGCTGCAACTTTCAAGTCTCTATCTGGAATTGCCAACAAAATTAAACTTGCATACACAATGCTCACACTTCCAGCTTGGTGTAG
TTTGAATATTACTGTAAACTACTTCTCAACAAAGTACATGAATAATGCGGCTGGTTGCCCAAGTTTGCCAGGGCATATGAGGGTCCAAGTTTCCCCCATCGATGAGCTCC
CATGCTATTCCGAAGGAGATCGATGTGTGCTTGAAAATGAAGATGACTGGGAGTATAATAGAGAATATGAAGAAGTTTGTGATTCTCAAGTACATGATTTGATGACTGAA
GTTCCAAATGAAATTCCTCAAACGTTGATGGATTACCAGACAGGTACAGATGGAAGACCTCATGAATTGCGTGGATCCGATGAAGAACTAGAGGACAATGAACAAATGCC
ACATTCTTCGTGTACTCCTTCTTATATTGATGTCAGTGTGTCTTATGACTTGCGTGGATGTGATGAACAAAAGCCAGCTTTGTGTGCTCAGCCTTGTATTGTAGAAGGTA
GGACTGAAATCATCATCGATGATGGAGAGGAAAACCATTTAGAAGGGAGTGGTACGAAATTGCAGCAGCAACCTGGTAGGAAGAACTTATCAGGAATAGCTACTGAAATC
AGCGAAGTTTCATATGGGCTTCCTCCTGTTGAGAATGAGGTTATAGACGTGTCTACCCCGTCTCCCGACTGCAGAACAAGTTCGTATAAATTCAAGAGAAGAGTTATTAC
TGGTAGGTCTGAGATTATTGACTTGACTAAATCTCCTACGTTTATCCAATTATAGAACGATGGAACGTGGGCTCAAATTTGGTTGACCAAATAGAGGGGGGAACAATAAC
ATGTTGTTAAGTTATACATAATGGCCTTTTTTTCAAAGGCCATTTTAAGGGGATCAAGTGTGAAAAGAACATTAGAATGGCTTCTGTTCTATAGAACGTGGTATCAATTA
ACTTGTTCCAAATGAGATCGGACTTGGAACTATAACTAGTTATCTTCTTCTTTGGGTCAAAACATTTATCTTCTCATAGTAATCTTTTGTTACTATTGGTTTGGTTACCG
AAACTCGAGACATGGTTAGGTTAGACTGGACTTCGTCTGTCTGTCTCTTAGCTCAAACTGTTTTGTTTTGTTTTGTTTCTGTGTTCTTCCTCCATAGCTTTCTAATTTTA
TTAGTTTTTTGGAATCTGAGTTTATTATAAAACCAATAAGGATCAGATTTCCCACTATGATGG
Protein sequenceShow/hide protein sequence
MRRRKEKPEIPKTMAVAEEKKEDDEDEERGNEENGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSALQFEWAWQHP
NESLAVRSAAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVSPIDELPCYSEGDRCVLENEDDWEYNREYEEVCDSQVHDLMTE
VPNEIPQTLMDYQTGTDGRPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQKPALCAQPCIVEGRTEIIIDDGEENHLEGSGTKLQQQPGRKNLSGIATEI
SEVSYGLPPVENEVIDVSTPSPDCRTSSYKFKRRVITGRSEIIDLTKSPTFIQL