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Carg26964 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26964
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPesticidal crystal cry8Ba protein
Genome locationCarg_Chr01:11399363..11400904
RNA-Seq ExpressionCarg26964
SyntenyCarg26964
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3975432.1 hypothetical protein CMV_001322 [Castanea mollissima]5.3e-0550Show/hide
Query:  MFTDGLDKVAFDGIREKEVPLSDPSLAIERVPEQG-------GLGLPPPSKFRS-DICRDAIPLSRADVG
        MFTDGLDK A   +REKEV LS+ ++     P  G       G GLPPPSKFRS  +  +AIP+SR   G
Subjt:  MFTDGLDKVAFDGIREKEVPLSDPSLAIERVPEQG-------GLGLPPPSKFRS-DICRDAIPLSRADVG

KAG4382879.1 hypothetical protein GLYMA_14G180600v4 [Glycine max]7.0e-0547.14Show/hide
Query:  MFTDGLDKVAFDGIREKEVPLSDPSLAIERVPEQG-------GLGLPPPSKFRS-DICRDAIPLSRADVG
        MFT+GLD+ A   +REKEVP S+ +L     P  G       G GLPPPSKFRS  +  +AIP+S   +G
Subjt:  MFTDGLDKVAFDGIREKEVPLSDPSLAIERVPEQG-------GLGLPPPSKFRS-DICRDAIPLSRADVG

KAG7037619.1 hypothetical protein SDJN02_01248 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-59100Show/hide
Query:  MFTDGLDKVAFDGIREKEVPLSDPSLAIERVPEQGGLGLPPPSKFRSDICRDAIPLSRADVGGGHRQWPKGLRAAKWKVSDDDVKMTFPWQPPFCASSNE
        MFTDGLDKVAFDGIREKEVPLSDPSLAIERVPEQGGLGLPPPSKFRSDICRDAIPLSRADVGGGHRQWPKGLRAAKWKVSDDDVKMTFPWQPPFCASSNE
Subjt:  MFTDGLDKVAFDGIREKEVPLSDPSLAIERVPEQGGLGLPPPSKFRSDICRDAIPLSRADVGGGHRQWPKGLRAAKWKVSDDDVKMTFPWQPPFCASSNE

Query:  LNKCPENAKT
        LNKCPENAKT
Subjt:  LNKCPENAKT

PON70494.1 pesticidal crystal cry8Ba protein [Trema orientale]2.4e-0551.52Show/hide
Query:  MFTDGLDKVAFDGIREKEVPLSDPSLAIE-------RVPEQGGLGLPPPSKFRS-DICRDAIPLSR
        MFT+GLD+ A   +REKEVPLS  +L          R   +GG GLPPPSKFRS  +   AIP+SR
Subjt:  MFTDGLDKVAFDGIREKEVPLSDPSLAIE-------RVPEQGGLGLPPPSKFRS-DICRDAIPLSR

TKY56317.1 hypothetical protein E2542_SST20760 [Spatholobus suberectus]3.1e-0549.25Show/hide
Query:  MFTDGLDKVAFDGIREKEVPLSDPSLAIERVPEQG-------GLGLPPPSKFRS-DICRDAIPLSRA
        MFT+GLDK A   +REKEVP+S+ +L     P  G       G GLPPP+KFRS  +  +AIP+S A
Subjt:  MFTDGLDKVAFDGIREKEVPLSDPSLAIERVPEQG-------GLGLPPPSKFRS-DICRDAIPLSRA

TrEMBL top hitse value%identityAlignment
A0A2N9FHJ8 Uncharacterized protein2.6e-0548.57Show/hide
Query:  MFTDGLDKVAFDGIREKEVPLSDPSLAIERVPEQG-------GLGLPPPSKFRS-DICRDAIPLSRADVG
        MFT+GLDK A   +REK+VPLS  ++     P  G       G+GLPPPSKFRS  +  +AIP+SR   G
Subjt:  MFTDGLDKVAFDGIREKEVPLSDPSLAIERVPEQG-------GLGLPPPSKFRS-DICRDAIPLSRADVG

A0A2N9FLK6 Glucose-6-phosphate isomerase2.6e-0548.57Show/hide
Query:  MFTDGLDKVAFDGIREKEVPLSDPSLAIERVPEQG-------GLGLPPPSKFRS-DICRDAIPLSRADVG
        MFT+GLDK A   +REK+VPLS  ++     P  G       G+GLPPPSKFRS  +  +AIP+SR   G
Subjt:  MFTDGLDKVAFDGIREKEVPLSDPSLAIERVPEQG-------GLGLPPPSKFRS-DICRDAIPLSRADVG

A0A2P5CQX8 Pesticidal crystal cry8Ba protein3.4e-0550Show/hide
Query:  MFTDGLDKVAFDGIREKEVPLSDPSLAIE-------RVPEQGGLGLPPPSKFRS-DICRDAIPLSR
        MFT+GLD+ A   +REKEVPLS  +L          R   +GG GLPPPSKFRS  +    IP+SR
Subjt:  MFTDGLDKVAFDGIREKEVPLSDPSLAIE-------RVPEQGGLGLPPPSKFRS-DICRDAIPLSR

A0A2P5DB28 Pesticidal crystal cry8Ba protein1.2e-0551.52Show/hide
Query:  MFTDGLDKVAFDGIREKEVPLSDPSLAIE-------RVPEQGGLGLPPPSKFRS-DICRDAIPLSR
        MFT+GLD+ A   +REKEVPLS  +L          R   +GG GLPPPSKFRS  +   AIP+SR
Subjt:  MFTDGLDKVAFDGIREKEVPLSDPSLAIE-------RVPEQGGLGLPPPSKFRS-DICRDAIPLSR

K7M7S3 Uncharacterized protein3.4e-0547.14Show/hide
Query:  MFTDGLDKVAFDGIREKEVPLSDPSLAIERVPEQG-------GLGLPPPSKFRS-DICRDAIPLSRADVG
        MFT+GLD+ A   +REKEVP S+ +L     P  G       G GLPPPSKFRS  +  +AIP+S   +G
Subjt:  MFTDGLDKVAFDGIREKEVPLSDPSLAIERVPEQG-------GLGLPPPSKFRS-DICRDAIPLSRADVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTACCGACGGACTTGATAAAGTTGCCTTCGATGGGATTCGCGAGAAGGAAGTACCTCTCAGCGATCCATCACTGGCAATAGAGCGGGTACCGGAGCAAGGGGGTTT
GGGATTGCCACCGCCGTCGAAATTCAGAAGTGACATTTGCCGGGATGCGATTCCATTGTCGAGGGCAGACGTTGGTGGGGGTCATAGGCAATGGCCGAAAGGATTGAGAG
CTGCAAAATGGAAGGTTTCAGACGACGATGTCAAGATGACTTTCCCATGGCAGCCTCCTTTTTGTGCTTCTTCGAATGAATTAAACAAATGCCCCGAAAACGCCAAGACG
TGA
mRNA sequenceShow/hide mRNA sequence
GGGTTTCAGAGCTAAAAAGCTTGCTGTATAAGCAAATTTTGTCTCCACTTTTTCTTCAATCTCGTACTCGTTTTCCCTTCTGTGATCTTCTCTTCTCTTCTGTTCATCGC
AATCTGCGTGATTACCGAGCGGCATTGCCTTTTTTGCGAAGTTTTTTTTGTTGTTCTTCGTGCAGTGAGCTCTGAGGTTCGATCTAATGTGAGTTCCTGGTAATTTCTGA
ACTCTGATTTGAGATTTGATTTCGCGGTTGTGAGATTAGGAGGTTGAAAGGGAGGTAGATGTTTACCGACGGACTTGATAAAGTTGCCTTCGATGGGATTCGCGAGAAGG
AAGTACCTCTCAGCGATCCATCACTGGCAATAGAGCGGGTACCGGAGCAAGGGGGTTTGGGATTGCCACCGCCGTCGAAATTCAGAAGTGACATTTGCCGGGATGCGATT
CCATTGTCGAGGGCAGACGTTGGTGGGGGTCATAGGCAATGGCCGAAAGGATTGAGAGCTGCAAAATGGAAGGTTTCAGACGACGATGTCAAGATGACTTTCCCATGGCA
GCCTCCTTTTTGTGCTTCTTCGAATGAATTAAACAAATGCCCCGAAAACGCCAAGACGTGAAGCTTGACGGCGCACATATCGTAAAAACTCCGTCTGGGTTGAATTGCAG
AATGGGAAGAAGGAGCGTGACCAGTTTGTGAGGTTGGTTTTTGAACCAGTTGACCGTTTGAACTTGCAGCACGAAAATTTCCCATTAGAACTGTCTAAATAAATGACAGC
CAATCATTGTATTTCATTAACATTTCATTGTTACGATGTATTGTTCGTTCTAAAAGTTGGATTGGAATGTTATCATCTCCTGCTCTATTGCAGACCTGTACATTGGAAGC
TGC
Protein sequenceShow/hide protein sequence
MFTDGLDKVAFDGIREKEVPLSDPSLAIERVPEQGGLGLPPPSKFRSDICRDAIPLSRADVGGGHRQWPKGLRAAKWKVSDDDVKMTFPWQPPFCASSNELNKCPENAKT