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Carg26992 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26992
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGibberellin regulated protein
Genome locationCarg_Chr11:9010365..9011856
RNA-Seq ExpressionCarg26992
SyntenyCarg26992
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACU13365.1 unknown [Glycine max]9.2e-1650.57Show/hide
Query:  QILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP
        ++      L  L+LS+S  E +MAG+  C+  C KRCS A +K +CMKFC ICCGKC CVP G YG +H CPCY  +   +G+AKCP
Subjt:  QILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP

KAA0044354.1 peamaclein-like [Cucumis melo var. makuwa]4.1e-1654.43Show/hide
Query:  LCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP
        LCFLL ++SF++T  A    C + C+KRCS A +K +CMK+C ICCG CKCVP G YG +H CPCY  + + +GR KCP
Subjt:  LCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP

KAG6588701.1 Snakin-1, partial [Cucurbita argyrosperma subsp. sororia]5.7e-34100Show/hide
Query:  METAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVPGAYGKRHCPCYSHVHTLRGRAKCP
        METAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVPGAYGKRHCPCYSHVHTLRGRAKCP
Subjt:  METAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVPGAYGKRHCPCYSHVHTLRGRAKCP

KAG7022485.1 Snakin-1 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-45100Show/hide
Query:  MRGQILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVPGAYGKRHCPCYSHVHTLRGRAKCP
        MRGQILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVPGAYGKRHCPCYSHVHTLRGRAKCP
Subjt:  MRGQILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVPGAYGKRHCPCYSHVHTLRGRAKCP

XP_027905210.1 peamaclein-like [Vigna unguiculata]1.6e-1549.43Show/hide
Query:  QILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYG-KRHCPCYSHVHTLRGRAKCP
        +++     L FL+LS+SFME +MAG++ C   C KRC+ A +K+ C+KFC ICC KC CVP G YG K  CPCY  +   +G++KCP
Subjt:  QILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYG-KRHCPCYSHVHTLRGRAKCP

TrEMBL top hitse value%identityAlignment
A0A0A0K2Z1 Uncharacterized protein1.3e-3680.68Show/hide
Query:  MRGQILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVPGAYGKRHCPCYSHVHTLRGRAKCP
        MR  +L++G F CFLLLSASFM+TAMA +D CTRPCRKRCS AKLKR+CMK+CRICC KCKCVPG YGKRHCPCYSHVHT+RGRAKCP
Subjt:  MRGQILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVPGAYGKRHCPCYSHVHTLRGRAKCP

A0A4D6NSV8 Gibberellin regulated protein7.6e-1649.43Show/hide
Query:  QILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYG-KRHCPCYSHVHTLRGRAKCP
        +++     L FL+LS+SFME +MAG++ C   C KRC+ A +K+ C+KFC ICC KC CVP G YG K  CPCY  +   +G++KCP
Subjt:  QILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYG-KRHCPCYSHVHTLRGRAKCP

A0A5D3E0A6 Peamaclein-like2.0e-1654.43Show/hide
Query:  LCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP
        LCFLL ++SF++T  A    C + C+KRCS A +K +CMK+C ICCG CKCVP G YG +H CPCY  + + +GR KCP
Subjt:  LCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP

A0A5N6QLL9 Uncharacterized protein1.3e-1551.72Show/hide
Query:  QILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP
        ++L     LC LLLS+SF+E  MA +  CT  C  RCS A +K +CMK+C ICC +CKCVP G YG +H CPCY      +G+AKCP
Subjt:  QILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP

C6SVU2 Uncharacterized protein4.4e-1650.57Show/hide
Query:  QILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP
        ++      L  L+LS+S  E +MAG+  C+  C KRCS A +K +CMKFC ICCGKC CVP G YG +H CPCY  +   +G+AKCP
Subjt:  QILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP

SwissProt top hitse value%identityAlignment
C0HLQ1 Cypmaclein6.0e-1047.46Show/hide
Query:  CTRPCRKRCSHAKLKRKCMKFCRICCGKCKCV-PGAYGKR-HCPCYSHVHTLRGRAKCP
        C + C +RCS A    +C+K+C ICC KC CV PG YG    CPCY+++   +G  KCP
Subjt:  CTRPCRKRCSHAKLKRKCMKFCRICCGKCKCV-PGAYGKR-HCPCYSHVHTLRGRAKCP

O80641 Gibberellin-regulated protein 85.4e-1141.38Show/hide
Query:  QILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYG-KRHCPCYSHVHTLRGRAKCP
        ++++V  F+  LLL++SF   + A +  C   C  RCS A    +C+K+C ICC KC CVP G +G K  CPCY  +   +G +KCP
Subjt:  QILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYG-KRHCPCYSHVHTLRGRAKCP

P86888 Peamaclein2.7e-1047.62Show/hide
Query:  GADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYG-KRHCPCYSHVHTLRGRAKCP
        G+  C   C  RCS A  + +C+K+C ICC KC CVP G YG K  CPCY  +   +G  KCP
Subjt:  GADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYG-KRHCPCYSHVHTLRGRAKCP

Q84J95 Gibberellin-regulated protein 57.8e-1043.37Show/hide
Query:  LCFLLLSASFMETAMAGADV----CTRPCRKRCSHAKLKRKCMKFCRICCGKCKCV-PGAYG-KRHCPCYSHVHTLRGRAKCP
        L FLL  ++ ++ A  G  +    C   C  RCS    K+ CM FC  CC KC CV PG +G K+ CPCY++  T  GR KCP
Subjt:  LCFLLLSASFMETAMAGADV----CTRPCRKRCSHAKLKRKCMKFCRICCGKCKCV-PGAYG-KRHCPCYSHVHTLRGRAKCP

Q948Z4 Snakin-16.2e-1542.53Show/hide
Query:  QILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP
        ++ ++   L  L+++ S ++T MAG+  C   C+ RCS A L  +C+K+C ICC +CKCVP G YG +H CPCY      +G++KCP
Subjt:  QILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP

Arabidopsis top hitse value%identityAlignment
AT1G74670.1 Gibberellin-regulated family protein9.5e-1150.85Show/hide
Query:  CTRPCRKRCSHAKLKRKCMKFCRICCGKCKCV-PGAYG-KRHCPCYSHVHTLRGRAKCP
        C   C +RCS+ K  + CM FC+ CC KC CV PG YG K+ CPCY++  T +G  KCP
Subjt:  CTRPCRKRCSHAKLKRKCMKFCRICCGKCKCV-PGAYG-KRHCPCYSHVHTLRGRAKCP

AT2G30810.1 Gibberellin-regulated family protein1.0e-0947.46Show/hide
Query:  CTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYG-KRHCPCYSHVHTLRGRAKCP
        C + C  RCS    ++ C+ FC  CC KC CVP G YG K  CPCY++  T  G  KCP
Subjt:  CTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYG-KRHCPCYSHVHTLRGRAKCP

AT2G39540.1 Gibberellin-regulated family protein3.8e-1241.38Show/hide
Query:  QILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYG-KRHCPCYSHVHTLRGRAKCP
        ++++V  F+  LLL++SF   + A +  C   C  RCS A    +C+K+C ICC KC CVP G +G K  CPCY  +   +G +KCP
Subjt:  QILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVP-GAYG-KRHCPCYSHVHTLRGRAKCP

AT3G02885.1 GAST1 protein homolog 55.6e-1143.37Show/hide
Query:  LCFLLLSASFMETAMAGADV----CTRPCRKRCSHAKLKRKCMKFCRICCGKCKCV-PGAYG-KRHCPCYSHVHTLRGRAKCP
        L FLL  ++ ++ A  G  +    C   C  RCS    K+ CM FC  CC KC CV PG +G K+ CPCY++  T  GR KCP
Subjt:  LCFLLLSASFMETAMAGADV----CTRPCRKRCSHAKLKRKCMKFCRICCGKCKCV-PGAYG-KRHCPCYSHVHTLRGRAKCP

AT3G10185.1 Gibberellin-regulated family protein1.8e-0940.23Show/hide
Query:  LIVGCFLCFLLLSASFMETAMAGADV--CTRPCRKRCSHAKLKRKCMKFCRICCGKCKCV-PGAYG-KRHCPCYSHVHTLRGRAKCP
        L++   + FL+   +  ET  A   +  C   C  RCS+ + K+ C+ FC  CC KC CV PG YG K+ CPCY++  T  G  KCP
Subjt:  LIVGCFLCFLLLSASFMETAMAGADV--CTRPCRKRCSHAKLKRKCMKFCRICCGKCKCV-PGAYG-KRHCPCYSHVHTLRGRAKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGTCAGATCTTGATTGTGGGTTGCTTCTTATGTTTTCTTCTCTTAAGTGCTTCTTTCATGGAAACCGCCATGGCCGGCGCAGACGTGTGCACGAGACCGTGCAG
GAAGAGGTGCTCGCATGCGAAGCTGAAGCGTAAGTGCATGAAGTTTTGCAGAATATGTTGCGGTAAGTGCAAGTGTGTGCCGGGGGCTTATGGGAAGCGCCACTGCCCTT
GCTATAGCCATGTGCACACCCTTAGGGGCAGGGCCAAGTGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
TAAATTTTAATTTTAAAAGTAGGGTCGGGTAGGATTAGATTGTAATACTAATTTTAAATTGACTGACGCTCGCTCAGCGTCGTCTTGTTTAAAAACACGGAGCGTGAGAA
GTGAGTGTAGTGTCTGAGGATTGGTTCGTGGTGTTGAAAGGAAGAAGATGAGAGGTCAGATCTTGATTGTGGGTTGCTTCTTATGTTTTCTTCTCTTAAGTGCTTCTTTC
ATGGAAACCGCCATGGCCGGCGCAGACGTGTGCACGAGACCGTGCAGGAAGAGGTGCTCGCATGCGAAGCTGAAGCGTAAGTGCATGAAGTTTTGCAGAATATGTTGCGG
TAAGTGCAAGTGTGTGCCGGGGGCTTATGGGAAGCGCCACTGCCCTTGCTATAGCCATGTGCACACCCTTAGGGGCAGGGCCAAGTGCCCTTGATTTTAAGGCCATTGTG
GCATTGTCCAAGAGACCAAATAATTTTGTGTTTGAATTTGAGTATTAAAGGTTGAAAGTTTGTGAGTGAAGTTTGGTTGGTTTGATAAACAATGTGTATTTATGGTATGT
AACTAAGAAATGTAATGCTGTTTGGGCTTTTATTCGATAAGAATCATAAGAATGTTATTTTTTTTCCGGTCT
Protein sequenceShow/hide protein sequence
MRGQILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVPGAYGKRHCPCYSHVHTLRGRAKCP