CuGenDBv2

Gene ID	Carg26972
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	t-SNARE coiled-coil homology domain-containing protein
Genome location	Carg_Chr01:11349877..11352840
RNA-Seq Expression	Carg26972
Synteny	Carg26972
Gene Ontology terms	GO:0015031 - protein transport (biological process) GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domains	IPR000727 - Target SNARE coiled-coil homology domain IPR039897 - BET1-like protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004136265.1 bet1-like protein At1g29060 [Cucumis sativus]

3.4e-62

93.38

Show/hide

Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSSFYNGDAA +RSREGLSTRPAA+SDEIQLQIDPMQGDLDD+IVGLH QVKRLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSK+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK

XP_008466185.1 PREDICTED: bet1-like protein At1g29060 [Cucumis melo]

4.1e-63

93.38

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Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSSFYNGDAAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDD+IVGLH QVKRLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK
        LNKKIIQNGSNHV+QVVVFALICFFIVYMW+K+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK

XP_022940948.1 bet1-like protein At1g29060 [Cucurbita moschata]

7.9e-67

100

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Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK

XP_022980898.1 bet1-like protein At1g29060 [Cucurbita maxima]

1.8e-66

99.26

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Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MASNSYRGGSSFYNGDAAPYRSREGLSTRP+AASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK

XP_038896659.1 bet1-like protein At1g29060 [Benincasa hispida]

7.7e-62

93.38

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Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSSFYN +AA YRSREGLSTRPAAASDEIQLQIDPMQGDLDD+IVGLH QVKRLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISR+
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LHL4 t-SNARE coiled-coil homology domain-containing protein

1.7e-62

93.38

Show/hide

Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSSFYNGDAA +RSREGLSTRPAA+SDEIQLQIDPMQGDLDD+IVGLH QVKRLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSK+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK

A0A1S3CQM7 bet1-like protein At1g29060

2.0e-63

93.38

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Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSSFYNGDAAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDD+IVGLH QVKRLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK
        LNKKIIQNGSNHV+QVVVFALICFFIVYMW+K+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK

A0A5A7TAQ3 Bet1-like protein

2.0e-63

93.38

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Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSSFYNGDAAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDD+IVGLH QVKRLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK
        LNKKIIQNGSNHV+QVVVFALICFFIVYMW+K+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK

A0A6J1FQQ6 bet1-like protein At1g29060

3.8e-67

100

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Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK

A0A6J1J0M1 bet1-like protein At1g29060

8.6e-67

99.26

Show/hide

Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MASNSYRGGSSFYNGDAAPYRSREGLSTRP+AASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK

SwissProt top hits

e value

%identity

Alignment

Q8L9S0 Bet1-like protein At1g29060

4.7e-46

68.38

Show/hide

Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MASN   GGS +  G A PYRSREGLSTR A+ S+EIQL+IDPM  DLDD+I+GLHGQV++L+NIAQEIG+EAKSQ+DFLD+LQMTLI+AQAGVKNN+R+
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK
        LN  II++G+NH++ VV+FAL+ FFI+YMWSK+ ++
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK

Q8VXX9 Bet1-like protein At4g14600

6.1e-46

67.39

Show/hide

Query:  MASNSYRGGS--SFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNV
        MASN +R G+  S Y G AAPYRSREGLSTR AA S+EIQL+IDPM  DLDD+I GLHGQV++L+NIAQEIG+EAK Q+DFLD+LQMTLI+AQAGVKNN+
Subjt:  MASNSYRGGS--SFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNV

Query:  RRLNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK
        R+LN  II++G+NH++ VV+FAL+ FF++Y+WSK+ ++
Subjt:  RRLNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK

Arabidopsis top hits

e value

%identity

Alignment

AT1G29060.1 Target SNARE coiled-coil domain protein

3.3e-47

68.38

Show/hide

Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MASN   GGS +  G A PYRSREGLSTR A+ S+EIQL+IDPM  DLDD+I+GLHGQV++L+NIAQEIG+EAKSQ+DFLD+LQMTLI+AQAGVKNN+R+
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK
        LN  II++G+NH++ VV+FAL+ FFI+YMWSK+ ++
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK

AT4G14600.1 Target SNARE coiled-coil domain protein

4.4e-47

67.39

Show/hide

Query:  MASNSYRGGS--SFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNV
        MASN +R G+  S Y G AAPYRSREGLSTR AA S+EIQL+IDPM  DLDD+I GLHGQV++L+NIAQEIG+EAK Q+DFLD+LQMTLI+AQAGVKNN+
Subjt:  MASNSYRGGS--SFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNV

Query:  RRLNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK
        R+LN  II++G+NH++ VV+FAL+ FF++Y+WSK+ ++
Subjt:  RRLNKKIIQNGSNHVVQVVVFALICFFIVYMWSKISRK

Sequences

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CDS sequence

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ATGGCGTCTAATTCGTATCGTGGCGGTAGTTCCTTCTACAACGGCGATGCCGCTCCTTATCGTTCCAGGGAGGGGCTTAGCACGAGACCGGCGGCTGCTTCCGATGAAAT
TCAACTACAGATCGATCCGATGCAAGGGGACTTGGACGACCAGATCGTTGGTCTCCATGGCCAGGTTAAAAGGCTGAGAAATATTGCTCAAGAAATTGGAACAGAAGCAA
AATCCCAGCAAGATTTTCTAGATCAGTTGCAAATGACGTTGATCAAAGCTCAAGCGGGAGTGAAGAACAACGTAAGAAGATTGAACAAAAAAATCATACAGAACGGATCA
AATCATGTCGTCCAGGTCGTCGTATTTGCATTGATCTGTTTCTTTATAGTGTATATGTGGTCGAAAATATCCCGAAAATGA

mRNA sequence

Show/hide mRNA sequence

AAACGCCAACGCGTTAACGGGAGTCGGAAAAATCCCAATTTGCTTCGCGCTCTCACCTTCCGACTCAGATTGAAGATACTGAAATTGATTCTCGCTATTCGTCTCTTTCC
GATCCAATTCTTTCCTTTTGGATTAGGTTTTCATTCTGTCTTCAATGGCGTCTAATTCGTATCGTGGCGGTAGTTCCTTCTACAACGGCGATGCCGCTCCTTATCGTTCC
AGGGAGGGGCTTAGCACGAGACCGGCGGCTGCTTCCGATGAAATTCAACTACAGATCGATCCGATGCAAGGGGACTTGGACGACCAGATCGTTGGTCTCCATGGCCAGGT
TAAAAGGCTGAGAAATATTGCTCAAGAAATTGGAACAGAAGCAAAATCCCAGCAAGATTTTCTAGATCAGTTGCAAATGACGTTGATCAAAGCTCAAGCGGGAGTGAAGA
ACAACGTAAGAAGATTGAACAAAAAAATCATACAGAACGGATCAAATCATGTCGTCCAGGTCGTCGTATTTGCATTGATCTGTTTCTTTATAGTGTATATGTGGTCGAAA
ATATCCCGAAAATGAATGCTTCCCTACCAGTTGCTGGCCAGTGACGAAGGAAAAGAAACAGG

Protein sequence

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MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGS
NHVVQVVVFALICFFIVYMWSKISRK

Carg26972 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome